Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is dck [H]

Identifier: 159896875

GI number: 159896875

Start: 408456

End: 409067

Strand: Direct

Name: dck [H]

Synonym: Haur_0342

Alternate gene names: 159896875

Gene position: 408456-409067 (Clockwise)

Preceding gene: 159896874

Following gene: 159896876

Centisome position: 6.44

GC content: 48.37

Gene sequence:

>612_bases
ATGGGCAAATTAATTACTATTGTGGGCAACGCTGGCATTGGCAAAACCACCCTCACCAAGCTACTCTGCCGTGATCAGCG
TTTTTTCGCAGCCTTAGAGAGCCACGTCGAACGACCATTCCAACAACTATTTGCCCAAAATCTGCAACGCTATGCCTTAG
CCAACCAATTCGATTACCTCTTACTCCGTGCTGAACAAGAGCGATTCATTCGGGCGCAATCTGGTATTGGAGTCCAAGAT
GGCGGCCTTGATGAAGATTTTTGGGTTTTTACCCAGCATTTTCAGCATCAAGGCTATTTGAGTGCTGCCGAGTTTGAGTT
ATGCCAACGTCTATATACTGAATTGCGAGCTGGGCTTGGTCAGCCCGATTTGATCATCAAGCTCGATGCCCCCTTGGATG
TGATTATTCAGCGTTACGAGCAGCGCAATCGCCCATTGGAAATAGCGCAGCGCGACGATTTAGCCCAACTTGGCACATTG
CTTGATCGCTGGACTGCGACCATTACCACCCCTTTGCTCAGCCTCGATTGGAGCAGCAGCGCTTTACCGACGATTGAACA
GCAACAACAACTCATTGAGACTATTCTAAAACAGCTCCGTATAGTACACTAA

Upstream 100 bases:

>100_bases
TCAGTGTTTGGGGAATTTGCCCTGATGTTGCTTGCAGTTGCAACTTTGGCCTGTTTCGGGTACAACAGCAACCAGTTAAT
CAACAATCAAGGACAACATC

Downstream 100 bases:

>100_bases
GCAAACTAGTTAGGGTTAGATGTAGATTTTGGAGGTTGTATGCGATTACGGATTGGTTTAATCATCACGCTTTTGTTGAT
GATCACCGTTGGAAAAACCC

Product: deoxynucleoside kinase-like protein

Products: NA

Alternate protein names: dAK/dCK [H]

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MGKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYLLLRAEQERFIRAQSGIGVQD
GGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTL
LDRWTATITTPLLSLDWSSSALPTIEQQQQLIETILKQLRIVH

Sequences:

>Translated_203_residues
MGKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYLLLRAEQERFIRAQSGIGVQD
GGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTL
LDRWTATITTPLLSLDWSSSALPTIEQQQQLIETILKQLRIVH
>Mature_202_residues
GKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYLLLRAEQERFIRAQSGIGVQDG
GLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTLL
DRWTATITTPLLSLDWSSSALPTIEQQQQLIETILKQLRIVH

Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n

COG id: COG1428

COG function: function code F; Deoxynucleoside kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DCK/DGK family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002624 [H]

Pfam domain/function: PF01712 dNK [H]

EC number: =2.7.1.74; =2.7.1.76 [H]

Molecular weight: Translated: 23310; Mature: 23179

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYL
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRAEQERFIRAQSGIGVQDGGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
QPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTLLDRWTATITTPLLSLDWSSS
CCCEEEEECCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ALPTIEQQQQLIETILKQLRIVH
CCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHVERPFQQLFAQNLQRYALANQFDYL
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRAEQERFIRAQSGIGVQDGGLDEDFWVFTQHFQHQGYLSAAEFELCQRLYTELRAGLG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
QPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRDDLAQLGTLLDRWTATITTPLLSLDWSSS
CCCEEEEECCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ALPTIEQQQQLIETILKQLRIVH
CCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]