| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yqkF [H]
Identifier: 159896874
GI number: 159896874
Start: 407333
End: 408223
Strand: Direct
Name: yqkF [H]
Synonym: Haur_0341
Alternate gene names: 159896874
Gene position: 407333-408223 (Clockwise)
Preceding gene: 159896873
Following gene: 159896875
Centisome position: 6.42
GC content: 51.18
Gene sequence:
>891_bases ATGAACTTTCCGTTGCTGCGCGAATTTGGCTCAACTGGTTTGCAGGTTTCAGCGCTAGGCTTTGGCGCTGGCCATATTGG TGGAAACGAATTAACTGAAGCTGAAGCAGCCAAGTTGCTGCATGGCTTGCTCGATTTAGGGATTAACTTAATTGATACAG CACGCGGCTATGGCCTTTCCGAAGAGCGGATCGGGCGACATCTCCAGCAACGTCGTCATGAGTTTGTGCTTTCAACCAAA ATTGGCTATGGCATCGAGGGCTACGACGATTGGACCAGCCCAATCATCACTGCCGGAATTGATGCAGCGCTGCAACGCAT GCACACCGATTATTTGGATATTGTGCATTTTCATTCTTGCCCGGTCGAGACCTTACGAGCAGGCGAGGTGATTGAGGCAC TTGAGCGGGCGGTTCAAGCAGGTAAAGTACGGGTTGCCGCCTATTCTGGCGATAATGCACCCTTAGCTTGGGCGGTGCAG TCAGGCCATTTTGGTGCGATTGAATGCTCGGTGAACCTCGCCGATCAACGGGTGATCAGCCAAGTATTGCCCCAAACCCA ACAACGCCAAATTGGTGTAATTGCCAAACGCCCAGTGGCCAACGTCGCGTGGCGTTTTGCCCAACGGCCAGTTGGCGATT ATGCTGAAGTGTATTGGGAACGACTCCAAGCCATGCAGCTTGATTTCGACCCTGAACGACTTTTGGATATTGCCTTGCGG TTTACCGCCTATACCCCAGGTGTCCATAGCTGTATTGTTGGTTCGCGCAGCCTCGAACATATGCAGCATAATTTAGCATT ATTGCAACAAGGCCCACTTGAACCCCAACTCTATGCCTATCTCTCCAGCCAATTTCAGACGAACGATCAAGGTTGGGTTG GTCAGATCTAA
Upstream 100 bases:
>100_bases TCCGATGAACTCACCCCAGCCCCTGAATGGCTGAATCGTTAATTGAAGCCAATTGCACCAAGGATCTCCATGCTGAGATG CTTGGTTGAATAGGAATCCG
Downstream 100 bases:
>100_bases GCCATCAGCAAGCATCATGCATGGTGGTGCTTGCTACTCTAGCAGTAGAAACGGGACTTTTCGACTATAGCTTGGTGTTG GCAAAGCTGCCACAATAAGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNFPLLREFGSTGLQVSALGFGAGHIGGNELTEAEAAKLLHGLLDLGINLIDTARGYGLSEERIGRHLQQRRHEFVLSTK IGYGIEGYDDWTSPIITAGIDAALQRMHTDYLDIVHFHSCPVETLRAGEVIEALERAVQAGKVRVAAYSGDNAPLAWAVQ SGHFGAIECSVNLADQRVISQVLPQTQQRQIGVIAKRPVANVAWRFAQRPVGDYAEVYWERLQAMQLDFDPERLLDIALR FTAYTPGVHSCIVGSRSLEHMQHNLALLQQGPLEPQLYAYLSSQFQTNDQGWVGQI
Sequences:
>Translated_296_residues MNFPLLREFGSTGLQVSALGFGAGHIGGNELTEAEAAKLLHGLLDLGINLIDTARGYGLSEERIGRHLQQRRHEFVLSTK IGYGIEGYDDWTSPIITAGIDAALQRMHTDYLDIVHFHSCPVETLRAGEVIEALERAVQAGKVRVAAYSGDNAPLAWAVQ SGHFGAIECSVNLADQRVISQVLPQTQQRQIGVIAKRPVANVAWRFAQRPVGDYAEVYWERLQAMQLDFDPERLLDIALR FTAYTPGVHSCIVGSRSLEHMQHNLALLQQGPLEPQLYAYLSSQFQTNDQGWVGQI >Mature_296_residues MNFPLLREFGSTGLQVSALGFGAGHIGGNELTEAEAAKLLHGLLDLGINLIDTARGYGLSEERIGRHLQQRRHEFVLSTK IGYGIEGYDDWTSPIITAGIDAALQRMHTDYLDIVHFHSCPVETLRAGEVIEALERAVQAGKVRVAAYSGDNAPLAWAVQ SGHFGAIECSVNLADQRVISQVLPQTQQRQIGVIAKRPVANVAWRFAQRPVGDYAEVYWERLQAMQLDFDPERLLDIALR FTAYTPGVHSCIVGSRSLEHMQHNLALLQQGPLEPQLYAYLSSQFQTNDQGWVGQI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=318, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1789375, Length=217, Percent_Identity=30.4147465437788, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788070, Length=215, Percent_Identity=27.4418604651163, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI24646155, Length=155, Percent_Identity=32.258064516129, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 32743; Mature: 32743
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFPLLREFGSTGLQVSALGFGAGHIGGNELTEAEAAKLLHGLLDLGINLIDTARGYGLS CCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC EERIGRHLQQRRHEFVLSTKIGYGIEGYDDWTSPIITAGIDAALQRMHTDYLDIVHFHSC HHHHHHHHHHHHHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVETLRAGEVIEALERAVQAGKVRVAAYSGDNAPLAWAVQSGHFGAIECSVNLADQRVIS CHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCEEEEEEECHHHHHHHH QVLPQTQQRQIGVIAKRPVANVAWRFAQRPVGDYAEVYWERLQAMQLDFDPERLLDIALR HHCCCHHHHHHCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH FTAYTPGVHSCIVGSRSLEHMQHNLALLQQGPLEPQLYAYLSSQFQTNDQGWVGQI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNFPLLREFGSTGLQVSALGFGAGHIGGNELTEAEAAKLLHGLLDLGINLIDTARGYGLS CCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC EERIGRHLQQRRHEFVLSTKIGYGIEGYDDWTSPIITAGIDAALQRMHTDYLDIVHFHSC HHHHHHHHHHHHHHEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVETLRAGEVIEALERAVQAGKVRVAAYSGDNAPLAWAVQSGHFGAIECSVNLADQRVIS CHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCEEEEEEECHHHHHHHH QVLPQTQQRQIGVIAKRPVANVAWRFAQRPVGDYAEVYWERLQAMQLDFDPERLLDIALR HHCCCHHHHHHCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH FTAYTPGVHSCIVGSRSLEHMQHNLALLQQGPLEPQLYAYLSSQFQTNDQGWVGQI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]