Click here to switch to the map view.

The map label for this gene is 159897110

Identifier: 159897110

GI number: 159897110

Start: 669016

End: 669987

Strand: Reverse

Name: 159897110

Synonym: Haur_0581

Alternate gene names: NA

Gene position: 669987-669016 (Counterclockwise)

Preceding gene: 159897112

Following gene: 159897109

Centisome position: 10.56

GC content: 43.93

Gene sequence:

>972_bases
ATGCTTGCACAATATCAGCGAGCCTTCGAAAAACTTAAGCTATCGCCATCACAAGCTTGGCCTGAAAGCACCCATTTTCG
TGCGCCCTATAAACCATTGATGCTACTTGCGGTTAGCGATCTGATTTCGGTTGGTACACTCACGCATAATTTTATCGAGT
ATTCGGAGTTTTTGCTTGAAACCTTTGACCGATATTGGCGCATTATTTTTGATTCAACAAAGTTTGCCAATCCGATTCAG
CCATTTTTCTACCTTAAAAGTGAGGGATTTTGGCATTTGCAAGCCCAACCAGGTATGCAGCAACGATTGGCAGCAACAAA
AGATATCAAAACAATCAATCAATTAAATCAACTTGTGCTTGGGGCAACGCTTGATCAAGCATTATTTGAGTTGTTACAAC
AGCCATTTGCCCGCACACAACTTCGCCAAAGCTTGATTCAACAGTATTTTACGCCGGAATTATGGACTGCCCTCGGCATG
ATTGCCCAAATCAATACTGAAATTTTCGACTATAGCAAACTGTTAATTGAGCAAAGCCAGCGCATGTTTCGCGAAATTCC
AGCAACCGACGCGCCATACCAAGTTGAAGTACGTTCCAGCGCATTTCGCCAAATTGTCGTGCCTAGTTATGATTATTGCT
GTGCCATTTGTGGCATAAGAGTTATTACCCCCGAAGGGCGGAGTGCAGCCGAGGCGGCTCATATCATTCCGTGGAGTCGG
AGTTATAACGATGATCCGCGCAATGGGGTTGCATTGTGTGGATTGCATCATTGGGTATTCGATCAAGGTTTATTAACGAT
TACACCAAGCTATAAAATACAAATTTCACCGCTTGTCGATGATCAACCACCTGCTAACCAAACGCTGCTCGCCTTCACCC
GCCAATCAATCCAATTGCCCAACCAAGCGCACTTGTATCCTAATCCGATTGCGCTTAACTGGCATAATCAATTTGTCTAT
CGTAACGATTAA

Upstream 100 bases:

>100_bases
GATTACCGCCTGCATCGCCATCAATAAAAGCATTGACAATTTGCACTTCAATCTGCATAGTAATTCCTTAAATAGAGATT
TTAGAGCTTTGGGAGTATGT

Downstream 100 bases:

>100_bases
ATCCACATTTGTGCCCTAGGGTGTTGCTAAAGTAACTCCAACAATCAGTTGAAGTATTGAAGGAGTTCATCGATGCAACG
TTTTCTTGGTTTTATGCTGA

Product: HNH nuclease

Products: NA

Alternate protein names: Restriction Endonuclease-Like Protein; HNH Nuclease; HNH Endonuclease Family Protein; HNH Endonuclease; Conserved Protein

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MLAQYQRAFEKLKLSPSQAWPESTHFRAPYKPLMLLAVSDLISVGTLTHNFIEYSEFLLETFDRYWRIIFDSTKFANPIQ
PFFYLKSEGFWHLQAQPGMQQRLAATKDIKTINQLNQLVLGATLDQALFELLQQPFARTQLRQSLIQQYFTPELWTALGM
IAQINTEIFDYSKLLIEQSQRMFREIPATDAPYQVEVRSSAFRQIVVPSYDYCCAICGIRVITPEGRSAAEAAHIIPWSR
SYNDDPRNGVALCGLHHWVFDQGLLTITPSYKIQISPLVDDQPPANQTLLAFTRQSIQLPNQAHLYPNPIALNWHNQFVY
RND

Sequences:

>Translated_323_residues
MLAQYQRAFEKLKLSPSQAWPESTHFRAPYKPLMLLAVSDLISVGTLTHNFIEYSEFLLETFDRYWRIIFDSTKFANPIQ
PFFYLKSEGFWHLQAQPGMQQRLAATKDIKTINQLNQLVLGATLDQALFELLQQPFARTQLRQSLIQQYFTPELWTALGM
IAQINTEIFDYSKLLIEQSQRMFREIPATDAPYQVEVRSSAFRQIVVPSYDYCCAICGIRVITPEGRSAAEAAHIIPWSR
SYNDDPRNGVALCGLHHWVFDQGLLTITPSYKIQISPLVDDQPPANQTLLAFTRQSIQLPNQAHLYPNPIALNWHNQFVY
RND
>Mature_323_residues
MLAQYQRAFEKLKLSPSQAWPESTHFRAPYKPLMLLAVSDLISVGTLTHNFIEYSEFLLETFDRYWRIIFDSTKFANPIQ
PFFYLKSEGFWHLQAQPGMQQRLAATKDIKTINQLNQLVLGATLDQALFELLQQPFARTQLRQSLIQQYFTPELWTALGM
IAQINTEIFDYSKLLIEQSQRMFREIPATDAPYQVEVRSSAFRQIVVPSYDYCCAICGIRVITPEGRSAAEAAHIIPWSR
SYNDDPRNGVALCGLHHWVFDQGLLTITPSYKIQISPLVDDQPPANQTLLAFTRQSIQLPNQAHLYPNPIALNWHNQFVY
RND

Specific function: Unknown

COG id: COG3440

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37290; Mature: 37290

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQYQRAFEKLKLSPSQAWPESTHFRAPYKPLMLLAVSDLISVGTLTHNFIEYSEFLLE
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFDRYWRIIFDSTKFANPIQPFFYLKSEGFWHLQAQPGMQQRLAATKDIKTINQLNQLVL
HHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GATLDQALFELLQQPFARTQLRQSLIQQYFTPELWTALGMIAQINTEIFDYSKLLIEQSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMFREIPATDAPYQVEVRSSAFRQIVVPSYDYCCAICGIRVITPEGRSAAEAAHIIPWSR
HHHHHCCCCCCCEEEEECHHHHHEEECCCHHHHHHHHCCEEECCCCCCHHHHHHCCCCCC
SYNDDPRNGVALCGLHHWVFDQGLLTITPSYKIQISPLVDDQPPANQTLLAFTRQSIQLP
CCCCCCCCCEEEEHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
NQAHLYPNPIALNWHNQFVYRND
CCCCCCCCCEEEEECCEEEEECC
>Mature Secondary Structure
MLAQYQRAFEKLKLSPSQAWPESTHFRAPYKPLMLLAVSDLISVGTLTHNFIEYSEFLLE
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFDRYWRIIFDSTKFANPIQPFFYLKSEGFWHLQAQPGMQQRLAATKDIKTINQLNQLVL
HHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GATLDQALFELLQQPFARTQLRQSLIQQYFTPELWTALGMIAQINTEIFDYSKLLIEQSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMFREIPATDAPYQVEVRSSAFRQIVVPSYDYCCAICGIRVITPEGRSAAEAAHIIPWSR
HHHHHCCCCCCCEEEEECHHHHHEEECCCHHHHHHHHCCEEECCCCCCHHHHHHCCCCCC
SYNDDPRNGVALCGLHHWVFDQGLLTITPSYKIQISPLVDDQPPANQTLLAFTRQSIQLP
CCCCCCCCCEEEEHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
NQAHLYPNPIALNWHNQFVYRND
CCCCCCCCCEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA