| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896934
Identifier: 159896934
GI number: 159896934
Start: 472505
End: 473893
Strand: Reverse
Name: 159896934
Synonym: Haur_0402
Alternate gene names: NA
Gene position: 473893-472505 (Counterclockwise)
Preceding gene: 159896935
Following gene: 159896929
Centisome position: 7.47
GC content: 49.82
Gene sequence:
>1389_bases ATGATTATTCCTTGGATCTACTACATTCAGGCCGATGAGCAATTATTGGTTGAAAGTCTGAGCCGCCGCTGGACAGTCAA CGGGCCACGTCGCTATACCGCCCGACCATTCGAGCGGATCACGCGGCGCAGCGGTTTGGTGCTTGGGCCAACCGAATATG TCTATGTGACCGATTCGCTGACTGGCCAAGAACGGCTTGAGCGCGGCCCCCAACTGTTTTTTCCAACTGCCTACGAAGAA ATTGGCACAACTCAACAGGCGCTGCCGCTCAAGAAAAACCAATATGTACGAATTTTGGATCGCAGCACGGGGCAATTGCG GGTTGAGCGCGGCGAACAAAGCATTTATCTCCAGCCCAACGAAAGCCAAATTGGCAATATCGAGGCTGGCTACAATATTG ATGAACATCATGCGGTGTTGGTACGCAGCACCACCGATGGCCAATTAAATCTGATCACGACACCCCAAGTTTTTATTCCC ACCGCCGAACAAGAGGTGATCGAGCATCGCCAACGGATTTTGCTGGAAAATCATGAAGTTGTGGTGATTAAGGATCGTGA TGGGCGCTATCAGTTTCGACGCGGCAGCCAACGCGATCGTTCATTCTTCCTCGAACCCTATACCGATTTGGTAACCTTTC GCTGGTCGTCGGGCTTGCACAAAGATAAACGTAATTTGGTGATTACCCATTTAGATATTCGGCCAAAATTTATGTGGTAT GCCTTCGAGGCCCGTACCCAAGATAATGTCGAAATTATGATCGATATTACTTTTTTCTGGCAGTTGGCCGATGTTGAGGC CATGATTGTTAGCACCGACGATGCGCCAGGCGATATTTGCGCCCACGCCCGCAGTGCAATTATCCAAGCAGTTTCGCAAA CCAGCCTTGAACGCTTTTTGGCCAATTTCAACAGCATCGTGCGTGATGCAGTGATTGTGCCAGAAGATGGTTTTTATGCT GAACGTGGCGTGAAATTACACTCGGTCGAAGTGCGCTCAATTACCTGCAAAGATGCCAATACCCAGCGCGTGCTGCAAGA AATTATTCAAGAAACCACCAATCGGCTCAATCGGCTACAAAAACAAGAGAGCGAGAACGAAATCAAGGTCAAACAGCTCG AAGGTGAGATTGTGGCCCAAGAAACCCGCAGCCGTTTGTTGGAATTGCAACGCCGCATCGCCCAAGCCGAAGCCGAAACC CAAGGTTTAGCCGAAGCCGAACGGGTGCATGCCTTTATTCAAGGGCTGGGAGCCGAATTGCCGATCAGCGAAAAGTTGGC GATTTTCAATATTTTGCGTCGCCAAGAAGCGATCGCCAGCCTGAGCCAAGGCAAAGCTCAATTGTATCTCACGCCTGCTG ATATTAACTTGAGCCTTGAACATCATTGA
Upstream 100 bases:
>100_bases GGTATTGCGATCGCCTATAGCCTTCAGCCCTGTGTACCATGTCATAGCATTTGTCGCAGCCACGGTGTATGCTAGGGTTA GCATCGCAGTGGAGGACACC
Downstream 100 bases:
>100_bases TAAGTAGGTGATAGACTTGATTTAACCACGAAGAACACAAAGAGCACGAAGGTTGAAGTTTGAGCGATTAACACTCAGCC AATTATTCGGGTAATTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MIIPWIYYIQADEQLLVESLSRRWTVNGPRRYTARPFERITRRSGLVLGPTEYVYVTDSLTGQERLERGPQLFFPTAYEE IGTTQQALPLKKNQYVRILDRSTGQLRVERGEQSIYLQPNESQIGNIEAGYNIDEHHAVLVRSTTDGQLNLITTPQVFIP TAEQEVIEHRQRILLENHEVVVIKDRDGRYQFRRGSQRDRSFFLEPYTDLVTFRWSSGLHKDKRNLVITHLDIRPKFMWY AFEARTQDNVEIMIDITFFWQLADVEAMIVSTDDAPGDICAHARSAIIQAVSQTSLERFLANFNSIVRDAVIVPEDGFYA ERGVKLHSVEVRSITCKDANTQRVLQEIIQETTNRLNRLQKQESENEIKVKQLEGEIVAQETRSRLLELQRRIAQAEAET QGLAEAERVHAFIQGLGAELPISEKLAIFNILRRQEAIASLSQGKAQLYLTPADINLSLEHH
Sequences:
>Translated_462_residues MIIPWIYYIQADEQLLVESLSRRWTVNGPRRYTARPFERITRRSGLVLGPTEYVYVTDSLTGQERLERGPQLFFPTAYEE IGTTQQALPLKKNQYVRILDRSTGQLRVERGEQSIYLQPNESQIGNIEAGYNIDEHHAVLVRSTTDGQLNLITTPQVFIP TAEQEVIEHRQRILLENHEVVVIKDRDGRYQFRRGSQRDRSFFLEPYTDLVTFRWSSGLHKDKRNLVITHLDIRPKFMWY AFEARTQDNVEIMIDITFFWQLADVEAMIVSTDDAPGDICAHARSAIIQAVSQTSLERFLANFNSIVRDAVIVPEDGFYA ERGVKLHSVEVRSITCKDANTQRVLQEIIQETTNRLNRLQKQESENEIKVKQLEGEIVAQETRSRLLELQRRIAQAEAET QGLAEAERVHAFIQGLGAELPISEKLAIFNILRRQEAIASLSQGKAQLYLTPADINLSLEHH >Mature_462_residues MIIPWIYYIQADEQLLVESLSRRWTVNGPRRYTARPFERITRRSGLVLGPTEYVYVTDSLTGQERLERGPQLFFPTAYEE IGTTQQALPLKKNQYVRILDRSTGQLRVERGEQSIYLQPNESQIGNIEAGYNIDEHHAVLVRSTTDGQLNLITTPQVFIP TAEQEVIEHRQRILLENHEVVVIKDRDGRYQFRRGSQRDRSFFLEPYTDLVTFRWSSGLHKDKRNLVITHLDIRPKFMWY AFEARTQDNVEIMIDITFFWQLADVEAMIVSTDDAPGDICAHARSAIIQAVSQTSLERFLANFNSIVRDAVIVPEDGFYA ERGVKLHSVEVRSITCKDANTQRVLQEIIQETTNRLNRLQKQESENEIKVKQLEGEIVAQETRSRLLELQRRIAQAEAET QGLAEAERVHAFIQGLGAELPISEKLAIFNILRRQEAIASLSQGKAQLYLTPADINLSLEHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53225; Mature: 53225
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPWIYYIQADEQLLVESLSRRWTVNGPRRYTARPFERITRRSGLVLGPTEYVYVTDSL CEEEEEEEEECCHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHCCEEECCCEEEEEECCC TGQERLERGPQLFFPTAYEEIGTTQQALPLKKNQYVRILDRSTGQLRVERGEQSIYLQPN CCHHHHHCCCCEECCCCHHHHCCCHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCC ESQIGNIEAGYNIDEHHAVLVRSTTDGQLNLITTPQVFIPTAEQEVIEHRQRILLENHEV CCCCCCEECCCCCCCCCEEEEEECCCCEEEEEECCEEEECCCHHHHHHHHHHHEECCCCE VVIKDRDGRYQFRRGSQRDRSFFLEPYTDLVTFRWSSGLHKDKRNLVITHLDIRPKFMWY EEEECCCCCCHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCEEEEE AFEARTQDNVEIMIDITFFWQLADVEAMIVSTDDAPGDICAHARSAIIQAVSQTSLERFL EEECCCCCCCEEEEEEEEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH ANFNSIVRDAVIVPEDGFYAERGVKLHSVEVRSITCKDANTQRVLQEIIQETTNRLNRLQ HHHHHHHHCEEEECCCCCCHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH KQESENEIKVKQLEGEIVAQETRSRLLELQRRIAQAEAETQGLAEAERVHAFIQGLGAEL HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PISEKLAIFNILRRQEAIASLSQGKAQLYLTPADINLSLEHH CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEECC >Mature Secondary Structure MIIPWIYYIQADEQLLVESLSRRWTVNGPRRYTARPFERITRRSGLVLGPTEYVYVTDSL CEEEEEEEEECCHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHCCEEECCCEEEEEECCC TGQERLERGPQLFFPTAYEEIGTTQQALPLKKNQYVRILDRSTGQLRVERGEQSIYLQPN CCHHHHHCCCCEECCCCHHHHCCCHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCC ESQIGNIEAGYNIDEHHAVLVRSTTDGQLNLITTPQVFIPTAEQEVIEHRQRILLENHEV CCCCCCEECCCCCCCCCEEEEEECCCCEEEEEECCEEEECCCHHHHHHHHHHHEECCCCE VVIKDRDGRYQFRRGSQRDRSFFLEPYTDLVTFRWSSGLHKDKRNLVITHLDIRPKFMWY EEEECCCCCCHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCEEEEE AFEARTQDNVEIMIDITFFWQLADVEAMIVSTDDAPGDICAHARSAIIQAVSQTSLERFL EEECCCCCCCEEEEEEEEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH ANFNSIVRDAVIVPEDGFYAERGVKLHSVEVRSITCKDANTQRVLQEIIQETTNRLNRLQ HHHHHHHHCEEEECCCCCCHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH KQESENEIKVKQLEGEIVAQETRSRLLELQRRIAQAEAETQGLAEAERVHAFIQGLGAEL HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PISEKLAIFNILRRQEAIASLSQGKAQLYLTPADINLSLEHH CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA