| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897001
Identifier: 159897001
GI number: 159897001
Start: 548512
End: 549588
Strand: Reverse
Name: 159897001
Synonym: Haur_0469
Alternate gene names: NA
Gene position: 549588-548512 (Counterclockwise)
Preceding gene: 159897007
Following gene: 159897000
Centisome position: 8.66
GC content: 50.14
Gene sequence:
>1077_bases ATGTATCGTTGGCTTTGTGCATTAACCCTTGTGGCAGTTCTCGCTGGCTGTGGCGCTGAAACTGCTCCTACCACTCAACC GACCCAAGCACCTGCTGCTGGCGAACTTGGGGCAATCAAGACCTATCTTTTGGGCAAAACTGGCGATTTGATCAATAGCA GCACCGCTTTGGAGACCGCAAGTCAGCGTTATTATGATTTGGCGAAAGCTGCCAATTTTGATTATGCGACCCTCTGGAGT AGCAAACAAGCCGAGGTTGGCACTGCATTAAACGATGCCAAAGCCGCTTGGTTGAAATCCAGCCCTACCTACGAGCAAAT GGAAGGGATCGTTGCAGGCGTAAGCAGTTTGGCCGATTTCGATGTGACGCTTGATGCTGGTGCTTCGGCAGAAGAAGGCG GCGATAGCGTGGTCAATTATGATTTGACGTTAGCTGATGGCCGCACGATTGCCAAACCTGGTAATTTGTTTGGCGTAACC GAAAGCACGCTCTGGGGCACTTACGATGCCTTCCGCGTTACCGATGTTGAAGCTGATATCAATGGCAACGGCACGGTAGA ATTTGGCGAATCGTTGCCCGAAGCCAATGTGCTGTTGGCCGCTGCCCAAAAGCTCAAAGCCACTGCAACCGAGCTTGATA CCGCTGCCAAGGCTTGGGAACCAACCGACACCGATGCATTTAGCGCCTTGGTCGTGATGGTGCCAACCATGAACGAATAT TTCGATTCATGGAAGAACTCACGCTTTGTGGCTGGCGATAGCAGCACCCAACGCGATTTTGTGGCTATCTCACGATTGGC CGATATTGGCGATATTTTGGGCAGTTTGCAGGTGGTGTACGATAGCCTCAGCCCTAAAGTTGCCGCGCTCGATGCCGACC AAGATCGCCAAATCAAAACCAATTTGCAAGCATTACGCGATTTTGTGGCCGATGTCTATAAAAAAGAACAAGCTGGCCAA CACTTTACGGCTGAAGAATCCGATTTGCTTGGTGCTGAAGCCCAAAATCGTGCTGATGCAATTACAGGTCAAGTCAGCCA AATTGCTGCTCGTTTGAATATTAAAATCAGCGAATAA
Upstream 100 bases:
>100_bases AGTATTAGCGCGACGTATACTCTGCCAATCGCAATAAAAACTGTTTTTTCAGTATTAACCGATTTAACTACAAGCTTTGG CATTTGGAGGTTTCTGGCTC
Downstream 100 bases:
>100_bases GCTGCTTATTCTCAGTATAAAATAGGTTCGCGAACGGATTAACAAATCCTCGTACAATAGATATGCTGGCTACACCACAG GTATATCTATGCTATCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MYRWLCALTLVAVLAGCGAETAPTTQPTQAPAAGELGAIKTYLLGKTGDLINSSTALETASQRYYDLAKAANFDYATLWS SKQAEVGTALNDAKAAWLKSSPTYEQMEGIVAGVSSLADFDVTLDAGASAEEGGDSVVNYDLTLADGRTIAKPGNLFGVT ESTLWGTYDAFRVTDVEADINGNGTVEFGESLPEANVLLAAAQKLKATATELDTAAKAWEPTDTDAFSALVVMVPTMNEY FDSWKNSRFVAGDSSTQRDFVAISRLADIGDILGSLQVVYDSLSPKVAALDADQDRQIKTNLQALRDFVADVYKKEQAGQ HFTAEESDLLGAEAQNRADAITGQVSQIAARLNIKISE
Sequences:
>Translated_358_residues MYRWLCALTLVAVLAGCGAETAPTTQPTQAPAAGELGAIKTYLLGKTGDLINSSTALETASQRYYDLAKAANFDYATLWS SKQAEVGTALNDAKAAWLKSSPTYEQMEGIVAGVSSLADFDVTLDAGASAEEGGDSVVNYDLTLADGRTIAKPGNLFGVT ESTLWGTYDAFRVTDVEADINGNGTVEFGESLPEANVLLAAAQKLKATATELDTAAKAWEPTDTDAFSALVVMVPTMNEY FDSWKNSRFVAGDSSTQRDFVAISRLADIGDILGSLQVVYDSLSPKVAALDADQDRQIKTNLQALRDFVADVYKKEQAGQ HFTAEESDLLGAEAQNRADAITGQVSQIAARLNIKISE >Mature_358_residues MYRWLCALTLVAVLAGCGAETAPTTQPTQAPAAGELGAIKTYLLGKTGDLINSSTALETASQRYYDLAKAANFDYATLWS SKQAEVGTALNDAKAAWLKSSPTYEQMEGIVAGVSSLADFDVTLDAGASAEEGGDSVVNYDLTLADGRTIAKPGNLFGVT ESTLWGTYDAFRVTDVEADINGNGTVEFGESLPEANVLLAAAQKLKATATELDTAAKAWEPTDTDAFSALVVMVPTMNEY FDSWKNSRFVAGDSSTQRDFVAISRLADIGDILGSLQVVYDSLSPKVAALDADQDRQIKTNLQALRDFVADVYKKEQAGQ HFTAEESDLLGAEAQNRADAITGQVSQIAARLNIKISE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38070; Mature: 38070
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRWLCALTLVAVLAGCGAETAPTTQPTQAPAAGELGAIKTYLLGKTGDLINSSTALETA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHH SQRYYDLAKAANFDYATLWSSKQAEVGTALNDAKAAWLKSSPTYEQMEGIVAGVSSLADF HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC DVTLDAGASAEEGGDSVVNYDLTLADGRTIAKPGNLFGVTESTLWGTYDAFRVTDVEADI CEEECCCCCCCCCCCCEEEEEEEEECCCEECCCCCEEECCCCHHCCCCCCEEEEEEEECC NGNGTVEFGESLPEANVLLAAAQKLKATATELDTAAKAWEPTDTDAFSALVVMVPTMNEY CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCHHHH FDSWKNSRFVAGDSSTQRDFVAISRLADIGDILGSLQVVYDSLSPKVAALDADQDRQIKT HHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH NLQALRDFVADVYKKEQAGQHFTAEESDLLGAEAQNRADAITGQVSQIAARLNIKISE HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MYRWLCALTLVAVLAGCGAETAPTTQPTQAPAAGELGAIKTYLLGKTGDLINSSTALETA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHH SQRYYDLAKAANFDYATLWSSKQAEVGTALNDAKAAWLKSSPTYEQMEGIVAGVSSLADF HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC DVTLDAGASAEEGGDSVVNYDLTLADGRTIAKPGNLFGVTESTLWGTYDAFRVTDVEADI CEEECCCCCCCCCCCCEEEEEEEEECCCEECCCCCEEECCCCHHCCCCCCEEEEEEEECC NGNGTVEFGESLPEANVLLAAAQKLKATATELDTAAKAWEPTDTDAFSALVVMVPTMNEY CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCHHHH FDSWKNSRFVAGDSSTQRDFVAISRLADIGDILGSLQVVYDSLSPKVAALDADQDRQIKT HHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH NLQALRDFVADVYKKEQAGQHFTAEESDLLGAEAQNRADAITGQVSQIAARLNIKISE HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA