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The map label for this gene is 159041804

Identifier: 159041804

GI number: 159041804

Start: 1310549

End: 1310917

Strand: Reverse

Name: 159041804

Synonym: Cmaq_1239

Alternate gene names: NA

Gene position: 1310917-1310549 (Counterclockwise)

Preceding gene: 159041805

Following gene: 159041801

Centisome position: 63.1

GC content: 53.39

Gene sequence:

>369_bases
ATGTACGAAACATTTATTAAGGGGGCTATTGGTGGATTAACGGCGATACGGACGTCAACAGGTCCCGGAATGAATAGGGG
AAGGCCTAGACGAAGAGGCCGTGGTCCAAAACCAGTGAAAGTCGGTGACGTTGTGGAGGTGGAGGTAACCGAAATATCCA
AGAGGGGTGATGGTGTCGCGAAGATAAGAGGCTTCATAATCTTCATACCGAACACCAAGCCCGGTGAGAAGGTTAGAGTT
AAGATAACGAGGGTTGGTCCATCCTTCGCGGTTGCCGAACTAGCCCAAGAGGCGGGGCAGGGAGCAGCCACTGGTCAGGA
GACCCAGCCTGAGGAGGCCTCCCAAGGAGAGGAGTTTGAGGAGGAGTAA

Upstream 100 bases:

>100_bases
CAGGAAGATAATTAAAATGATACACGGTTAATATTCATTAGGCTTGGCATATACCTAAAATTAAGCATTTTAATCACCCA
GGTAATGCCAGGGGTACCTT

Downstream 100 bases:

>100_bases
TTAATCACCTAATGCTTAAATCACGTTAAATTAATTTTGCAGACGCATTAAGTTTAAGCCAAATCCTGCTTCAATGATAA
GTAAGCTTATCTGCACATGA

Product: deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MYETFIKGAIGGLTAIRTSTGPGMNRGRPRRRGRGPKPVKVGDVVEVEVTEISKRGDGVAKIRGFIIFIPNTKPGEKVRV
KITRVGPSFAVAELAQEAGQGAATGQETQPEEASQGEEFEEE

Sequences:

>Translated_122_residues
MYETFIKGAIGGLTAIRTSTGPGMNRGRPRRRGRGPKPVKVGDVVEVEVTEISKRGDGVAKIRGFIIFIPNTKPGEKVRV
KITRVGPSFAVAELAQEAGQGAATGQETQPEEASQGEEFEEE
>Mature_122_residues
MYETFIKGAIGGLTAIRTSTGPGMNRGRPRRRGRGPKPVKVGDVVEVEVTEISKRGDGVAKIRGFIIFIPNTKPGEKVRV
KITRVGPSFAVAELAQEAGQGAATGQETQPEEASQGEEFEEE

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13067; Mature: 13067

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYETFIKGAIGGLTAIRTSTGPGMNRGRPRRRGRGPKPVKVGDVVEVEVTEISKRGDGVA
CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCEE
KIRGFIIFIPNTKPGEKVRVKITRVGPSFAVAELAQEAGQGAATGQETQPEEASQGEEFE
EEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
EE
CC
>Mature Secondary Structure
MYETFIKGAIGGLTAIRTSTGPGMNRGRPRRRGRGPKPVKVGDVVEVEVTEISKRGDGVA
CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCEE
KIRGFIIFIPNTKPGEKVRVKITRVGPSFAVAELAQEAGQGAATGQETQPEEASQGEEFE
EEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA