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The map label for this gene is 159896929

Identifier: 159896929

GI number: 159896929

Start: 465641

End: 467380

Strand: Reverse

Name: 159896929

Synonym: Haur_0397

Alternate gene names: NA

Gene position: 467380-465641 (Counterclockwise)

Preceding gene: 159896934

Following gene: 159896928

Centisome position: 7.36

GC content: 49.83

Gene sequence:

>1740_bases
ATGTCTGCGTTAACCTATCCCTCCCTGCCCTCGCCATTTGAAATGATTGGCCCGTGCGGCAAACAATCGACCCATCGCCG
TTTTTTTATGGCCAAGAAAGCAGGCATCCCATACCTGATTTGGTGGGAAAGCCGCATTCCTGAGGCCTTGCGCAAACAAC
AAATGGTTGTGCAAATTGCCAACCAAGCTGGTAGCGAAGTAGCTATCTTAGATGTGCAAGCCTTATCGTTGCAACAGCTA
TTGGATACTGCTGGAAGTTTACCAGCACCAGTTGCCGCCCAATATGCCTTGGGCTTGATCGAAACCGCTGAATTTAATCA
TCGCCAACGAACTGCCCTCACAACTAGTAATTTGTATGGGCCAAGCCTGCTTGATCTTGGTTCGCAAGGCACGATTGTGC
CAAAAATTGATCCACGGGCAGGCCAACAAGCTGGGCCAGTTCCCGCCCAACTCTTGCCAATCAATGAACCAGCCAGCCCA
CAAACTGATAGCTATTACATTGGGGCATTGATTGCCTGGATGATTAGCGGGCAATTTGCGCCCCAGGGAAATCCCTTGGC
AATGCTGCCAGCAATCGATGGCAATTTACGGAGCATTTTGCAACGCGCCACTGTTGCCAACCCCAGCCAACGCCCAAGCG
CCCAAGCCCTTGGTCAGCAAATTCAAGATTGGTTGTCGGGCAAAGTTACGCCAGTCGCCAAAAAGAAGCCCTCGCAATGG
GCTTGGCTAGCAGGCGCGATCACAACCGCTGCGATTATGTGGTTGGTGATCTATGGTTTATCCCGTCAAGATAAAGTGAC
CGATACCGAGTTTGGTCAGGCGCAAATTGAGCAAGGCACTGGTGATTTCCAGCCAGGTACTTCTAGCAACGGCTTAGCCA
TGCTGGGAGATATCGACGGAGTTGAAGTTAATCGGATTGATGATACTCGCCATCCCGAAATCGATATGTATTTGAGTATT
ATGCGGCCCACGGGGGTAGTCACCGACGTGCCGCGGCAAAATGTCAAAGTCTTTGAAAATAACAATCAGATTGAAGGCTT
TTCGTGGGTCAATCTCTCACGCGTCCAAGATCCATTAAACATTATGTTGGTGATCGATACCAGTGGGAGCATGGGGCCAA
GCAAAGAGGGTTTAACCGATGGTGGCCTCGATGCCGCCAAAATTGCTGCGCTTGACTTTATCGATCACCTGCCTTCCAAC
GCCAATGTTGGCTTGATTCACTTTGGGACGCTGGTAACGGTTGACCATTCGCTCACCAACGATATTGGGGCAGTACGCCA
AAGTATCAGCGAGCTTAAACCCGAAGGTCAAACCGCAATTTACGATGCCTTGGCCATCAGCTATACCCAACTGCGTCGTG
CCAAAGGTCAAACCTTCATCGTCTTGATTTCCGATGGCGCGGATACCGCCAGCAAAGGCGATAACTACGACAGCATCGTA
GCGAAGGCCACAAAAGCCAACATTCCCACCTACATCATTGGTCTCACCAGCCCAGAGTTTGATGGTCAATTGTTGGAAGA
TTTGCAACGCGATACCAAAGCCATGATTTACCAAACCCCCTCCAAAGAACAACTTGGTGGCTTTTATACTGAGGTCGCGC
AAGAGGTTTCTGGCCAATATCGTGCCAGCTTTAACATTCCTGATACCTATAAAACTGGCGATGAAATTATGCTCAAGGTC
GAGGTCAATGCTGGCGATGGCCTCTTAGTCACCAAAGAACGCAAGTATATTCATCCCTAA

Upstream 100 bases:

>100_bases
TAGCTAGCCACTTGCATGGCATGATATAATCGCTTTTGAGAAAAAATCTCCCATTGTGTGAAACCTGATAATTAACCCTG
ATGTAGAAAGTGTAGAGGCA

Downstream 100 bases:

>100_bases
TTATTAATAACCAACCAAGTGTCTATCGCAGCATCGTTAAGGTGCTGCGATTTTTGATCGGCGCAAACTTATGCTACAGT
GCAGGCCACAATCACCACAG

Product: von Willebrand factor type A

Products: NA

Alternate protein names: PEGA Domain Protein; Type II Secretion System Integral Membrane Subunit; Von Willebrand Factor Type A Domain Protein

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MSALTYPSLPSPFEMIGPCGKQSTHRRFFMAKKAGIPYLIWWESRIPEALRKQQMVVQIANQAGSEVAILDVQALSLQQL
LDTAGSLPAPVAAQYALGLIETAEFNHRQRTALTTSNLYGPSLLDLGSQGTIVPKIDPRAGQQAGPVPAQLLPINEPASP
QTDSYYIGALIAWMISGQFAPQGNPLAMLPAIDGNLRSILQRATVANPSQRPSAQALGQQIQDWLSGKVTPVAKKKPSQW
AWLAGAITTAAIMWLVIYGLSRQDKVTDTEFGQAQIEQGTGDFQPGTSSNGLAMLGDIDGVEVNRIDDTRHPEIDMYLSI
MRPTGVVTDVPRQNVKVFENNNQIEGFSWVNLSRVQDPLNIMLVIDTSGSMGPSKEGLTDGGLDAAKIAALDFIDHLPSN
ANVGLIHFGTLVTVDHSLTNDIGAVRQSISELKPEGQTAIYDALAISYTQLRRAKGQTFIVLISDGADTASKGDNYDSIV
AKATKANIPTYIIGLTSPEFDGQLLEDLQRDTKAMIYQTPSKEQLGGFYTEVAQEVSGQYRASFNIPDTYKTGDEIMLKV
EVNAGDGLLVTKERKYIHP

Sequences:

>Translated_579_residues
MSALTYPSLPSPFEMIGPCGKQSTHRRFFMAKKAGIPYLIWWESRIPEALRKQQMVVQIANQAGSEVAILDVQALSLQQL
LDTAGSLPAPVAAQYALGLIETAEFNHRQRTALTTSNLYGPSLLDLGSQGTIVPKIDPRAGQQAGPVPAQLLPINEPASP
QTDSYYIGALIAWMISGQFAPQGNPLAMLPAIDGNLRSILQRATVANPSQRPSAQALGQQIQDWLSGKVTPVAKKKPSQW
AWLAGAITTAAIMWLVIYGLSRQDKVTDTEFGQAQIEQGTGDFQPGTSSNGLAMLGDIDGVEVNRIDDTRHPEIDMYLSI
MRPTGVVTDVPRQNVKVFENNNQIEGFSWVNLSRVQDPLNIMLVIDTSGSMGPSKEGLTDGGLDAAKIAALDFIDHLPSN
ANVGLIHFGTLVTVDHSLTNDIGAVRQSISELKPEGQTAIYDALAISYTQLRRAKGQTFIVLISDGADTASKGDNYDSIV
AKATKANIPTYIIGLTSPEFDGQLLEDLQRDTKAMIYQTPSKEQLGGFYTEVAQEVSGQYRASFNIPDTYKTGDEIMLKV
EVNAGDGLLVTKERKYIHP
>Mature_578_residues
SALTYPSLPSPFEMIGPCGKQSTHRRFFMAKKAGIPYLIWWESRIPEALRKQQMVVQIANQAGSEVAILDVQALSLQQLL
DTAGSLPAPVAAQYALGLIETAEFNHRQRTALTTSNLYGPSLLDLGSQGTIVPKIDPRAGQQAGPVPAQLLPINEPASPQ
TDSYYIGALIAWMISGQFAPQGNPLAMLPAIDGNLRSILQRATVANPSQRPSAQALGQQIQDWLSGKVTPVAKKKPSQWA
WLAGAITTAAIMWLVIYGLSRQDKVTDTEFGQAQIEQGTGDFQPGTSSNGLAMLGDIDGVEVNRIDDTRHPEIDMYLSIM
RPTGVVTDVPRQNVKVFENNNQIEGFSWVNLSRVQDPLNIMLVIDTSGSMGPSKEGLTDGGLDAAKIAALDFIDHLPSNA
NVGLIHFGTLVTVDHSLTNDIGAVRQSISELKPEGQTAIYDALAISYTQLRRAKGQTFIVLISDGADTASKGDNYDSIVA
KATKANIPTYIIGLTSPEFDGQLLEDLQRDTKAMIYQTPSKEQLGGFYTEVAQEVSGQYRASFNIPDTYKTGDEIMLKVE
VNAGDGLLVTKERKYIHP

