| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is folE [H]
Identifier: 159896664
GI number: 159896664
Start: 162124
End: 162744
Strand: Direct
Name: folE [H]
Synonym: Haur_0131
Alternate gene names: 159896664
Gene position: 162124-162744 (Clockwise)
Preceding gene: 159896663
Following gene: 159896665
Centisome position: 2.55
GC content: 49.6
Gene sequence:
>621_bases ATGACGCTTATTTACTCTGGCAATGGACTCAATGGCAACTCAGCACCAGCAGTGCGCGAAGATATGGAAGCCGCCGTGCG AACCATTCTCGAAGGTCTCGGCGAGGATGTTGATCGTGAGGGCTTGCAACGCACCCCGCATCGGGTTGCCAAAATGTTTG GCGAGCTGACCGCTGGTTATCATACTGATCCGGTGGCGTTGATTAACGATGCCATTTTTACGGTCGAATATAACGAAATG GTCTTGGTGCGTGATATTGAATTTTCGTCGCTGTGCGAACATCATATGTTGCCATTTTGGGGCAAAGCCCACGTTGCCTA TGTGCCAAATGGCAAAGTGCTTGGGCTTTCGAAAATTCCACGGATTGTTGATATGTTTGCCAAACGTTTGCAAGTGCAAG AACGCCTAACCCGCGAAATCGCCGATTTTGTGGCGCAAACGATCGATGCAAGCGGCGTAGCAGTGGTGGTACAGGGTGCG CATATGTGCTCAATGATTCGTGGCGTTAAAAAGGCCAACGCTCGCATGGTCACGCAATCGTTGCAAGGTGTGTTTAAAAC CGATCCGCAAATTCGCGCTGAATTTATGGGTCATATCACGGCGAATTTTTCCGATGACTAA
Upstream 100 bases:
>100_bases GCCAATAATGTGTTTGATTACCCGCTCAGCCAGCATTGAGCAGCGGCAACCCTGAATCGTGGATGAGGTTCTGGAACTAC TAATGCAAAGGATGGATCAG
Downstream 100 bases:
>100_bases AACAATGGTGATTACTGGAGCTGGCCGTGGGATTGGCCGGGCAATTGCCTTGGCCTGTGCCGCCAACAACCAACTGGTTT TGCTCGCTCGCAGCGCAGCT
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTLIYSGNGLNGNSAPAVREDMEAAVRTILEGLGEDVDREGLQRTPHRVAKMFGELTAGYHTDPVALINDAIFTVEYNEM VLVRDIEFSSLCEHHMLPFWGKAHVAYVPNGKVLGLSKIPRIVDMFAKRLQVQERLTREIADFVAQTIDASGVAVVVQGA HMCSMIRGVKKANARMVTQSLQGVFKTDPQIRAEFMGHITANFSDD
Sequences:
>Translated_206_residues MTLIYSGNGLNGNSAPAVREDMEAAVRTILEGLGEDVDREGLQRTPHRVAKMFGELTAGYHTDPVALINDAIFTVEYNEM VLVRDIEFSSLCEHHMLPFWGKAHVAYVPNGKVLGLSKIPRIVDMFAKRLQVQERLTREIADFVAQTIDASGVAVVVQGA HMCSMIRGVKKANARMVTQSLQGVFKTDPQIRAEFMGHITANFSDD >Mature_205_residues TLIYSGNGLNGNSAPAVREDMEAAVRTILEGLGEDVDREGLQRTPHRVAKMFGELTAGYHTDPVALINDAIFTVEYNEMV LVRDIEFSSLCEHHMLPFWGKAHVAYVPNGKVLGLSKIPRIVDMFAKRLQVQERLTREIADFVAQTIDASGVAVVVQGAH MCSMIRGVKKANARMVTQSLQGVFKTDPQIRAEFMGHITANFSDD
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=181, Percent_Identity=46.9613259668508, Blast_Score=187, Evalue=4e-48, Organism=Homo sapiens, GI4503949, Length=181, Percent_Identity=46.9613259668508, Blast_Score=187, Evalue=4e-48, Organism=Homo sapiens, GI66932970, Length=149, Percent_Identity=44.9664429530201, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI66932972, Length=139, Percent_Identity=47.4820143884892, Blast_Score=144, Evalue=7e-35, Organism=Escherichia coli, GI1788476, Length=172, Percent_Identity=42.4418604651163, Blast_Score=123, Evalue=9e-30, Organism=Caenorhabditis elegans, GI17560486, Length=181, Percent_Identity=50.2762430939227, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6321706, Length=178, Percent_Identity=47.752808988764, Blast_Score=178, Evalue=6e-46, Organism=Drosophila melanogaster, GI24656782, Length=190, Percent_Identity=48.4210526315789, Blast_Score=182, Evalue=1e-46, Organism=Drosophila melanogaster, GI24656791, Length=190, Percent_Identity=48.4210526315789, Blast_Score=181, Evalue=2e-46, Organism=Drosophila melanogaster, GI24656796, Length=190, Percent_Identity=48.4210526315789, Blast_Score=181, Evalue=2e-46,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22761; Mature: 22629
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIYSGNGLNGNSAPAVREDMEAAVRTILEGLGEDVDREGLQRTPHRVAKMFGELTAGY CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCC HTDPVALINDAIFTVEYNEMVLVRDIEFSSLCEHHMLPFWGKAHVAYVPNGKVLGLSKIP CCCCHHHHCCEEEEEEECCEEEEECCCHHHHHHHCCCCCCCCCEEEECCCCCEECHHHHH RIVDMFAKRLQVQERLTREIADFVAQTIDASGVAVVVQGAHMCSMIRGVKKANARMVTQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH LQGVFKTDPQIRAEFMGHITANFSDD HHHHHCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLIYSGNGLNGNSAPAVREDMEAAVRTILEGLGEDVDREGLQRTPHRVAKMFGELTAGY EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCC HTDPVALINDAIFTVEYNEMVLVRDIEFSSLCEHHMLPFWGKAHVAYVPNGKVLGLSKIP CCCCHHHHCCEEEEEEECCEEEEECCCHHHHHHHCCCCCCCCCEEEECCCCCEECHHHHH RIVDMFAKRLQVQERLTREIADFVAQTIDASGVAVVVQGAHMCSMIRGVKKANARMVTQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH LQGVFKTDPQIRAEFMGHITANFSDD HHHHHCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA