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The map label for this gene is catD [H]

Identifier: 159896999

GI number: 159896999

Start: 545164

End: 545610

Strand: Reverse

Name: catD [H]

Synonym: Haur_0467

Alternate gene names: 159896999

Gene position: 545610-545164 (Counterclockwise)

Preceding gene: 159897000

Following gene: 159896993

Centisome position: 8.6

GC content: 49.44

Gene sequence:

>447_bases
ATGGCAAGCATCAATAAATTACTCGATAAGCCAGGTTTTGGCATCGCCATTTTGCGGATTGTCGTTGGTTTTATTTTCTT
TATGCACGGTTTGGATAAATTCAATGGCGGGATTGAGGGAACCGCTGGCTTCTTGACTAGCCTTGGAATTCCAGCGCCAA
CCTTTATGGCAATTTTGTTGATTGCAACGGAATTGATCGGCGGGATTATGTTGATGCTCGGCTTGTTTACTCGTTATGTT
GCAGTGGCTGAAGCAATCGCTATGGTTGTGGCTTTGGTTACCGTGCACTTGGATGCTGGCTTCTCATCACGCGAAGGTGG
CTACGAATATGTGTTGGCGTTGATCGCTGCTAGCGTGGCTTTGGTGCTGCTTGGCTCAGGCTCATTGGCGCTTGACAACT
TGCTCAGCCCACGCTTGACTGGCCGCCAAATCACTGCCCGCGCCTAA

Upstream 100 bases:

>100_bases
TTATTGACCTTTGGGACGTGAGCAAGGACGTTGTTTCGGACTATCTAGCTTTATAGTGAGCGCAGTCTAATCAACCACTG
CTTGAAAGGAGCAAACGGTC

Downstream 100 bases:

>100_bases
AAACTACAGATAAACAATGCAACCCCGCCAAGCGACTAGGCTGCTTGGCGGGGTTGCTTATGTTAACAATCACAGCTACA
GCAATCGCCACATTCGCAGC

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MASINKLLDKPGFGIAILRIVVGFIFFMHGLDKFNGGIEGTAGFLTSLGIPAPTFMAILLIATELIGGIMLMLGLFTRYV
AVAEAIAMVVALVTVHLDAGFSSREGGYEYVLALIAASVALVLLGSGSLALDNLLSPRLTGRQITARA

Sequences:

>Translated_148_residues
MASINKLLDKPGFGIAILRIVVGFIFFMHGLDKFNGGIEGTAGFLTSLGIPAPTFMAILLIATELIGGIMLMLGLFTRYV
AVAEAIAMVVALVTVHLDAGFSSREGGYEYVLALIAASVALVLLGSGSLALDNLLSPRLTGRQITARA
>Mature_147_residues
ASINKLLDKPGFGIAILRIVVGFIFFMHGLDKFNGGIEGTAGFLTSLGIPAPTFMAILLIATELIGGIMLMLGLFTRYVA
VAEAIAMVVALVTVHLDAGFSSREGGYEYVLALIAASVALVLLGSGSLALDNLLSPRLTGRQITARA

Specific function: Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 15454; Mature: 15323

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASINKLLDKPGFGIAILRIVVGFIFFMHGLDKFNGGIEGTAGFLTSLGIPAPTFMAILL
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
IATELIGGIMLMLGLFTRYVAVAEAIAMVVALVTVHLDAGFSSREGGYEYVLALIAASVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LVLLGSGSLALDNLLSPRLTGRQITARA
HHHHCCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASINKLLDKPGFGIAILRIVVGFIFFMHGLDKFNGGIEGTAGFLTSLGIPAPTFMAILL
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
IATELIGGIMLMLGLFTRYVAVAEAIAMVVALVTVHLDAGFSSREGGYEYVLALIAASVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LVLLGSGSLALDNLLSPRLTGRQITARA
HHHHCCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377 [H]