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62751; Mature: 62620

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTYPSLPSPFEMIGPCGKQSTHRRFFMAKKAGIPYLIWWESRIPEALRKQQMVVQIA
CCCCCCCCCCCCHHHHCCCCCCCCHHEEEEHHHCCCCEEEEECHHCHHHHHHHHHHHHHH
NQAGSEVAILDVQALSLQQLLDTAGSLPAPVAAQYALGLIETAEFNHRQRTALTTSNLYG
HHCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEECCCCC
PSLLDLGSQGTIVPKIDPRAGQQAGPVPAQLLPINEPASPQTDSYYIGALIAWMISGQFA
CHHHCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC
PQGNPLAMLPAIDGNLRSILQRATVANPSQRPSAQALGQQIQDWLSGKVTPVAKKKPSQW
CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCH
AWLAGAITTAAIMWLVIYGLSRQDKVTDTEFGQAQIEQGTGDFQPGTSSNGLAMLGDIDG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCC
VEVNRIDDTRHPEIDMYLSIMRPTGVVTDVPRQNVKVFENNNQIEGFSWVNLSRVQDPLN
EEEECCCCCCCCCEEEEEEEECCCCCEECCCCCCEEEEECCCEECCEEEEEHHHCCCCEE
IMLVIDTSGSMGPSKEGLTDGGLDAAKIAALDFIDHLPSNANVGLIHFGTLVTVDHSLTN
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCHHHH
DIGAVRQSISELKPEGQTAIYDALAISYTQLRRAKGQTFIVLISDGADTASKGDNYDSIV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH
AKATKANIPTYIIGLTSPEFDGQLLEDLQRDTKAMIYQTPSKEQLGGFYTEVAQEVSGQY
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCE
RASFNIPDTYKTGDEIMLKVEVNAGDGLLVTKERKYIHP
EEECCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCC
>Mature Secondary Structure 
SALTYPSLPSPFEMIGPCGKQSTHRRFFMAKKAGIPYLIWWESRIPEALRKQQMVVQIA
CCCCCCCCCCCHHHHCCCCCCCCHHEEEEHHHCCCCEEEEECHHCHHHHHHHHHHHHHH
NQAGSEVAILDVQALSLQQLLDTAGSLPAPVAAQYALGLIETAEFNHRQRTALTTSNLYG
HHCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEECCCCC
PSLLDLGSQGTIVPKIDPRAGQQAGPVPAQLLPINEPASPQTDSYYIGALIAWMISGQFA
CHHHCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC
PQGNPLAMLPAIDGNLRSILQRATVANPSQRPSAQALGQQIQDWLSGKVTPVAKKKPSQW
CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCH
AWLAGAITTAAIMWLVIYGLSRQDKVTDTEFGQAQIEQGTGDFQPGTSSNGLAMLGDIDG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCC
VEVNRIDDTRHPEIDMYLSIMRPTGVVTDVPRQNVKVFENNNQIEGFSWVNLSRVQDPLN
EEEECCCCCCCCCEEEEEEEECCCCCEECCCCCCEEEEECCCEECCEEEEEHHHCCCCEE
IMLVIDTSGSMGPSKEGLTDGGLDAAKIAALDFIDHLPSNANVGLIHFGTLVTVDHSLTN
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCHHHH
DIGAVRQSISELKPEGQTAIYDALAISYTQLRRAKGQTFIVLISDGADTASKGDNYDSIV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH
AKATKANIPTYIIGLTSPEFDGQLLEDLQRDTKAMIYQTPSKEQLGGFYTEVAQEVSGQY
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCE
RASFNIPDTYKTGDEIMLKVEVNAGDGLLVTKERKYIHP
EEECCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA