| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is dck [H]
Identifier: 159896875
GI number: 159896875
Start: 408456
End: 409067
Strand: Direct
Name: dck [H]
Synonym: Haur_0342
Alternate gene names: 159896875
Gene position: 408456-409067 (Clockwise)
Preceding gene: 159896874
Following gene: 159896876
Centisome position: 6.44
GC content: 48.37
Gene sequence:
>612_bases ATGGGCAAATTAATTACTATTGTGGGCAACGCTGGCATTGGCAAAACCACCCTCACCAAGCTACTCTGCCGTGATCAGCG TTTTTTCGCAGCCTTAGAGAGCCACGTCGAACGACCATTCCAACAACTATTTGCCCAAAATCTGCAACGCTATGCCTTAG CCAACCAATTCGATTACCTCTTACTCCGTGCTGAACAAGAGCGATTCATTCGGGCGCAATCTGGTATTGGAGTCCAAGAT GGCGGCCTTGATGAAGATTTTTGGGTTTTTACCCAGCATTTTCAGCATCAAGGCTATTTGAGTGCTGCCGAGTTTGAGTT ATGCCAACGTCTATATACTGAATTGCGAGCTGGGCTTGGTCAGCCCGATTTGATCATCAAGCTCGATGCCCCCTTGGATG TGATTATTCAGCGTTACGAGCAGCGCAATCGCCCATTGGAAATAGCGCAGCGCGACGATTTAGCCCAACTTGGCACATTG CTTGATCGCTGGACTGCGACCATTACCACCCCTTTGCTCAGCCTCGATTGGAGCAGCAGCGCTTTACCGACGATTGAACA GCAACAACAACTCATTGAGACTATTCTAAAACAGCTCCGTATAGTACACTAA
Upstream 100 bases:
>100_bases TCAGTGTTTGGGGAATTTGCCCTGATGTTGCTTGCAGTTGCAACTTTGGCCTGTTTCGGGTACAACAGCAACCAGTTAAT CAACAATCAAGGACAACATC
Downstream 100 bases:
>100_bases GCAAACTAGTTAGGGTTAGATGTAGATTTTGGAGGTTGTATGCGATTACGGATTGGTTTAATCATCACGCTTTTGTTGAT GATCACCGTTGGAAAAACCC
Product: deoxynucleoside kinase-like protein
Products: NA
Alternate protein names: dAK/dCK [H]
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MGKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYLLLRAEQERFIRAQSGIGVQD GGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTL LDRWTATITTPLLSLDWSSSALPTIEQQQQLIETILKQLRIVH
Sequences:
>Translated_203_residues MGKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYLLLRAEQERFIRAQSGIGVQD GGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTL LDRWTATITTPLLSLDWSSSALPTIEQQQQLIETILKQLRIVH >Mature_202_residues GKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYLLLRAEQERFIRAQSGIGVQDG GLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTLL DRWTATITTPLLSLDWSSSALPTIEQQQQLIETILKQLRIVH
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.74; =2.7.1.76 [H]
Molecular weight: Translated: 23310; Mature: 23179
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYL CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRAEQERFIRAQSGIGVQDGGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLG HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC QPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTLLDRWTATITTPLLSLDWSSS CCCEEEEECCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC ALPTIEQQQQLIETILKQLRIVH CCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYL CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRAEQERFIRAQSGIGVQDGGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLG HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC QPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTLLDRWTATITTPLLSLDWSSS CCCEEEEECCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC ALPTIEQQQQLIETILKQLRIVH CCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]