| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897032
Identifier: 159897032
GI number: 159897032
Start: 581350
End: 582423
Strand: Reverse
Name: 159897032
Synonym: Haur_0500
Alternate gene names: NA
Gene position: 582423-581350 (Counterclockwise)
Preceding gene: 159897033
Following gene: 159897031
Centisome position: 9.18
GC content: 52.51
Gene sequence:
>1074_bases ATGATACCAGTGTGCAATGTGGCACAGCGGAATCGGGCATACAGCTCATGCAATGGAGAATCTGGCTTGATTCGACCTGT TCGCTTGGTAGATAGTCTTGAGTTGCGGCGCACGCCGTACACCTATATGTTGTTGGGCAGCGAGCATGTGCTGGCGGGCA ACCATCGACCGTTGGGCTTTGCGTTACGCTGTTTAATGCCTTTTGCCCAGGATCGCCATACCTTGGTTTATCATGAGCGT GGCCTGCGTGGCTATGTCCAAGGCTGGTATCGTTTAAATAGTGCTGATGCCGATTTGGTGTATCTGGCATCGCAACCGTT TCGGCGTGGCATGCGCCAACCAACCGACCCCGATGTTTGGTATCGTTTGTTAGAAGCATTTGTGGTGCGCATGGGTTCGC GCAATATCGAGCGTATCTTCGCACCGTTGGCCTCGAACTCACCACATTTAGAAGTTTTTCGCCAACTTGGCTTTCAAAGT TATGCGACGCGGCAGGTTTGGCGGACTTTAACTCCCGATGTTGCCGAAGGTAGCTCAATTATTGTGTTACGCCCACAACA GCGTCGCGACCCGCATGCAATCCAACGATTGTATGAGGCGATCACCCCAGCAACTGTTGTACGATATGAAGGACGAACAT CACGATCGTGGCAATTGCCGGTCGTTGCCCGTCATGGGGTTCGTCAGCGCTCATGGGTGCTTGGGCGCGATGGCCGAGAT GATATTTTACGGGCGGCCTTGCATGTGTGGCTTGGCCCACACGCCGCAGTTATGAGCCTTCTGATCGATCCTGCTGAGCA ACGCTTAGCCTCGTCGGTTATTCGATTTGGAATGAGCCAATTGGCCAATGCCCATCAAGGTGTCGTCTATCTCCTTTTGC CAGAATATCATGGCGAGTTGCATCACAACTTGGAGGAAATCGGCTTTGAACATATTGGAGATCAACGCCTGACGGTCAAG GAACTCACAGTGCCACTACGCAATCCATTGTTGCGGCCTGTGATCGAAGGAACGCGAGAAAGCGTCGTCAATCCGTCGCT GTCATCGTCGGTTCAATCCGAACCGTGTATCTAA
Upstream 100 bases:
>100_bases TCATCAAGTCGTTGGCTATTGCCTATTGCCTTTTGATTTCATCCTTCATCCTTCACACTTATTAATACTCTGCTAGTTTT TTTCTGGCCTAAATTGTGCG
Downstream 100 bases:
>100_bases CACACCCCGGCGTGTGTTTGAGAGGGATGCAACTATGTTAGATCGTCGCGAAATTACCCATAATATCGATCTGTTGCTGT CAACCTTGCCGCCACGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MIPVCNVAQRNRAYSSCNGESGLIRPVRLVDSLELRRTPYTYMLLGSEHVLAGNHRPLGFALRCLMPFAQDRHTLVYHER GLRGYVQGWYRLNSADADLVYLASQPFRRGMRQPTDPDVWYRLLEAFVVRMGSRNIERIFAPLASNSPHLEVFRQLGFQS YATRQVWRTLTPDVAEGSSIIVLRPQQRRDPHAIQRLYEAITPATVVRYEGRTSRSWQLPVVARHGVRQRSWVLGRDGRD DILRAALHVWLGPHAAVMSLLIDPAEQRLASSVIRFGMSQLANAHQGVVYLLLPEYHGELHHNLEEIGFEHIGDQRLTVK ELTVPLRNPLLRPVIEGTRESVVNPSLSSSVQSEPCI
Sequences:
>Translated_357_residues MIPVCNVAQRNRAYSSCNGESGLIRPVRLVDSLELRRTPYTYMLLGSEHVLAGNHRPLGFALRCLMPFAQDRHTLVYHER GLRGYVQGWYRLNSADADLVYLASQPFRRGMRQPTDPDVWYRLLEAFVVRMGSRNIERIFAPLASNSPHLEVFRQLGFQS YATRQVWRTLTPDVAEGSSIIVLRPQQRRDPHAIQRLYEAITPATVVRYEGRTSRSWQLPVVARHGVRQRSWVLGRDGRD DILRAALHVWLGPHAAVMSLLIDPAEQRLASSVIRFGMSQLANAHQGVVYLLLPEYHGELHHNLEEIGFEHIGDQRLTVK ELTVPLRNPLLRPVIEGTRESVVNPSLSSSVQSEPCI >Mature_357_residues MIPVCNVAQRNRAYSSCNGESGLIRPVRLVDSLELRRTPYTYMLLGSEHVLAGNHRPLGFALRCLMPFAQDRHTLVYHER GLRGYVQGWYRLNSADADLVYLASQPFRRGMRQPTDPDVWYRLLEAFVVRMGSRNIERIFAPLASNSPHLEVFRQLGFQS YATRQVWRTLTPDVAEGSSIIVLRPQQRRDPHAIQRLYEAITPATVVRYEGRTSRSWQLPVVARHGVRQRSWVLGRDGRD DILRAALHVWLGPHAAVMSLLIDPAEQRLASSVIRFGMSQLANAHQGVVYLLLPEYHGELHHNLEEIGFEHIGDQRLTVK ELTVPLRNPLLRPVIEGTRESVVNPSLSSSVQSEPCI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40641; Mature: 40641
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVCNVAQRNRAYSSCNGESGLIRPVRLVDSLELRRTPYTYMLLGSEHVLAGNHRPLGF CCCCCCCHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCHHH ALRCLMPFAQDRHTLVYHERGLRGYVQGWYRLNSADADLVYLASQPFRRGMRQPTDPDVW HHHHHHHHHCCCCEEEEECCCCHHHHHHHHEECCCCCCEEEECCCHHHHHCCCCCCHHHH YRLLEAFVVRMGSRNIERIFAPLASNSPHLEVFRQLGFQSYATRQVWRTLTPDVAEGSSI HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEE IVLRPQQRRDPHAIQRLYEAITPATVVRYEGRTSRSWQLPVVARHGVRQRSWVLGRDGRD EEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCCCEECCCCCHH DILRAALHVWLGPHAAVMSLLIDPAEQRLASSVIRFGMSQLANAHQGVVYLLLPEYHGEL HHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHCCEEEEEECCCCCHH HHNLEEIGFEHIGDQRLTVKELTVPLRNPLLRPVIEGTRESVVNPSLSSSVQSEPCI HHCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC >Mature Secondary Structure MIPVCNVAQRNRAYSSCNGESGLIRPVRLVDSLELRRTPYTYMLLGSEHVLAGNHRPLGF CCCCCCCHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCHHH ALRCLMPFAQDRHTLVYHERGLRGYVQGWYRLNSADADLVYLASQPFRRGMRQPTDPDVW HHHHHHHHHCCCCEEEEECCCCHHHHHHHHEECCCCCCEEEECCCHHHHHCCCCCCHHHH YRLLEAFVVRMGSRNIERIFAPLASNSPHLEVFRQLGFQSYATRQVWRTLTPDVAEGSSI HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEE IVLRPQQRRDPHAIQRLYEAITPATVVRYEGRTSRSWQLPVVARHGVRQRSWVLGRDGRD EEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCCCEECCCCCHH DILRAALHVWLGPHAAVMSLLIDPAEQRLASSVIRFGMSQLANAHQGVVYLLLPEYHGEL HHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHCCEEEEEECCCCCHH HHNLEEIGFEHIGDQRLTVKELTVPLRNPLLRPVIEGTRESVVNPSLSSSVQSEPCI HHCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA