| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is 159041051
Identifier: 159041051
GI number: 159041051
Start: 506916
End: 507950
Strand: Reverse
Name: 159041051
Synonym: Cmaq_0468
Alternate gene names: NA
Gene position: 507950-506916 (Counterclockwise)
Preceding gene: 159041052
Following gene: 159041047
Centisome position: 24.45
GC content: 47.44
Gene sequence:
>1035_bases ATGGTTAGTGAAACACTTAGGCCTTCCCCTGCAATAGAGGGTGGTGTAGACTCCCTATTCTACTGTTGGAGGAGGGTTCC ATCCACTAGGCCTGGACTTGAGGAGGAGTTTCAGGCTTGTAAAGCCAGTGAGTATTGGAGGGTTAATTATGATGAGATTA AGTACACTGACTTCTCGCAGTCCGACTACTTCAAGCCTAAGGGTCTTCAAACGGTCTCCATGAGGTCCAGGGTCACGTTC ACTTACGGTCACTTCACGCTAATGACCAAGTTACCTAGGGTTGAGGGTGGGCCAATGCTCTGGTTCGGCTTCGAGACCGA TGACTTATTCGCTGGGGGTGCTGTGCATTACTGCTGGTTTTCAGGTAAAGGTGCATTAACTGCGAATATTGGTGGGATAA CTAAGCTTGTTTCAATGGACTTAACCAGGTTTCTACCCCAGGATGTTTCAGAGAAGTATCACTGGTTCAGTATAGTGTAC AGGAGGGGTTTGGCTTTATGGTACATTGACGGTAAACTCAGGGCATTAGCCTCAATAAGTAATGGTGATGTTAAGGATGG TGGGGTAGTTTACGATAAGCCACCCTACATTGCATCATGGATCACTGACGCACCCTCACCTCAATTGGCAGTACTCCTTG ATATTGATGCTGCACCGCAGGTTGAGTTTCATTGGCAGGGCCTAAACCCATGGGGTTTAAGGGTATCCAACGGTGATGCC GAGGAACCCGTGAGGATTAGGCTCTATAGGGATGGTTCAGAGGAGACTTGGGCTGGTTTAACCGTTAACCCTGGGGTTGA ATTACTCTCTCAGCCGTTACCTGGTATTGGCGAGAAGACACTTATCATGAATGCACCAGGTGGTGAATTAACCATAGAGT ACTTCACTGAGGGTAATTGGGTTGAGGCCAGGAGTCAAGCATTGAGTAGTGGAACCACTGTATTAGGTATTAATGAGTAC ACCGCCTTAATTAGGTTTAGGTATAGGGCTAGGGAACCTGGTTCAATAAGGGCAGCCTCATTAACCCTGGTTTAA
Upstream 100 bases:
>100_bases AGATGATTAGCCTTAAGTAATCATGTAGATGCAGCCTCACCGTAGGTTGAACCAAGGCTATTTAACTCAATACTTAATAA GCACCAGTGAAGGATAATGC
Downstream 100 bases:
>100_bases TCCACCGCCGCCACTTTAGCCTTAGCCCTATGGTTAAAGTAGGCGTAGACTGTTACCACTATGAAGTCTGCTATAATCAT TGAGTGCATTATAGTGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVSETLRPSPAIEGGVDSLFYCWRRVPSTRPGLEEEFQACKASEYWRVNYDEIKYTDFSQSDYFKPKGLQTVSMRSRVTF TYGHFTLMTKLPRVEGGPMLWFGFETDDLFAGGAVHYCWFSGKGALTANIGGITKLVSMDLTRFLPQDVSEKYHWFSIVY RRGLALWYIDGKLRALASISNGDVKDGGVVYDKPPYIASWITDAPSPQLAVLLDIDAAPQVEFHWQGLNPWGLRVSNGDA EEPVRIRLYRDGSEETWAGLTVNPGVELLSQPLPGIGEKTLIMNAPGGELTIEYFTEGNWVEARSQALSSGTTVLGINEY TALIRFRYRAREPGSIRAASLTLV
Sequences:
>Translated_344_residues MVSETLRPSPAIEGGVDSLFYCWRRVPSTRPGLEEEFQACKASEYWRVNYDEIKYTDFSQSDYFKPKGLQTVSMRSRVTF TYGHFTLMTKLPRVEGGPMLWFGFETDDLFAGGAVHYCWFSGKGALTANIGGITKLVSMDLTRFLPQDVSEKYHWFSIVY RRGLALWYIDGKLRALASISNGDVKDGGVVYDKPPYIASWITDAPSPQLAVLLDIDAAPQVEFHWQGLNPWGLRVSNGDA EEPVRIRLYRDGSEETWAGLTVNPGVELLSQPLPGIGEKTLIMNAPGGELTIEYFTEGNWVEARSQALSSGTTVLGINEY TALIRFRYRAREPGSIRAASLTLV >Mature_344_residues MVSETLRPSPAIEGGVDSLFYCWRRVPSTRPGLEEEFQACKASEYWRVNYDEIKYTDFSQSDYFKPKGLQTVSMRSRVTF TYGHFTLMTKLPRVEGGPMLWFGFETDDLFAGGAVHYCWFSGKGALTANIGGITKLVSMDLTRFLPQDVSEKYHWFSIVY RRGLALWYIDGKLRALASISNGDVKDGGVVYDKPPYIASWITDAPSPQLAVLLDIDAAPQVEFHWQGLNPWGLRVSNGDA EEPVRIRLYRDGSEETWAGLTVNPGVELLSQPLPGIGEKTLIMNAPGGELTIEYFTEGNWVEARSQALSSGTTVLGINEY TALIRFRYRAREPGSIRAASLTLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38481; Mature: 38481
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSETLRPSPAIEGGVDSLFYCWRRVPSTRPGLEEEFQACKASEYWRVNYDEIKYTDFSQ CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCEEEECCCC SDYFKPKGLQTVSMRSRVTFTYGHFTLMTKLPRVEGGPMLWFGFETDDLFAGGAVHYCWF CCCCCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCEECCCEEEEEEE SGKGALTANIGGITKLVSMDLTRFLPQDVSEKYHWFSIVYRRGLALWYIDGKLRALASIS CCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECC NGDVKDGGVVYDKPPYIASWITDAPSPQLAVLLDIDAAPQVEFHWQGLNPWGLRVSNGDA CCCCCCCCEEEECCCCCEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCC EEPVRIRLYRDGSEETWAGLTVNPGVELLSQPLPGIGEKTLIMNAPGGELTIEYFTEGNW CCCEEEEEEECCCCCEEECEEECCCHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCC VEARSQALSSGTTVLGINEYTALIRFRYRAREPGSIRAASLTLV HHHHHHHHHCCCEEEEEHHHEEEEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MVSETLRPSPAIEGGVDSLFYCWRRVPSTRPGLEEEFQACKASEYWRVNYDEIKYTDFSQ CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCEEEECCCC SDYFKPKGLQTVSMRSRVTFTYGHFTLMTKLPRVEGGPMLWFGFETDDLFAGGAVHYCWF CCCCCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCEECCCEEEEEEE SGKGALTANIGGITKLVSMDLTRFLPQDVSEKYHWFSIVYRRGLALWYIDGKLRALASIS CCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECC NGDVKDGGVVYDKPPYIASWITDAPSPQLAVLLDIDAAPQVEFHWQGLNPWGLRVSNGDA CCCCCCCCEEEECCCCCEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEECCCCC EEPVRIRLYRDGSEETWAGLTVNPGVELLSQPLPGIGEKTLIMNAPGGELTIEYFTEGNW CCCEEEEEEECCCCCEEECEEECCCHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCC VEARSQALSSGTTVLGINEYTALIRFRYRAREPGSIRAASLTLV HHHHHHHHHCCCEEEEEHHHEEEEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA