| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041047
Identifier: 159041047
GI number: 159041047
Start: 503032
End: 504303
Strand: Reverse
Name: 159041047
Synonym: Cmaq_0464
Alternate gene names: NA
Gene position: 504303-503032 (Counterclockwise)
Preceding gene: 159041051
Following gene: 159041046
Centisome position: 24.27
GC content: 43.24
Gene sequence:
>1272_bases ATGCCGGCAATAGGTAAGTGGGTTACGTTCTTATTAGCAATAATGATCGCAGCCAGTCTCCTAGTTACATATGCCCAGCA AGTGGTGCCGCTGGTTCCAGCCTTTAACACTACGTCAAACGTAGTGGTTATTGGCAATATGTCTAGTCAATACGTCTCAA AGCTTCTTGGTTACGCCTTATTCTTTACTAATCTTTGGGACATGGGCTCAGGTACCTCGGGTTCAACTATCTTAATGTAT AATGCTGCTGAGGGAGTGGCATATTATATACGGAATTACACCTTCATTAAGCCTACATATTCATACGATGTCACTCTTGG TTACCCTGCAATATTCTATGGTCATTCACAGTGGGGTGGCTTATATCCTAAGATGAGTCCATTACTAATGCTTCCAGCTC AAGTCATATCGCTTCCAGGTATTTGGGCTTACGTGAACTACAGTACGGTTAAGTTCACTCCCGGTAACCTGCAGTTTGAC TTATCACTACAGGTTTGGCTGGGGGCAACGCCTAATGAGACCAGTGGAGCCCAGCCAGGTGATTTAGAGGTGATAATATA CTACTATACGCATAATATGGCCCCGGGTGGTTCAAATATGGGTACTATAACTGTGCCTACGTTTGTTAACGGTAGTATTG TTGATGAGAGTTGGCAGGTTTGGGTTTACTACGGTGGATCAAGCATGTGGACTATAGCTTGGTTTGTACCAAGTATTAAT CAGCCAAGCGGCTACGTTGGATTAAACATAACTGGTATGCTCTACGACTTATTCAATATACTAGTTACCAATTGGCCGCT GCAGTGGAACTTCACTGGGTTACTGAACTACTACTTATTCCAGCTTGGTAACGACTTCGGTACATCAAGTCAATTAAGTA ACGTCTTCGAGAACATAACAGTATATAAGTATTACCTTGAGTTAACTAAGCCATTAATACCGATAATCACGGTAACCAAC ACAACAACAACCACAGTCACCACCACGGCAACAACCTACGTAACATCAACAGTAACCAGCACAACCACTACCACTGTAAC CTCAACCACAACCTCAGTTAGCACTACCACTGTTACTTCACCTGTGACTAGTACGACAACGTTAACAACCACATCACTCT TAACCACCACTAGTACCGCAACATTGGTAAGCACTTTAACCAGTACCTTAACAGTTACTAAGGAGGTTATTGGGACAAGC GTAATAGTGGGCATAGTAATCATAGTAATCGTAATAGCAGTCATTGCGGCGCTGCTGGTTAGGAGGAGGTAG
Upstream 100 bases:
>100_bases GTATGTAAGATGCTTATATACTTGAATTAAAATACTATCGCTAATTTTAGTGTTAAGTAAGCTATAGGGTAAACTTAAAA AACCTTAAGCCACATAACAT
Downstream 100 bases:
>100_bases GTTAACGGCAAGGTATTAAACAATATTTAAATTATTCCCTATGAATTTCCTAAAAGGCTTCATGCTAATTAAGTCTAGTA ATCGTAAACACTGCATAATG
Product: solute binding protein-like protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Endoglucanase; Cellulase; Endo-Beta 1 4-Glucanase; Endo-Beta1 4-Glucanase
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MPAIGKWVTFLLAIMIAASLLVTYAQQVVPLVPAFNTTSNVVVIGNMSSQYVSKLLGYALFFTNLWDMGSGTSGSTILMY NAAEGVAYYIRNYTFIKPTYSYDVTLGYPAIFYGHSQWGGLYPKMSPLLMLPAQVISLPGIWAYVNYSTVKFTPGNLQFD LSLQVWLGATPNETSGAQPGDLEVIIYYYTHNMAPGGSNMGTITVPTFVNGSIVDESWQVWVYYGGSSMWTIAWFVPSIN QPSGYVGLNITGMLYDLFNILVTNWPLQWNFTGLLNYYLFQLGNDFGTSSQLSNVFENITVYKYYLELTKPLIPIITVTN TTTTTVTTTATTYVTSTVTSTTTTTVTSTTTSVSTTTVTSPVTSTTTLTTTSLLTTTSTATLVSTLTSTLTVTKEVIGTS VIVGIVIIVIVIAVIAALLVRRR
Sequences:
>Translated_423_residues MPAIGKWVTFLLAIMIAASLLVTYAQQVVPLVPAFNTTSNVVVIGNMSSQYVSKLLGYALFFTNLWDMGSGTSGSTILMY NAAEGVAYYIRNYTFIKPTYSYDVTLGYPAIFYGHSQWGGLYPKMSPLLMLPAQVISLPGIWAYVNYSTVKFTPGNLQFD LSLQVWLGATPNETSGAQPGDLEVIIYYYTHNMAPGGSNMGTITVPTFVNGSIVDESWQVWVYYGGSSMWTIAWFVPSIN QPSGYVGLNITGMLYDLFNILVTNWPLQWNFTGLLNYYLFQLGNDFGTSSQLSNVFENITVYKYYLELTKPLIPIITVTN TTTTTVTTTATTYVTSTVTSTTTTTVTSTTTSVSTTTVTSPVTSTTTLTTTSLLTTTSTATLVSTLTSTLTVTKEVIGTS VIVGIVIIVIVIAVIAALLVRRR >Mature_422_residues PAIGKWVTFLLAIMIAASLLVTYAQQVVPLVPAFNTTSNVVVIGNMSSQYVSKLLGYALFFTNLWDMGSGTSGSTILMYN AAEGVAYYIRNYTFIKPTYSYDVTLGYPAIFYGHSQWGGLYPKMSPLLMLPAQVISLPGIWAYVNYSTVKFTPGNLQFDL SLQVWLGATPNETSGAQPGDLEVIIYYYTHNMAPGGSNMGTITVPTFVNGSIVDESWQVWVYYGGSSMWTIAWFVPSINQ PSGYVGLNITGMLYDLFNILVTNWPLQWNFTGLLNYYLFQLGNDFGTSSQLSNVFENITVYKYYLELTKPLIPIITVTNT TTTTVTTTATTYVTSTVTSTTTTTVTSTTTSVSTTTVTSPVTSTTTLTTTSLLTTTSTATLVSTLTSTLTVTKEVIGTSV IVGIVIIVIVIAVIAALLVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46060; Mature: 45929
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIGKWVTFLLAIMIAASLLVTYAQQVVPLVPAFNTTSNVVVIGNMSSQYVSKLLGYAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHH FFTNLWDMGSGTSGSTILMYNAAEGVAYYIRNYTFIKPTYSYDVTLGYPAIFYGHSQWGG HHHHHHCCCCCCCCCEEEEEECCCCCEEEECCEEEECCCEEEEEEECCCEEEECCCCCCC LYPKMSPLLMLPAQVISLPGIWAYVNYSTVKFTPGNLQFDLSLQVWLGATPNETSGAQPG CCCCCCCHHCCCHHHHCCCCEEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCC DLEVIIYYYTHNMAPGGSNMGTITVPTFVNGSIVDESWQVWVYYGGSSMWTIAWFVPSIN CEEEEEEEEECCCCCCCCCCCEEEECEEECCCEECCCEEEEEEECCCCEEEEEEEECCCC QPSGYVGLNITGMLYDLFNILVTNWPLQWNFTGLLNYYLFQLGNDFGTSSQLSNVFENIT CCCCEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VYKYYLELTKPLIPIITVTNTTTTTVTTTATTYVTSTVTSTTTTTVTSTTTSVSTTTVTS HEEEEEHHHCCCEEEEEEECCCEEEEEEEEEEEEEEEEECCEEEEEEEEECEEEEEEEEC PVTSTTTLTTTSLLTTTSTATLVSTLTSTLTVTKEVIGTSVIVGIVIIVIVIAVIAALLV CCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRR CCC >Mature Secondary Structure PAIGKWVTFLLAIMIAASLLVTYAQQVVPLVPAFNTTSNVVVIGNMSSQYVSKLLGYAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHH FFTNLWDMGSGTSGSTILMYNAAEGVAYYIRNYTFIKPTYSYDVTLGYPAIFYGHSQWGG HHHHHHCCCCCCCCCEEEEEECCCCCEEEECCEEEECCCEEEEEEECCCEEEECCCCCCC LYPKMSPLLMLPAQVISLPGIWAYVNYSTVKFTPGNLQFDLSLQVWLGATPNETSGAQPG CCCCCCCHHCCCHHHHCCCCEEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCC DLEVIIYYYTHNMAPGGSNMGTITVPTFVNGSIVDESWQVWVYYGGSSMWTIAWFVPSIN CEEEEEEEEECCCCCCCCCCCEEEECEEECCCEECCCEEEEEEECCCCEEEEEEEECCCC QPSGYVGLNITGMLYDLFNILVTNWPLQWNFTGLLNYYLFQLGNDFGTSSQLSNVFENIT CCCCEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VYKYYLELTKPLIPIITVTNTTTTTVTTTATTYVTSTVTSTTTTTVTSTTTSVSTTTVTS HEEEEEHHHCCCEEEEEEECCCEEEEEEEEEEEEEEEEECCEEEEEEEEECEEEEEEEEC PVTSTTTLTTTSLLTTTSTATLVSTLTSTLTVTKEVIGTSVIVGIVIIVIVIAVIAALLV CCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA