| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ywbL [H]
Identifier: 159897000
GI number: 159897000
Start: 545911
End: 548373
Strand: Reverse
Name: ywbL [H]
Synonym: Haur_0468
Alternate gene names: 159897000
Gene position: 548373-545911 (Counterclockwise)
Preceding gene: 159897001
Following gene: 159896999
Centisome position: 8.64
GC content: 52.62
Gene sequence:
>2463_bases GTGTGCGTCCCTCCATCAAGCAACTTAAGGAGCAAAGGGCGTGAACTGTTGGCATGCAGGTCACGTCCTTTGTCGGTTTA CTATGCTGTTGCCCAACGTGAGCAGCAGCAAATCACATTTTTAGGAGCTTGTATGTGGTTGCGTCGTTTTTTGCTGGCGT TGGTCGTCTCTTTATTGCCATGGTCGGCCATGGCAGCCGAACCATCACCAGCCCAAGCCAGCGAATCGGTGCGTTCGCTG CTGGTGCAAGCCCAATTAATTCTCACCAATGATCCTGCTCAAGCCCAAAGCCTGCTTAACCAAGCCCAAGCCTTGTACGA TCAGGCCTTGGCTAAAGATTTGACCAATTTAGCGCCCCAACAAGCAGCGGAAATCGCCACACGTTGGACCGATTTAGCCC AAGCCTTGGAAAAACAAGATGTGGCCGGATTTGCCCAACAACGGGCTTTGCTCTGGACGCATTTGCTCAAGGCCAGTTAT GGAATTGTTGGTCAAGCGATCGATACTGGCAAACCTGAGCAAGCACTGCAATGGCTGCCCGTTCGCGAATTTCGCAATGC CACCCGTTTTTCGCGCCCCAACGGCGATGCTGCTCGGGCAATCGAGCAATGGAAACAAGCAGCCTACAGCGCCGCCGATG CGCGAACTGCCCTTGATGCCGATTTGTTGGATACCTATCAGGCCAAGCTTAACGAGAGTTTGCGCACTCTACGCAGCGCT GCCCAAAAAGGCAATTTAATTCAACAAGCTGAGGCTGGTGCGGCGATTCAAGGCTATTTTGCTATTTTAGAGCCAGCCTA TCGTAGCCAGCACCCTGAGAAGGTCGATGCAGCTTTGGTTAATGCTGAAAACTTACGTCAAGCAGCACTCAGCAACAACC AGCTTGAAGCGGCAATCGGCAGCTTTGAAGGCTCGCTGAGCGGTTTTCGGGCGGCTCCCCTTAGCCCATCGGAGCAAGTA CGCCGCGCTGGCCAGATGCGCCGTTTCTTAAGCTTAGTGCCAGTAGAATATGAACGAGGCGTGCGCAACGGCCAAGTTAC GCTGGATCTCGAAATTCAAGAAGCAACGACCTTTCGCAATGGCGCAGCCGCTGCCTTTAGCGACCTCGAAAGCCTTTTGA TCGCAATTGATTCGACCAAAACTCAACAAGTCGCCAGCGATCTACGCGAGCTGGAAACGATGCTGACCGCTGCAGCTCAA CGGACGAGTGTGGCCGAGCCAGATGCGGTTCAAGCCAAAGTCGATCATATCACCACAACCTTGGCCGAAATTATGCCCGC CGAGTGGCAGAAATCCAGCCTCGAAGGCGATTTCGATGTAATCGCTTCAATGCTTGATCAGATGGAAAATGCGGTGGCTG GCGACCAATATGATCTCGCCGAATCGGCCCGTTTGGAAGCCTACGCTGTGTTGGAATCTGGCCCAGAAGCGCGTTTGATT GTGTTTGCTCCTGAATATAAAGCGCCAATTGAAAACCTGTTTTGGTATGGCAAAGATGAATTTACTGGCCTAGCTGAGTT GATTCGCCAAAAAGCTTCGCTCAGCGATATTCGCGCTAGCCGCCAAGCCTTGGATAAACAATTGGATTTAGCCCAAGATG CGCTTGGCGGCTCTAGCACGCCCGAAGCGGTAGCAACTAGCGCCGCCGTGATTGTGTTTCGCGAAGGCTTAGAGGCGGTG TTAATTTTGGCTTCGTTGTTGGCAAGCCTCAAAATTGGCGAACAACGTGGCTATCGCAAACCAATTTGGATCGGTGCAAC CCTCGCCATGTTAGCAACGGTATTGACGTGGGTGCTGGCGCGGGGCTTGATCACCGAACTGATTCGGCGTGGCGATCAAG AAAAGATCGAAGCGATTGTTTCATTAATTGCCATCGCCGTGCTGTTGTTAATCACCAACTGGTTTTTCCACAAAGTCTAC TGGACTGGCTGGATGGCCAATTTTCATGCCCAAAAGCGCCGAATTATTGGTGGCAAGGCTGGGCTTTGGCTCGGTTTGAT CACCTTGGGCTTTACCAGCATCTACCGTGAAGGCGTTGAAACTGTGCTCTTTTTGCAAGCGCTCGTGCTTGAAGCCAGCA CCCAAGTGGTGTTAGCCGGCGTGGCTATGGGGCTTGGTGGCACAGCCTTGGTTGGTGTGCTGGTCTTTGGACTGCAAGCC AAATTGCCCCATAAGAAGATGCTGATCGTGACTGGGGTGATGATTGGCGCGGTCTTGTTGATTATGGTTGGCAACACCAT GCACATTATGCAGTTGGTTGGCTGGATGCCGCTGCACCCAATTCGTAGCCTCGAAATCCCCTACTGGGCCAATATGTGGC TGGGTTTCTATGCGACGTGGGAAGGCATTGCGGCCCAAGTTGCAGCTGGCGCATTTGTGATTGGCTCTTATGTGATTGCC GAGCACTTGCAGCATCGCAAAACTGAGGTTGCCGTCAAACGCCAAAGTGCAACCGCCAAATAA
Upstream 100 bases:
>100_bases TTAACAAATCCTCGTACAATAGATATGCTGGCTACACCACAGGTATATCTATGCTATCAATGAGCAAGAAGTTGCGACAG AGCAAGGTTGATGGAGCTGG
Downstream 100 bases:
>100_bases ATAATGAAATGCCCTCACCCCAACCCCTCTCGCAAGAGTAGGTTTTAACGCCCCCTCACCCCAACCCCTCTCCCGCTGCG GCAGGCGAGGGGCTTTGATT
Product: iron permease FTR1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MCVPPSSNLRSKGRELLACRSRPLSVYYAVAQREQQQITFLGACMWLRRFLLALVVSLLPWSAMAAEPSPAQASESVRSL LVQAQLILTNDPAQAQSLLNQAQALYDQALAKDLTNLAPQQAAEIATRWTDLAQALEKQDVAGFAQQRALLWTHLLKASY GIVGQAIDTGKPEQALQWLPVREFRNATRFSRPNGDAARAIEQWKQAAYSAADARTALDADLLDTYQAKLNESLRTLRSA AQKGNLIQQAEAGAAIQGYFAILEPAYRSQHPEKVDAALVNAENLRQAALSNNQLEAAIGSFEGSLSGFRAAPLSPSEQV RRAGQMRRFLSLVPVEYERGVRNGQVTLDLEIQEATTFRNGAAAAFSDLESLLIAIDSTKTQQVASDLRELETMLTAAAQ RTSVAEPDAVQAKVDHITTTLAEIMPAEWQKSSLEGDFDVIASMLDQMENAVAGDQYDLAESARLEAYAVLESGPEARLI VFAPEYKAPIENLFWYGKDEFTGLAELIRQKASLSDIRASRQALDKQLDLAQDALGGSSTPEAVATSAAVIVFREGLEAV LILASLLASLKIGEQRGYRKPIWIGATLAMLATVLTWVLARGLITELIRRGDQEKIEAIVSLIAIAVLLLITNWFFHKVY WTGWMANFHAQKRRIIGGKAGLWLGLITLGFTSIYREGVETVLFLQALVLEASTQVVLAGVAMGLGGTALVGVLVFGLQA KLPHKKMLIVTGVMIGAVLLIMVGNTMHIMQLVGWMPLHPIRSLEIPYWANMWLGFYATWEGIAAQVAAGAFVIGSYVIA EHLQHRKTEVAVKRQSATAK
Sequences:
>Translated_820_residues MCVPPSSNLRSKGRELLACRSRPLSVYYAVAQREQQQITFLGACMWLRRFLLALVVSLLPWSAMAAEPSPAQASESVRSL LVQAQLILTNDPAQAQSLLNQAQALYDQALAKDLTNLAPQQAAEIATRWTDLAQALEKQDVAGFAQQRALLWTHLLKASY GIVGQAIDTGKPEQALQWLPVREFRNATRFSRPNGDAARAIEQWKQAAYSAADARTALDADLLDTYQAKLNESLRTLRSA AQKGNLIQQAEAGAAIQGYFAILEPAYRSQHPEKVDAALVNAENLRQAALSNNQLEAAIGSFEGSLSGFRAAPLSPSEQV RRAGQMRRFLSLVPVEYERGVRNGQVTLDLEIQEATTFRNGAAAAFSDLESLLIAIDSTKTQQVASDLRELETMLTAAAQ RTSVAEPDAVQAKVDHITTTLAEIMPAEWQKSSLEGDFDVIASMLDQMENAVAGDQYDLAESARLEAYAVLESGPEARLI VFAPEYKAPIENLFWYGKDEFTGLAELIRQKASLSDIRASRQALDKQLDLAQDALGGSSTPEAVATSAAVIVFREGLEAV LILASLLASLKIGEQRGYRKPIWIGATLAMLATVLTWVLARGLITELIRRGDQEKIEAIVSLIAIAVLLLITNWFFHKVY WTGWMANFHAQKRRIIGGKAGLWLGLITLGFTSIYREGVETVLFLQALVLEASTQVVLAGVAMGLGGTALVGVLVFGLQA KLPHKKMLIVTGVMIGAVLLIMVGNTMHIMQLVGWMPLHPIRSLEIPYWANMWLGFYATWEGIAAQVAAGAFVIGSYVIA EHLQHRKTEVAVKRQSATAK >Mature_820_residues MCVPPSSNLRSKGRELLACRSRPLSVYYAVAQREQQQITFLGACMWLRRFLLALVVSLLPWSAMAAEPSPAQASESVRSL LVQAQLILTNDPAQAQSLLNQAQALYDQALAKDLTNLAPQQAAEIATRWTDLAQALEKQDVAGFAQQRALLWTHLLKASY GIVGQAIDTGKPEQALQWLPVREFRNATRFSRPNGDAARAIEQWKQAAYSAADARTALDADLLDTYQAKLNESLRTLRSA AQKGNLIQQAEAGAAIQGYFAILEPAYRSQHPEKVDAALVNAENLRQAALSNNQLEAAIGSFEGSLSGFRAAPLSPSEQV RRAGQMRRFLSLVPVEYERGVRNGQVTLDLEIQEATTFRNGAAAAFSDLESLLIAIDSTKTQQVASDLRELETMLTAAAQ RTSVAEPDAVQAKVDHITTTLAEIMPAEWQKSSLEGDFDVIASMLDQMENAVAGDQYDLAESARLEAYAVLESGPEARLI VFAPEYKAPIENLFWYGKDEFTGLAELIRQKASLSDIRASRQALDKQLDLAQDALGGSSTPEAVATSAAVIVFREGLEAV LILASLLASLKIGEQRGYRKPIWIGATLAMLATVLTWVLARGLITELIRRGDQEKIEAIVSLIAIAVLLLITNWFFHKVY WTGWMANFHAQKRRIIGGKAGLWLGLITLGFTSIYREGVETVLFLQALVLEASTQVVLAGVAMGLGGTALVGVLVFGLQA KLPHKKMLIVTGVMIGAVLLIMVGNTMHIMQLVGWMPLHPIRSLEIPYWANMWLGFYATWEGIAAQVAAGAFVIGSYVIA EHLQHRKTEVAVKRQSATAK
Specific function: Unknown
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 89525; Mature: 89525
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVPPSSNLRSKGRELLACRSRPLSVYYAVAQREQQQITFLGACMWLRRFLLALVVSLLP CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WSAMAAEPSPAQASESVRSLLVQAQLILTNDPAQAQSLLNQAQALYDQALAKDLTNLAPQ CHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH QAAEIATRWTDLAQALEKQDVAGFAQQRALLWTHLLKASYGIVGQAIDTGKPEQALQWLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHCC VREFRNATRFSRPNGDAARAIEQWKQAAYSAADARTALDADLLDTYQAKLNESLRTLRSA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQKGNLIQQAEAGAAIQGYFAILEPAYRSQHPEKVDAALVNAENLRQAALSNNQLEAAIG HHHCCHHHHHHCCCHHHHHHHHHCHHHHCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHH SFEGSLSGFRAAPLSPSEQVRRAGQMRRFLSLVPVEYERGVRNGQVTLDLEIQEATTFRN HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEHHHHHHCC GAAAAFSDLESLLIAIDSTKTQQVASDLRELETMLTAAAQRTSVAEPDAVQAKVDHITTT CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LAEIMPAEWQKSSLEGDFDVIASMLDQMENAVAGDQYDLAESARLEAYAVLESGPEARLI HHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCEEE VFAPEYKAPIENLFWYGKDEFTGLAELIRQKASLSDIRASRQALDKQLDLAQDALGGSST EECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PEAVATSAAVIVFREGLEAVLILASLLASLKIGEQRGYRKPIWIGATLAMLATVLTWVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHH RGLITELIRRGDQEKIEAIVSLIAIAVLLLITNWFFHKVYWTGWMANFHAQKRRIIGGKA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GLWLGLITLGFTSIYREGVETVLFLQALVLEASTQVVLAGVAMGLGGTALVGVLVFGLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC KLPHKKMLIVTGVMIGAVLLIMVGNTMHIMQLVGWMPLHPIRSLEIPYWANMWLGFYATW CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH EGIAAQVAAGAFVIGSYVIAEHLQHRKTEVAVKRQSATAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MCVPPSSNLRSKGRELLACRSRPLSVYYAVAQREQQQITFLGACMWLRRFLLALVVSLLP CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WSAMAAEPSPAQASESVRSLLVQAQLILTNDPAQAQSLLNQAQALYDQALAKDLTNLAPQ CHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH QAAEIATRWTDLAQALEKQDVAGFAQQRALLWTHLLKASYGIVGQAIDTGKPEQALQWLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHCC VREFRNATRFSRPNGDAARAIEQWKQAAYSAADARTALDADLLDTYQAKLNESLRTLRSA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQKGNLIQQAEAGAAIQGYFAILEPAYRSQHPEKVDAALVNAENLRQAALSNNQLEAAIG HHHCCHHHHHHCCCHHHHHHHHHCHHHHCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHH SFEGSLSGFRAAPLSPSEQVRRAGQMRRFLSLVPVEYERGVRNGQVTLDLEIQEATTFRN HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEHHHHHHCC GAAAAFSDLESLLIAIDSTKTQQVASDLRELETMLTAAAQRTSVAEPDAVQAKVDHITTT CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LAEIMPAEWQKSSLEGDFDVIASMLDQMENAVAGDQYDLAESARLEAYAVLESGPEARLI HHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCEEE VFAPEYKAPIENLFWYGKDEFTGLAELIRQKASLSDIRASRQALDKQLDLAQDALGGSST EECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PEAVATSAAVIVFREGLEAVLILASLLASLKIGEQRGYRKPIWIGATLAMLATVLTWVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHH RGLITELIRRGDQEKIEAIVSLIAIAVLLLITNWFFHKVYWTGWMANFHAQKRRIIGGKA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GLWLGLITLGFTSIYREGVETVLFLQALVLEASTQVVLAGVAMGLGGTALVGVLVFGLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC KLPHKKMLIVTGVMIGAVLLIMVGNTMHIMQLVGWMPLHPIRSLEIPYWANMWLGFYATW CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH EGIAAQVAAGAFVIGSYVIAEHLQHRKTEVAVKRQSATAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]