| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yceI [C]
Identifier: 159897036
GI number: 159897036
Start: 587689
End: 588492
Strand: Reverse
Name: yceI [C]
Synonym: Haur_0504
Alternate gene names: 159897036
Gene position: 588492-587689 (Counterclockwise)
Preceding gene: 159897039
Following gene: 159897033
Centisome position: 9.27
GC content: 49.0
Gene sequence:
>804_bases ATGAAGAAATTTGGTTTAATTATTGGTGGTGTTATCGCCATCGCTGTGATTGGCGCAATTGCCTATACCTTATGGCTCAC ATCAGATGTAGAAGTATCTACGAGCACGCCAGTGGCTGCAACCTTGGTCTTGCCAACGACGGCTCCGACGACTGCGGCTG CTCCAGCCACTGCCACCACCGCCAGTGATAACACTGCTGCTGCTACTGCCACGACTGGCACCGAACCAACTACAGATGCT TCACAACCAGCCGCTGCTGGTGCAAAAATCTATCGCATTGATGCCAGTCAATCAAGTGCTAGCTACCAAGTGCGCGAAAC CTTCTTGCAAGATAACAAAATCGTTGATGCAGTTGGCGTGACCAAAGCGATCGCTGGCGAGCTGTTGATCGATACTGCAA CTCCAGCCAACTCACAAGTTGGCGAAATTGTGGTTGATATCAGCCAATTGCAATCAGATAGCGAACGCCGTGATAATGCG ATTCGCCGCGAATGGCTCGAATCGTCGAAATATCCTAATGCTGTTTTCAAGAACGGGGTCATTAGCAATTTGCCCAGCGA TCTCAAAGAAGGCGTTGAATTCAGTTTCCAAATCACTGGCGATATGACGATTCACGATACAACCAACCCATTGACCTTCG ATGTCACTGCAACCTTGAATGGCGATACCTTGACCGGCAAGGCTACCACCAAATTCAATATGAGCAGCTTTAACGTTGAT GCTCCTGACATCGGTGGCATGCTCAAGGCCGAAGATGAAGTTTTGTTGACCTTGGATTTGGTTGCTACCGCAGTCGCCCA ATAA
Upstream 100 bases:
>100_bases ATCCCAGCCAAAACGTTGTTGTAAGGCTTGGGCTGCATCGCCAGTTTCCCACAAAAGATCGAGTTGTTGCATCATTTTAA ACTCATGAAAGGATTGTTCA
Downstream 100 bases:
>100_bases CAACAATTGGCGAGGAAATGCAAAAACGCCCTGATCATTGCGATCAGGGCGTTTTTTTGAGGTTTAGACTAATTCGGCTT CAGGCTCGACACTGGGATTT
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKKFGLIIGGVIAIAVIGAIAYTLWLTSDVEVSTSTPVAATLVLPTTAPTTAAAPATATTASDNTAAATATTGTEPTTDA SQPAAAGAKIYRIDASQSSASYQVRETFLQDNKIVDAVGVTKAIAGELLIDTATPANSQVGEIVVDISQLQSDSERRDNA IRREWLESSKYPNAVFKNGVISNLPSDLKEGVEFSFQITGDMTIHDTTNPLTFDVTATLNGDTLTGKATTKFNMSSFNVD APDIGGMLKAEDEVLLTLDLVATAVAQ
Sequences:
>Translated_267_residues MKKFGLIIGGVIAIAVIGAIAYTLWLTSDVEVSTSTPVAATLVLPTTAPTTAAAPATATTASDNTAAATATTGTEPTTDA SQPAAAGAKIYRIDASQSSASYQVRETFLQDNKIVDAVGVTKAIAGELLIDTATPANSQVGEIVVDISQLQSDSERRDNA IRREWLESSKYPNAVFKNGVISNLPSDLKEGVEFSFQITGDMTIHDTTNPLTFDVTATLNGDTLTGKATTKFNMSSFNVD APDIGGMLKAEDEVLLTLDLVATAVAQ >Mature_267_residues MKKFGLIIGGVIAIAVIGAIAYTLWLTSDVEVSTSTPVAATLVLPTTAPTTAAAPATATTASDNTAAATATTGTEPTTDA SQPAAAGAKIYRIDASQSSASYQVRETFLQDNKIVDAVGVTKAIAGELLIDTATPANSQVGEIVVDISQLQSDSERRDNA IRREWLESSKYPNAVFKNGVISNLPSDLKEGVEFSFQITGDMTIHDTTNPLTFDVTATLNGDTLTGKATTKFNMSSFNVD APDIGGMLKAEDEVLLTLDLVATAVAQ
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27819; Mature: 27819
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFGLIIGGVIAIAVIGAIAYTLWLTSDVEVSTSTPVAATLVLPTTAPTTAAAPATATT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCEEC ASDNTAAATATTGTEPTTDASQPAAAGAKIYRIDASQSSASYQVRETFLQDNKIVDAVGV CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEHHHH TKAIAGELLIDTATPANSQVGEIVVDISQLQSDSERRDNAIRREWLESSKYPNAVFKNGV HHHHHCCEEEECCCCCCCCHHHHEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHCCC ISNLPSDLKEGVEFSFQITGDMTIHDTTNPLTFDVTATLNGDTLTGKATTKFNMSSFNVD HHCCCHHHHHCCEEEEEEECCEEEECCCCCEEEEEEEEECCCEEECCEEEEEECCCCCCC APDIGGMLKAEDEVLLTLDLVATAVAQ CCCCCCEEECCCCEEEEHHHHHHHHCC >Mature Secondary Structure MKKFGLIIGGVIAIAVIGAIAYTLWLTSDVEVSTSTPVAATLVLPTTAPTTAAAPATATT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCEEC ASDNTAAATATTGTEPTTDASQPAAAGAKIYRIDASQSSASYQVRETFLQDNKIVDAVGV CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEHHHH TKAIAGELLIDTATPANSQVGEIVVDISQLQSDSERRDNAIRREWLESSKYPNAVFKNGV HHHHHCCEEEECCCCCCCCHHHHEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHCCC ISNLPSDLKEGVEFSFQITGDMTIHDTTNPLTFDVTATLNGDTLTGKATTKFNMSSFNVD HHCCCHHHHHCCEEEEEEECCEEEECCCCCEEEEEEEEECCCEEECCEEEEEECCCCCCC APDIGGMLKAEDEVLLTLDLVATAVAQ CCCCCCEEECCCCEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA