| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897033
Identifier: 159897033
GI number: 159897033
Start: 582810
End: 583178
Strand: Reverse
Name: 159897033
Synonym: Haur_0501
Alternate gene names: NA
Gene position: 583178-582810 (Counterclockwise)
Preceding gene: 159897036
Following gene: 159897032
Centisome position: 9.19
GC content: 43.63
Gene sequence:
>369_bases ATGGAAATGTGGCATTTTACCGCAAGGGTTATAGCAATTGAGCAGCTCGCCGATGAGAATTTATTGATTTTGGGATTGGC CGATAAGACTGATCAGCCAGCTGAATATCTAACGATCCAGCGTAGTTTTGATCAAGATGACTTCGAAGCCGAAGCTAGTG ATTTGGATGGGTATTGTGTGTGCTTGCCCAACGGCGCAACTGATTATCGCTGTATCGAACGCTGGGAACTTGAATTAGGC CATCTGCACATTCATTTTAATCAACCAGCGCAAGCGGTTTTCCAACTTGCAGGCGTTGATCTGAGCTTAATCATTGATGA TCAACAACATCAGCAACTCCAGCAAACATTAAACCAATTGTTGACTTGA
Upstream 100 bases:
>100_bases AGCCTTCAGCCTGTAGCCATATTTCCTCCGTGTTAACTCATATTGTTGCCTTTTGATTTCATCCCTTATAGTTACCCTAA CAACATAGTGGAGTTTTGGC
Downstream 100 bases:
>100_bases AAGAGTATTGATAGTTTCATCTACGAAGGGTAAGGCTTATTGGCTATTTGTAATGGTTTATAGCATTAATAACCGCCAGT GTTCCCTCACCCCCTCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MEMWHFTARVIAIEQLADENLLILGLADKTDQPAEYLTIQRSFDQDDFEAEASDLDGYCVCLPNGATDYRCIERWELELG HLHIHFNQPAQAVFQLAGVDLSLIIDDQQHQQLQQTLNQLLT
Sequences:
>Translated_122_residues MEMWHFTARVIAIEQLADENLLILGLADKTDQPAEYLTIQRSFDQDDFEAEASDLDGYCVCLPNGATDYRCIERWELELG HLHIHFNQPAQAVFQLAGVDLSLIIDDQQHQQLQQTLNQLLT >Mature_122_residues MEMWHFTARVIAIEQLADENLLILGLADKTDQPAEYLTIQRSFDQDDFEAEASDLDGYCVCLPNGATDYRCIERWELELG HLHIHFNQPAQAVFQLAGVDLSLIIDDQQHQQLQQTLNQLLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13985; Mature: 13985
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMWHFTARVIAIEQLADENLLILGLADKTDQPAEYLTIQRSFDQDDFEAEASDLDGYCV CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEEECCCCCCCCCCCCCCCCCEEE CLPNGATDYRCIERWELELGHLHIHFNQPAQAVFQLAGVDLSLIIDDQQHQQLQQTLNQL ECCCCCCCHHHHHHHEEEEEEEEEEECCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH LT CC >Mature Secondary Structure MEMWHFTARVIAIEQLADENLLILGLADKTDQPAEYLTIQRSFDQDDFEAEASDLDGYCV CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEEECCCCCCCCCCCCCCCCCEEE CLPNGATDYRCIERWELELGHLHIHFNQPAQAVFQLAGVDLSLIIDDQQHQQLQQTLNQL ECCCCCCCHHHHHHHEEEEEEEEEEECCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH LT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA