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The map label for this gene is yrkO [H]

Identifier: 159896550

GI number: 159896550

Start: 20847

End: 21971

Strand: Reverse

Name: yrkO [H]

Synonym: Haur_0017

Alternate gene names: 159896550

Gene position: 21971-20847 (Counterclockwise)

Preceding gene: 159896551

Following gene: 159896545

Centisome position: 0.35

GC content: 48.89

Gene sequence:

>1125_bases
ATGGCAATTGTATCCCGTTCCAAGACCACAAATGTGGTCAAAGATTCGCAACGGATTGTTGGTTATGACGTAGCACGAGC
CTTGGCAATTTTAGCGATGGTGATTGTGCACTTCGCATTAACCTTCGTCAACATCGAACAACCCACAACCAATGGCCTGC
TTAGCTTGATTGTGCAGTTTTGCGAGGGTCGCGCGGCGGCCTTGTTTGTCGTTTTGGCAGGGGTTGGCTTGAGTTTGATC
GCCCGTACCCAAGCTAATCCTAGCTCTGAGGCAATTCAAGCCAAACGCTGGACGTTGACCAAACGTGGCTTATTTCTGCT
TGGCTTGGGCTTGCTCAACCTAACAATCTGGCCAGGCGATATTTTGCGGGTGTATGGGGTTTCTTTTTTGCTGATTGCTT
GGCTGTTTCAAAGCTCAAATCGGCGAATTTTGGGCTTGGCCTTAGGCTTTATGCTGGCCTTTGTTGGCCTGATGTTGCGC
TTCAATTTCAACCAAAACTGGGATTGGACAACCCTCGAATACACTAATTTATGGACGATCAAAGGCGGATTGCGCAATCT
ATTTTTTGATGGCTTCCGCAGTGTGTTCCCTTGGACTAGCCTGATTTTCTTTGGTATCTGGCTTGGCCGCCAAAACGTGC
AAGCTGCGCACGTGCGTTGGCGCTTATTTTGGATTGGGCTAAGTGTGGCGCTGGGCGTACAAATTGGATCGATTGGATTA
ACCTACGTTTTTAGCAACGTTTGGCCAATATTGGGTCAGGCAGATGCCGAATTGTTGTTTAGCACTGGCTCAATTCCACC
AATGCCCTTATTTTTGCTCTCGGCTGGTGGTGTGGCCTTGGCAATCATCATGAGTTGTGTACAGCTAAGTCAATTATTTG
GTGCTAGCCGCATCATTCATGGTTTGGCGGCAACTGGCCAATTGGCGCTGACCTGGTATATCGGCCATGTGGTAATTGGC
TTGGGTGTGTTGACCAGCCTTGGTTTTTATCAGAATCAGAGCCTTGCAACGTCGCTCTGGTTGGCCTTAGGCTTCTTTGG
ATTAGCGGTTGGCTGCTCGGTTTGGTGGAAAAAACGCTTCAATAATGGCCCATTGGAAACAGTGCTGCGTTGGGCCACCA
GCTAA

Upstream 100 bases:

>100_bases
ATTTAACCCTATATGCCGCTGGCCTCAAACACACGATTAAATATCTGTTGTCTGGCACTCGATTTTAATTGCGGGAATTC
ATGGCACTTGGAGAGGTATT

Downstream 100 bases:

>100_bases
AATCAACAACGCCCCCGATCTATTGCAAGATTGGGGGCGTTGCATCAACTTGGATTAGACTTGGCTATCGGGTTTGATCA
CAGGCTTATTGGTAACTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MAIVSRSKTTNVVKDSQRIVGYDVARALAILAMVIVHFALTFVNIEQPTTNGLLSLIVQFCEGRAAALFVVLAGVGLSLI
ARTQANPSSEAIQAKRWTLTKRGLFLLGLGLLNLTIWPGDILRVYGVSFLLIAWLFQSSNRRILGLALGFMLAFVGLMLR
FNFNQNWDWTTLEYTNLWTIKGGLRNLFFDGFRSVFPWTSLIFFGIWLGRQNVQAAHVRWRLFWIGLSVALGVQIGSIGL
TYVFSNVWPILGQADAELLFSTGSIPPMPLFLLSAGGVALAIIMSCVQLSQLFGASRIIHGLAATGQLALTWYIGHVVIG
LGVLTSLGFYQNQSLATSLWLALGFFGLAVGCSVWWKKRFNNGPLETVLRWATS

Sequences:

>Translated_374_residues
MAIVSRSKTTNVVKDSQRIVGYDVARALAILAMVIVHFALTFVNIEQPTTNGLLSLIVQFCEGRAAALFVVLAGVGLSLI
ARTQANPSSEAIQAKRWTLTKRGLFLLGLGLLNLTIWPGDILRVYGVSFLLIAWLFQSSNRRILGLALGFMLAFVGLMLR
FNFNQNWDWTTLEYTNLWTIKGGLRNLFFDGFRSVFPWTSLIFFGIWLGRQNVQAAHVRWRLFWIGLSVALGVQIGSIGL
TYVFSNVWPILGQADAELLFSTGSIPPMPLFLLSAGGVALAIIMSCVQLSQLFGASRIIHGLAATGQLALTWYIGHVVIG
LGVLTSLGFYQNQSLATSLWLALGFFGLAVGCSVWWKKRFNNGPLETVLRWATS
>Mature_373_residues
AIVSRSKTTNVVKDSQRIVGYDVARALAILAMVIVHFALTFVNIEQPTTNGLLSLIVQFCEGRAAALFVVLAGVGLSLIA
RTQANPSSEAIQAKRWTLTKRGLFLLGLGLLNLTIWPGDILRVYGVSFLLIAWLFQSSNRRILGLALGFMLAFVGLMLRF
NFNQNWDWTTLEYTNLWTIKGGLRNLFFDGFRSVFPWTSLIFFGIWLGRQNVQAAHVRWRLFWIGLSVALGVQIGSIGLT
YVFSNVWPILGQADAELLFSTGSIPPMPLFLLSAGGVALAIIMSCVQLSQLFGASRIIHGLAATGQLALTWYIGHVVIGL
GVLTSLGFYQNQSLATSLWLALGFFGLAVGCSVWWKKRFNNGPLETVLRWATS

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 41179; Mature: 41048

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVSRSKTTNVVKDSQRIVGYDVARALAILAMVIVHFALTFVNIEQPTTNGLLSLIVQF
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
CEGRAAALFVVLAGVGLSLIARTQANPSSEAIQAKRWTLTKRGLFLLGLGLLNLTIWPGD
HCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEECCHH
ILRVYGVSFLLIAWLFQSSNRRILGLALGFMLAFVGLMLRFNFNQNWDWTTLEYTNLWTI
HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEEE
KGGLRNLFFDGFRSVFPWTSLIFFGIWLGRQNVQAAHVRWRLFWIGLSVALGVQIGSIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEHHEEHHHHHHHHEECCHHH
TYVFSNVWPILGQADAELLFSTGSIPPMPLFLLSAGGVALAIIMSCVQLSQLFGASRIIH
HHHHHHHHHHCCCCCHHHEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLAATGQLALTWYIGHVVIGLGVLTSLGFYQNQSLATSLWLALGFFGLAVGCSVWWKKRF
HHHCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNGPLETVLRWATS
CCCCHHHHHHHHCC
>Mature Secondary Structure 
AIVSRSKTTNVVKDSQRIVGYDVARALAILAMVIVHFALTFVNIEQPTTNGLLSLIVQF
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
CEGRAAALFVVLAGVGLSLIARTQANPSSEAIQAKRWTLTKRGLFLLGLGLLNLTIWPGD
HCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEECCHH
ILRVYGVSFLLIAWLFQSSNRRILGLALGFMLAFVGLMLRFNFNQNWDWTTLEYTNLWTI
HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEEE
KGGLRNLFFDGFRSVFPWTSLIFFGIWLGRQNVQAAHVRWRLFWIGLSVALGVQIGSIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEHHEEHHHHHHHHEECCHHH
TYVFSNVWPILGQADAELLFSTGSIPPMPLFLLSAGGVALAIIMSCVQLSQLFGASRIIH
HHHHHHHHHHCCCCCHHHEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLAATGQLALTWYIGHVVIGLGVLTSLGFYQNQSLATSLWLALGFFGLAVGCSVWWKKRF
HHHCCCCHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNGPLETVLRWATS
CCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]