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The map label for this gene is yigC [C]

Identifier: 159041801

GI number: 159041801

Start: 1306816

End: 1308252

Strand: Reverse

Name: yigC [C]

Synonym: Cmaq_1236

Alternate gene names: 159041801

Gene position: 1308252-1306816 (Counterclockwise)

Preceding gene: 159041804

Following gene: 159041799

Centisome position: 62.97

GC content: 48.02

Gene sequence:

>1437_bases
ATGGCCTTCAATGACCTTAGAGGATATTTAAGCAAACTGGAGGAGGAGGGGGAGTTGATTAGGGTTAATGAACCAATCAG
CGTGGAGTTGGAGTTACCGGCATTACTAAGGGGATTAATGTATAGGAATGGGCCAGCTGTTATCATTGAGAAAACTAAGG
AAGATACCCTACCAGCCGTAGGTAACCTATTCGGTAAGTGGAGTAGGGTTTTAACGGCTCTTAACAATGTTGAGCCAGAG
AAGGCTGCCGAGAGGATTACTGAATTAATTAACCTTAAGCCGCCAACAGGCTTAATAGATGCCATTAAGGCCCTCGGTGA
GTTAAGGAGTGTTTCAAGGTACTTCCCAAGGCTGGTTAATAAGGCTCCAGTTAAGGAGAAGGAGTGGAGGAGCATTGACT
TATTTAAACTACCGGCTATTAAGCAGTGGCCTAAGGAGCCTGGTAGATTCCTAACCTTCGCAGTATCATTCATTAAGCAC
AATGACGTAACCAACTTCGGCTACTATAGGCTTCAGGTAATTGATAGGGATAGGTTCATTATGCATTGGATGCCGTGGAG
GAGGAGCGCCCAATACGCCGATATGGGTGAGGTGGAGGTGGCTGTTGTACTGGGTCCTGACCCAGTAACCATGCTTATGG
CCGGTACACCAGTACCACATCCCCTTGATAAACTACTGGTTACTGGGGTTATTAGGGGTGAGGGGGTTGAGTTAACGAGG
GGCTCAACCATCAGTATTGAGTACCCGGCTAACGCTGAATTGGTTATTGAGGGTAAGTTAACCGGGGAGTACGTTAAGGA
GGGGCCCTTTGGGGATCACGTGGGCTACTACTCAATAGTTAAGGAGTATCCTGTGGTTAAGGTAACAGCCATGTACTCCA
GGGAGGACCCCTTAATACCAGTCACAGTCACAGGTAAGCCTGTGCTTGAGGATGGTAACATAATTAAGTTCGGCGTCGAG
GCAATGAAACCACTGTTAAAGCAACTAATGCCGGAGGTGGCTGACATCTACATGCCCCCTGAGGGCATTGGGTACTGGAC
TATAGTGTCAATAAGGAAGAGGTACCCTGGACAGGCTAGGAGGGTTATGGCAACCCTCTGGGGCCTGTTACCGGTCTTCA
ATAAGGTGGTGATTGTTGTTGACCATGACGTGGACGTTAAAAACATGGGTGAAGTCACATACGCAATAGCAGCCAACCTA
AACCCGCAGAGGGACGTGGTAATAATGCCAGAATACCCAACCGAGGAACTTGACCCATCAACCCCAGTGCCAGGCCTGGG
GAGTAAGCTGGGGCTTGATGCAACTAGGAAACTACCAGGTGAGTATAATGGCCAAGAATACCCAGAGGAGGCTCAAGCAC
CCCCTGAGGTTGAAAACTCTATGATGCAGATTATTGAGAAAATAATGACCAATTACCCTAAACGCAGCAGTAGGTAA

Upstream 100 bases:

>100_bases
GCTTTAATCCACTCAACCCCATTGGGAAGCAGCCTAAGTGGCTTATTTTAAACGTTGACTCCAGTAACCTACTTAAACGC
ATTAATGCAGTGTAGTATTA

Downstream 100 bases:

>100_bases
GATCACCTTGAGTAGTAGGCATTGTTTTCATTGGGTAGTGTTTATAAAGGCTTGCTCATTGTCTTCAGTGAGCCGGGTCG
TCTAGCGGCCAAGGATGGTG

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MAFNDLRGYLSKLEEEGELIRVNEPISVELELPALLRGLMYRNGPAVIIEKTKEDTLPAVGNLFGKWSRVLTALNNVEPE
KAAERITELINLKPPTGLIDAIKALGELRSVSRYFPRLVNKAPVKEKEWRSIDLFKLPAIKQWPKEPGRFLTFAVSFIKH
NDVTNFGYYRLQVIDRDRFIMHWMPWRRSAQYADMGEVEVAVVLGPDPVTMLMAGTPVPHPLDKLLVTGVIRGEGVELTR
GSTISIEYPANAELVIEGKLTGEYVKEGPFGDHVGYYSIVKEYPVVKVTAMYSREDPLIPVTVTGKPVLEDGNIIKFGVE
AMKPLLKQLMPEVADIYMPPEGIGYWTIVSIRKRYPGQARRVMATLWGLLPVFNKVVIVVDHDVDVKNMGEVTYAIAANL
NPQRDVVIMPEYPTEELDPSTPVPGLGSKLGLDATRKLPGEYNGQEYPEEAQAPPEVENSMMQIIEKIMTNYPKRSSR

Sequences:

>Translated_478_residues
MAFNDLRGYLSKLEEEGELIRVNEPISVELELPALLRGLMYRNGPAVIIEKTKEDTLPAVGNLFGKWSRVLTALNNVEPE
KAAERITELINLKPPTGLIDAIKALGELRSVSRYFPRLVNKAPVKEKEWRSIDLFKLPAIKQWPKEPGRFLTFAVSFIKH
NDVTNFGYYRLQVIDRDRFIMHWMPWRRSAQYADMGEVEVAVVLGPDPVTMLMAGTPVPHPLDKLLVTGVIRGEGVELTR
GSTISIEYPANAELVIEGKLTGEYVKEGPFGDHVGYYSIVKEYPVVKVTAMYSREDPLIPVTVTGKPVLEDGNIIKFGVE
AMKPLLKQLMPEVADIYMPPEGIGYWTIVSIRKRYPGQARRVMATLWGLLPVFNKVVIVVDHDVDVKNMGEVTYAIAANL
NPQRDVVIMPEYPTEELDPSTPVPGLGSKLGLDATRKLPGEYNGQEYPEEAQAPPEVENSMMQIIEKIMTNYPKRSSR
>Mature_477_residues
AFNDLRGYLSKLEEEGELIRVNEPISVELELPALLRGLMYRNGPAVIIEKTKEDTLPAVGNLFGKWSRVLTALNNVEPEK
AAERITELINLKPPTGLIDAIKALGELRSVSRYFPRLVNKAPVKEKEWRSIDLFKLPAIKQWPKEPGRFLTFAVSFIKHN
DVTNFGYYRLQVIDRDRFIMHWMPWRRSAQYADMGEVEVAVVLGPDPVTMLMAGTPVPHPLDKLLVTGVIRGEGVELTRG
STISIEYPANAELVIEGKLTGEYVKEGPFGDHVGYYSIVKEYPVVKVTAMYSREDPLIPVTVTGKPVLEDGNIIKFGVEA
MKPLLKQLMPEVADIYMPPEGIGYWTIVSIRKRYPGQARRVMATLWGLLPVFNKVVIVVDHDVDVKNMGEVTYAIAANLN
PQRDVVIMPEYPTEELDPSTPVPGLGSKLGLDATRKLPGEYNGQEYPEEAQAPPEVENSMMQIIEKIMTNYPKRSSR

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=460, Percent_Identity=36.304347826087, Blast_Score=286, Evalue=3e-78,
Organism=Saccharomyces cerevisiae, GI6320748, Length=449, Percent_Identity=24.2761692650334, Blast_Score=91, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 53697; Mature: 53566

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNDLRGYLSKLEEEGELIRVNEPISVELELPALLRGLMYRNGPAVIIEKTKEDTLPAV
CCCHHHHHHHHHHHCCCCEEEECCCEEEEEECHHHHHHHHHCCCCEEEEECCCCCCCHHH
GNLFGKWSRVLTALNNVEPEKAAERITELINLKPPTGLIDAIKALGELRSVSRYFPRLVN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KAPVKEKEWRSIDLFKLPAIKQWPKEPGRFLTFAVSFIKHNDVTNFGYYRLQVIDRDRFI
CCCCCCCCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEE
MHWMPWRRSAQYADMGEVEVAVVLGPDPVTMLMAGTPVPHPLDKLLVTGVIRGEGVELTR
EEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHEECCCCEEEEC
GSTISIEYPANAELVIEGKLTGEYVKEGPFGDHVGYYSIVKEYPVVKVTAMYSREDPLIP
CCEEEEEECCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCEEE
VTVTGKPVLEDGNIIKFGVEAMKPLLKQLMPEVADIYMPPEGIGYWTIVSIRKRYPGQAR
EEECCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCHHH
RVMATLWGLLPVFNKVVIVVDHDVDVKNMGEVTYAIAANLNPQRDVVIMPEYPTEELDPS
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
TPVPGLGSKLGLDATRKLPGEYNGQEYPEEAQAPPEVENSMMQIIEKIMTNYPKRSSR
CCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AFNDLRGYLSKLEEEGELIRVNEPISVELELPALLRGLMYRNGPAVIIEKTKEDTLPAV
CCHHHHHHHHHHHCCCCEEEECCCEEEEEECHHHHHHHHHCCCCEEEEECCCCCCCHHH
GNLFGKWSRVLTALNNVEPEKAAERITELINLKPPTGLIDAIKALGELRSVSRYFPRLVN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KAPVKEKEWRSIDLFKLPAIKQWPKEPGRFLTFAVSFIKHNDVTNFGYYRLQVIDRDRFI
CCCCCCCCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEE
MHWMPWRRSAQYADMGEVEVAVVLGPDPVTMLMAGTPVPHPLDKLLVTGVIRGEGVELTR
EEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHEECCCCEEEEC
GSTISIEYPANAELVIEGKLTGEYVKEGPFGDHVGYYSIVKEYPVVKVTAMYSREDPLIP
CCEEEEEECCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCEEE
VTVTGKPVLEDGNIIKFGVEAMKPLLKQLMPEVADIYMPPEGIGYWTIVSIRKRYPGQAR
EEECCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCHHH
RVMATLWGLLPVFNKVVIVVDHDVDVKNMGEVTYAIAANLNPQRDVVIMPEYPTEELDPS
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCC
TPVPGLGSKLGLDATRKLPGEYNGQEYPEEAQAPPEVENSMMQIIEKIMTNYPKRSSR
CCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]