| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896670
Identifier: 159896670
GI number: 159896670
Start: 170476
End: 171135
Strand: Reverse
Name: 159896670
Synonym: Haur_0137
Alternate gene names: NA
Gene position: 171135-170476 (Counterclockwise)
Preceding gene: 159896671
Following gene: 159896657
Centisome position: 2.7
GC content: 48.79
Gene sequence:
>660_bases ATGCATAGCACACAAAAATGGGGTGGCATTGCCGCCTTGATCAATGGGTTTGCCTATATTATCGGCATTGGCATAGTCTT CACCCTTTTAGCCCCTTTTCTCGAAGCCAGCCAAGCTGAAAAGATCAGCTTTTTGATCGAACATCAAAACTTGATGGCCC TGTGGTATCTGATTATTTATTTGGTCGCTGGAGTTTGGATGGTTCCGCTGGCAATTGCCTTGCATCACCGGCTGCAGCAA GCACATCCGCTGTTGATCCAGGTAACCACAGCTATGGGGATCATTTGGGCGACCACGATTCTTTCTAGTGGTATGTTGTT GGTCAACAATATCAAAATTATTGCCGATCTTCAGCAGCAGAACCCTGAGCAAACCCTCGCTGTCTCGACGGCAATTTCGG CGGTGGCGAGTGGATTAGGTGGGGCAATCGAGTTGCCTGGCGGCGTTTGGGTCAGCTTAATCAGTATTGCAGCCTTGCAA ACTAAACGCCTACCTAAAGCACTCAATTATCTTGGCCTGCTGATTGGCGCATCGGGCATCGCAATGACGGTTCCAGCGAT CGCCGCAGTTGGCACGCTCTTCGGTATCGGCATGATTGGCTGGTTTTTGTGGGTTGGAGTAGTTTTAGTTAGAACAAAGA ACATAGAGCATAGAACATAG
Upstream 100 bases:
>100_bases GACGATAAACACCCCACAACAACACTTTGGTGTCTCCTTACCACCAGCCCTTGTTTTGTATGCTCAACCGCAGAAAGCTA GCCTCTAGTTGGAGTAAGCG
Downstream 100 bases:
>100_bases AAATGGGGCTATGGGCTATGGGCTATCGGAACGTTTTGTAGAATGAGAATGATTCCGATAGCCAAAAGTCTCTAGCTGAT AGCCTCAACACAATTTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MHSTQKWGGIAALINGFAYIIGIGIVFTLLAPFLEASQAEKISFLIEHQNLMALWYLIIYLVAGVWMVPLAIALHHRLQQ AHPLLIQVTTAMGIIWATTILSSGMLLVNNIKIIADLQQQNPEQTLAVSTAISAVASGLGGAIELPGGVWVSLISIAALQ TKRLPKALNYLGLLIGASGIAMTVPAIAAVGTLFGIGMIGWFLWVGVVLVRTKNIEHRT
Sequences:
>Translated_219_residues MHSTQKWGGIAALINGFAYIIGIGIVFTLLAPFLEASQAEKISFLIEHQNLMALWYLIIYLVAGVWMVPLAIALHHRLQQ AHPLLIQVTTAMGIIWATTILSSGMLLVNNIKIIADLQQQNPEQTLAVSTAISAVASGLGGAIELPGGVWVSLISIAALQ TKRLPKALNYLGLLIGASGIAMTVPAIAAVGTLFGIGMIGWFLWVGVVLVRTKNIEHRT >Mature_219_residues MHSTQKWGGIAALINGFAYIIGIGIVFTLLAPFLEASQAEKISFLIEHQNLMALWYLIIYLVAGVWMVPLAIALHHRLQQ AHPLLIQVTTAMGIIWATTILSSGMLLVNNIKIIADLQQQNPEQTLAVSTAISAVASGLGGAIELPGGVWVSLISIAALQ TKRLPKALNYLGLLIGASGIAMTVPAIAAVGTLFGIGMIGWFLWVGVVLVRTKNIEHRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23422; Mature: 23422
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSTQKWGGIAALINGFAYIIGIGIVFTLLAPFLEASQAEKISFLIEHQNLMALWYLIIY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAGVWMVPLAIALHHRLQQAHPLLIQVTTAMGIIWATTILSSGMLLVNNIKIIADLQQQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEHHHC NPEQTLAVSTAISAVASGLGGAIELPGGVWVSLISIAALQTKRLPKALNYLGLLIGASGI CCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AMTVPAIAAVGTLFGIGMIGWFLWVGVVLVRTKNIEHRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHSTQKWGGIAALINGFAYIIGIGIVFTLLAPFLEASQAEKISFLIEHQNLMALWYLIIY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAGVWMVPLAIALHHRLQQAHPLLIQVTTAMGIIWATTILSSGMLLVNNIKIIADLQQQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEHHHC NPEQTLAVSTAISAVASGLGGAIELPGGVWVSLISIAALQTKRLPKALNYLGLLIGASGI CCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AMTVPAIAAVGTLFGIGMIGWFLWVGVVLVRTKNIEHRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA