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The map label for this gene is tolB [H]

Identifier: 159896545

GI number: 159896545

Start: 12704

End: 14566

Strand: Reverse

Name: tolB [H]

Synonym: Haur_0012

Alternate gene names: 159896545

Gene position: 14566-12704 (Counterclockwise)

Preceding gene: 159896550

Following gene: 159896544

Centisome position: 0.23

GC content: 50.08

Gene sequence:

>1863_bases
ATGTCTCGATTGAAGGTTCGCTTAACTGGTCTACTTAGCGCTTTAGTTATGGTTGGTACGTTGTTCAATGGCCATGCCAA
CGCTGCTCCATGGGCCAATCGTTCAGCCTTTGTCTCACCCAAGTTCGAAGAAGTCTGGCGACGGTCGGATGATCCACGGG
TTCGTGATGGGCGCTCGTTGTATTGGGGTTTTGGGCCGTGGTTTGATTATAACGAATATTACCGTGAATCGCCAAATGGC
CTACGCCGCGTGCAATACTTCGATAAAGCTCGCATGGAAATCAATGGAATCAACGGTAACACCGATGTAACCAATGGTTT
GTTGGTGGTTGAATTAGTATCAGGCCAATTGAAAACTGGTGATAACGCCTATGATAACGCTATTCGCCCTGCTGCCGACC
GTGTGCCAGTTGCTGGCGATGGCTATCAAACTAACAGCAATTCGCCAACCTATGCCTCGTTCGCAGCGGTTTCAACCTAC
AACAACAACGGCTACCGTGATCCAGATCGCCGCGATCAATCAATTGCCGATGCGATCGATAAATCGGGCAATAAATCAAC
CCGCAACGATTTACGCGATGCCTACAAAGATCAAACCAAAATTGTCGTTTACAACGCGACAACTGGCCATAATATTCCGC
AAGTATTTTGGGATTTCTTGAATCGCACTGGCCCAATTATCGTCAATGGTCAGCGCACCAATGGCTCAATCGTCGATTGG
ACCAGCGCCATGGGCTTGCCAATTAGTGATCCCTACTGGGTCAAAGCCACAGTTGGCGGCGTGCAAAAAGATCTGTTGGT
GCAATTGTTTGAACGACGGATTTTGACCTATACCCCAACCAACGATGCCGCCTATCAAGTCGAAATGGGCAACGTCGGTC
AGCACTACTTCCAATGGCGCTACGGCCATTTGGGAACACCATGGAATAGCTCAGAACCGAGCTTGCCAATTGCTTTTGGT
TCAAAGCGCGATGGTGGAGCCGAATGGGATACCTACGCCATGAACGGCGATGGCAGCAGCCAATTGTTGTATGCTAGCAA
CGATAGCAAAGAAACCGTGCCATACTCATGGGTACGTTCGTGGGACCCAAGCAAAGTTAAATTGTTCGTCGATTCGCGCC
GTGGCAATGGCAGCAATCGCCAAATTTGGACGGTCGGCGCTGATGGTACGATGACCCGTGTGACCTACACCGACGGTACG
CCCACCCCTCCAGGTGTGCCTTACCAAGGCTATGTTGGCACTCCATCGAACGATTTCAATGCTTCAGTTTCGCCCGACGG
CAGCAAAATGGCCTTTGTCTCAGATCGTTCGGGTAAGCCGCAAATCTTTGTGAGCTATACCAACGGGGCCAGCCAAACTC
AAGTAACGCTTGATGATTGTGACCATCAAACCCCCAGCTGGAGTGCTGATGGTCGCTATCTCTACTGGGCCTCGAACTGT
GGCACGAACGCCAAATACAATATTTATCGCGCCGAACTGAACTGGTTGGCTGATCAACCAAGTAATGACTATCCATATCT
TTCATTGGAATTGCGCAACAAGGTCAATTTGACCAACAGCACAACCAGCGATAATGGCTTCCCACGGGTTTCGCCCGACG
GCACCAAAATCGTCTTTACTTCAAACCGTGATGGCAACAGCGAAGTCTATTTGATGAATGCTGATGGCACGAACCAAACC
CGTTTGACCAACAGCAGCGCCGAAGATGGTGCTCCTTCGTGGAAACTCGACGGGACCAAAATCGCTTTCGATAGCAACCG
CGATGGCAACTGGAATGTGTATGTGATGAACACCGATGGCACTGGTCAAGCACAATTGACCAACAACAGCGCTGATGATC
GCTGGAATGTTTGGGGCCAATAA

Upstream 100 bases:

>100_bases
CTGTACAATATGGTTTGCACCATGACCATTGTATAGTAAGACCCAGATGCCGTAGATGACGGATCGAGAAACTGGTTCTT
TTGCTTAGGAGGAAGTCGCA

Downstream 100 bases:

>100_bases
GCTCAAAACTCCCACTCCTCAGCCCCACGTCTAGTTGCCTAGACGTGGGGCTTTTTAGATTACTGCCGACGCATGCGCAG
AACCCTGGAAAACCGCTGGC

Product: WD40 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MSRLKVRLTGLLSALVMVGTLFNGHANAAPWANRSAFVSPKFEEVWRRSDDPRVRDGRSLYWGFGPWFDYNEYYRESPNG
LRRVQYFDKARMEINGINGNTDVTNGLLVVELVSGQLKTGDNAYDNAIRPAADRVPVAGDGYQTNSNSPTYASFAAVSTY
NNNGYRDPDRRDQSIADAIDKSGNKSTRNDLRDAYKDQTKIVVYNATTGHNIPQVFWDFLNRTGPIIVNGQRTNGSIVDW
TSAMGLPISDPYWVKATVGGVQKDLLVQLFERRILTYTPTNDAAYQVEMGNVGQHYFQWRYGHLGTPWNSSEPSLPIAFG
SKRDGGAEWDTYAMNGDGSSQLLYASNDSKETVPYSWVRSWDPSKVKLFVDSRRGNGSNRQIWTVGADGTMTRVTYTDGT
PTPPGVPYQGYVGTPSNDFNASVSPDGSKMAFVSDRSGKPQIFVSYTNGASQTQVTLDDCDHQTPSWSADGRYLYWASNC
GTNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTKIVFTSNRDGNSEVYLMNADGTNQT
RLTNSSAEDGAPSWKLDGTKIAFDSNRDGNWNVYVMNTDGTGQAQLTNNSADDRWNVWGQ

Sequences:

>Translated_620_residues
MSRLKVRLTGLLSALVMVGTLFNGHANAAPWANRSAFVSPKFEEVWRRSDDPRVRDGRSLYWGFGPWFDYNEYYRESPNG
LRRVQYFDKARMEINGINGNTDVTNGLLVVELVSGQLKTGDNAYDNAIRPAADRVPVAGDGYQTNSNSPTYASFAAVSTY
NNNGYRDPDRRDQSIADAIDKSGNKSTRNDLRDAYKDQTKIVVYNATTGHNIPQVFWDFLNRTGPIIVNGQRTNGSIVDW
TSAMGLPISDPYWVKATVGGVQKDLLVQLFERRILTYTPTNDAAYQVEMGNVGQHYFQWRYGHLGTPWNSSEPSLPIAFG
SKRDGGAEWDTYAMNGDGSSQLLYASNDSKETVPYSWVRSWDPSKVKLFVDSRRGNGSNRQIWTVGADGTMTRVTYTDGT
PTPPGVPYQGYVGTPSNDFNASVSPDGSKMAFVSDRSGKPQIFVSYTNGASQTQVTLDDCDHQTPSWSADGRYLYWASNC
GTNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTKIVFTSNRDGNSEVYLMNADGTNQT
RLTNSSAEDGAPSWKLDGTKIAFDSNRDGNWNVYVMNTDGTGQAQLTNNSADDRWNVWGQ
>Mature_619_residues
SRLKVRLTGLLSALVMVGTLFNGHANAAPWANRSAFVSPKFEEVWRRSDDPRVRDGRSLYWGFGPWFDYNEYYRESPNGL
RRVQYFDKARMEINGINGNTDVTNGLLVVELVSGQLKTGDNAYDNAIRPAADRVPVAGDGYQTNSNSPTYASFAAVSTYN
NNGYRDPDRRDQSIADAIDKSGNKSTRNDLRDAYKDQTKIVVYNATTGHNIPQVFWDFLNRTGPIIVNGQRTNGSIVDWT
SAMGLPISDPYWVKATVGGVQKDLLVQLFERRILTYTPTNDAAYQVEMGNVGQHYFQWRYGHLGTPWNSSEPSLPIAFGS
KRDGGAEWDTYAMNGDGSSQLLYASNDSKETVPYSWVRSWDPSKVKLFVDSRRGNGSNRQIWTVGADGTMTRVTYTDGTP
TPPGVPYQGYVGTPSNDFNASVSPDGSKMAFVSDRSGKPQIFVSYTNGASQTQVTLDDCDHQTPSWSADGRYLYWASNCG
TNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTKIVFTSNRDGNSEVYLMNADGTNQTR
LTNSSAEDGAPSWKLDGTKIAFDSNRDGNWNVYVMNTDGTGQAQLTNNSADDRWNVWGQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 68948; Mature: 68817

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLKVRLTGLLSALVMVGTLFNGHANAAPWANRSAFVSPKFEEVWRRSDDPRVRDGRSL
CCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCCCEE
YWGFGPWFDYNEYYRESPNGLRRVQYFDKARMEINGINGNTDVTNGLLVVELVSGQLKTG
EEECCCCCCCHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCC
DNAYDNAIRPAADRVPVAGDGYQTNSNSPTYASFAAVSTYNNNGYRDPDRRDQSIADAID
CCHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHH
KSGNKSTRNDLRDAYKDQTKIVVYNATTGHNIPQVFWDFLNRTGPIIVNGQRTNGSIVDW
CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEE
TSAMGLPISDPYWVKATVGGVQKDLLVQLFERRILTYTPTNDAAYQVEMGNVGQHYFQWR
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCHHEEE
YGHLGTPWNSSEPSLPIAFGSKRDGGAEWDTYAMNGDGSSQLLYASNDSKETVPYSWVRS
ECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHC
WDPSKVKLFVDSRRGNGSNRQIWTVGADGTMTRVTYTDGTPTPPGVPYQGYVGTPSNDFN
CCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCC
ASVSPDGSKMAFVSDRSGKPQIFVSYTNGASQTQVTLDDCDHQTPSWSADGRYLYWASNC
EEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCCEEEEECCC
GTNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTKIVFT
CCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCCCEECCCCCEEEEE
SNRDGNSEVYLMNADGTNQTRLTNSSAEDGAPSWKLDGTKIAFDSNRDGNWNVYVMNTDG
CCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEECCEEEEEECCCCCCEEEEEEECCC
TGQAQLTNNSADDRWNVWGQ
CCEEEEECCCCCCCEECCCC
>Mature Secondary Structure 
SRLKVRLTGLLSALVMVGTLFNGHANAAPWANRSAFVSPKFEEVWRRSDDPRVRDGRSL
CCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCCCCCEE
YWGFGPWFDYNEYYRESPNGLRRVQYFDKARMEINGINGNTDVTNGLLVVELVSGQLKTG
EEECCCCCCCHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCC
DNAYDNAIRPAADRVPVAGDGYQTNSNSPTYASFAAVSTYNNNGYRDPDRRDQSIADAID
CCHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHH
KSGNKSTRNDLRDAYKDQTKIVVYNATTGHNIPQVFWDFLNRTGPIIVNGQRTNGSIVDW
CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCEEEE
TSAMGLPISDPYWVKATVGGVQKDLLVQLFERRILTYTPTNDAAYQVEMGNVGQHYFQWR
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCHHEEE
YGHLGTPWNSSEPSLPIAFGSKRDGGAEWDTYAMNGDGSSQLLYASNDSKETVPYSWVRS
ECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHC
WDPSKVKLFVDSRRGNGSNRQIWTVGADGTMTRVTYTDGTPTPPGVPYQGYVGTPSNDFN
CCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCC
ASVSPDGSKMAFVSDRSGKPQIFVSYTNGASQTQVTLDDCDHQTPSWSADGRYLYWASNC
EEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEHHCCCCCCCCCCCCCCEEEEECCC
GTNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTKIVFT
CCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCCCEECCCCCEEEEE
SNRDGNSEVYLMNADGTNQTRLTNSSAEDGAPSWKLDGTKIAFDSNRDGNWNVYVMNTDG
CCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEECCEEEEEECCCCCCEEEEEEECCC
TGQAQLTNNSADDRWNVWGQ
CCEEEEECCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA