| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896671
Identifier: 159896671
GI number: 159896671
Start: 171488
End: 171760
Strand: Reverse
Name: 159896671
Synonym: Haur_0138
Alternate gene names: NA
Gene position: 171760-171488 (Counterclockwise)
Preceding gene: 159896672
Following gene: 159896670
Centisome position: 2.71
GC content: 39.93
Gene sequence:
>273_bases ATGAGCCAACTTTCCCTTGATACCAGCGCAAAAGCCGAGGAAATCCAAATTAACATCCTACGGTCAATGAGCATTATTGA GAAATTACGTTTGGTTGAGCAACTCAATCAAACCCGTGATCGGCTAGCTTTCTATGGGTTGCGCAAACGCTTCCCTCATG CGAGTAATCGCGAATTACAACGCCGTTTCTTTGATATTAAACTAGATTATGAACTAGCAAACAAAGTATATGGCTCAATT GAGCAATGGTGTAATGATGAAATCATTGAATAA
Upstream 100 bases:
>100_bases TCAATACCTGCGAAGCGTAGCGATACTACGCTTCGCAGAGTTTTGCTGAATCACTTATCAAAACCAATAGTATAGCCATA CTTCAAAAGGATGGTAGGTT
Downstream 100 bases:
>100_bases CCCCTTAGATATTATGACGTATATTGCTGAGATATTCGATGAATTATTGATTGAATATTTCGTTTGAGGATCGTTTTTAA CCCAGAGGCGCAGAGATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSQLSLDTSAKAEEIQINILRSMSIIEKLRLVEQLNQTRDRLAFYGLRKRFPHASNRELQRRFFDIKLDYELANKVYGSI EQWCNDEIIE
Sequences:
>Translated_90_residues MSQLSLDTSAKAEEIQINILRSMSIIEKLRLVEQLNQTRDRLAFYGLRKRFPHASNRELQRRFFDIKLDYELANKVYGSI EQWCNDEIIE >Mature_89_residues SQLSLDTSAKAEEIQINILRSMSIIEKLRLVEQLNQTRDRLAFYGLRKRFPHASNRELQRRFFDIKLDYELANKVYGSIE QWCNDEIIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10748; Mature: 10617
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLSLDTSAKAEEIQINILRSMSIIEKLRLVEQLNQTRDRLAFYGLRKRFPHASNRELQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RRFFDIKLDYELANKVYGSIEQWCNDEIIE HHHHHHCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SQLSLDTSAKAEEIQINILRSMSIIEKLRLVEQLNQTRDRLAFYGLRKRFPHASNRELQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RRFFDIKLDYELANKVYGSIEQWCNDEIIE HHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA