Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159041046

Identifier: 159041046

GI number: 159041046

Start: 500421

End: 502877

Strand: Reverse

Name: 159041046

Synonym: Cmaq_0463

Alternate gene names: NA

Gene position: 502877-500421 (Counterclockwise)

Preceding gene: 159041047

Following gene: 159041044

Centisome position: 24.21

GC content: 42.65

Gene sequence:

>2457_bases
GTGAGGATCTCAAAAATACTACTGGTGGCTGCGGTATTATTAATACTAATTGAGTTTACTCCGCCTGTTCACGGGGAATC
ACCGCCAATGGTTTGGTCAACTCAGGTACCGTACTTGAATCCCAGTGGTGCACCTCATGATTTCAAGTACTTCATGGATA
TTAAGGAGCTTGGATTTAATACCATCTTCCTAACTGTTCCATGGGGTGCTGTTGAGTATGGGCCTAATGAGTATGACTTC
CATGTGCTTGACCAGTACATGAATTACACTAGGGCATTAGGCATTAGGGTCATTTTAGTCTTCTTCTACTCAGTGCCAGC
CGCCACCGGTGATTTTAACGCCACACCGCCCTGGCTTATTAATAATGGTGAACTTGAGGTGAATTCAAATGGCCACCCCC
AGTCTCCACCGGCCTTGGCTTGGTGGAATGAAACTGATAGGCAGTATTACTTCGGTTTCATTAAGACCGTGGTTTCAAGA
TACGTTAACTACAGTAACTTCCTAGGCGTACTTGTGGACTATGGTTGGCTTGACGATGACTGGGGTCCTGGTGTTAATGG
CTTACCTCCAGGCTATGCTAAGAGTGATATAGTGATGTTTCAGCATTGGTTAATGCAGGTTTACCACGATAACATAACTC
TACTCAATATGGAGTGGGGGACTGATTACAGGAGTTTTAGTCAAGTGAATCCACCTACACTGCCATTCATTGGTGATTGG
CGTTACTTCCAGGAGTTCAGGGTTTGGAGCATTAATGAGACCTACAGTGAATTATTCAGTATGATTAGGAGCATTATTGG
GCCCAATAGGTTACTCTTATTCTACTGGGGTGGTTCAATAGATGATATTTACAGCCTACAGATGCCTGAATTATACTTCC
AATTAGCTGAAAGGTACAACGTAACCATTGTACTTGATGACGCTGACTGGACTAACTTTGCAGTGTTCTTCGGTAACCTA
GCCAGGGTTTACCATGTTCACTTAATGATGGAGTGGACGCCTGTACCCAGTTCAAGTTCATACTACGGTAAATACATATC
CCACCTAATCCTCGGTTACCCATGGTTAATAGGCGGTGATTACTACGTCTTCATAAGGAGCCTAGACTGGTTCTACCCAA
CAGTCCAATTAAATACCATGGCCACTGGAATCTATGAGTTAATTAATGGAACTTACCCAAGCACTAAGGTTGCGTTACTG
TACATGACCATGTTCGGGGGTACTTACAGTGATTGGCGCTATTTAGTTCATGAAACAGGCCTAATACCCACTAGTTTATT
CAACGTGAATAATGAGTACGCCTACTACCCATTCAACATAATAACCGTTAATGAATTAGCCGCAGGCTTAGTTAACCTAT
CCAACTACAGGTACATTATATTAATGGTGCCTGAAAAACTAATCCCAAGTAGTGTGCGGGGTATTATTAATCAATGGAGA
AGTAGGGGTGGTGTCCTAATACCCTTTAATTCAAACTGGTTAAGCAGCGGCCTAGGTGGTGCCCTCAGTGGTATTGAGGA
ACCGGTAATAACTACTAACGCCTCAGTGGAGGCTTTCCCAATAATTAACAATGACTCAGTATTCCTAGCCCTAAATAATT
ACGGTAATCCACTTAACACGCTTCACGTTAACGTTAACTTAACAGCATTAGGCTTACGCAACGGCACGTACGCTGTAATT
AACCTTAATGGCGGCGACCTAATTAACGTAACCACTGGAGGCTTGGCTTCATTCAACATTAACCTATACTACACCCAGAG
TGCAGTTATGGTGGGTATAATACCCGTTAATCCGGTTAACATTATTGTTAATGTAAGTAGCGTTAACGCAAGCTACAATT
ACGATACCGGGGTCTTCAACATTAATATTAATGGGTTAATTTCACCTAAGGGTGATTACCTGATTATTGCATTAATACAC
CCCAATTTAACTCAAGCAGGTATGCAATTCACAAGCAATGGCCTAGTGTATGAGTCGGTTGCCGCCGGTGAGGCTACTAG
TAATGGTGGTTACTTCACCATCAACCTTAAAGTACCCATGTATCAATTGATGCTTAATAGCTATACCCTAGTGCTTAACG
TATACGTTATTAGTGATGGGTATGTAATCAACGGTGAATCATATTTACTTAACGTGAACCTTAACTCCACATTAACCCCC
TATGGTTGGGTACCCTCAGTAACAGGGGTTAACTTAAGCAAGTATGCCGTATTAATAATGGCTAAGCCTCCCCCAGTAAC
CACTACCACGGTCACTGTTCCAGTTAACCTAACTACCACGGTGACTACTGTGGTGACTACCACGGTGGTTAGTACTGTGG
TAAGTACTGAGGTAAGTACATTAACGTCAACCATCATTAGGAGCATTATCCCCGAGTCCACAGTGGTGGCTATTACTGTG
GGGGTCATTGTATTAATAATAATAGTAGCCTTAATCGCTAGGACTAAGGTTAAGTAA

Upstream 100 bases:

>100_bases
AGGCTTCATGCTAATTAAGTCTAGTAATCGTAAACACTGCATAATGTTTACCCTCCTTAATACCGTAAAATTAAAAAGCG
CGAATGCATCATGAATTAAT

Downstream 100 bases:

>100_bases
TAATTAATCCACTGTTTACAAATCGGTAAGTGCATTATTGTTTAATTAATGGGTAAGGTCCCCGGTAAGTAACTGCATCT
AGGGCGTGGAGTTGTGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 818; Mature: 818

Protein sequence:

>818_residues
MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFNTIFLTVPWGAVEYGPNEYDF
HVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLINNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSR
YVNYSNFLGVLVDYGWLDDDWGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW
RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYNVTIVLDDADWTNFAVFFGNL
ARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGDYYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALL
YMTMFGGTYSDWRYLVHETGLIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR
SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNTLHVNVNLTALGLRNGTYAVI
NLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVNIIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIH
PNLTQAGMQFTSNGLVYESVAAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP
YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVSTLTSTIIRSIIPESTVVAITV
GVIVLIIIVALIARTKVK

Sequences:

>Translated_818_residues
MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFNTIFLTVPWGAVEYGPNEYDF
HVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLINNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSR
YVNYSNFLGVLVDYGWLDDDWGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW
RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYNVTIVLDDADWTNFAVFFGNL
ARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGDYYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALL
YMTMFGGTYSDWRYLVHETGLIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR
SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNTLHVNVNLTALGLRNGTYAVI
NLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVNIIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIH
PNLTQAGMQFTSNGLVYESVAAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP
YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVSTLTSTIIRSIIPESTVVAITV
GVIVLIIIVALIARTKVK
>Mature_818_residues
MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFNTIFLTVPWGAVEYGPNEYDF
HVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLINNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSR
YVNYSNFLGVLVDYGWLDDDWGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW
RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYNVTIVLDDADWTNFAVFFGNL
ARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGDYYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALL
YMTMFGGTYSDWRYLVHETGLIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR
SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNTLHVNVNLTALGLRNGTYAVI
NLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVNIIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIH
PNLTQAGMQFTSNGLVYESVAAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP
YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVSTLTSTIIRSIIPESTVVAITV
GVIVLIIIVALIARTKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91311; Mature: 91311

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFN
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHEEEEHHHCCCC
TIFLTVPWGAVEYGPNEYDFHVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLI
EEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
NNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSRYVNYSNFLGVLVDYGWLDDD
ECCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCC
WGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCCCEECCC
RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYN
HHHEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHCC
VTIVLDDADWTNFAVFFGNLARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGD
EEEEEECCCCCEEHHHHHCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCC
YYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALLYMTMFGGTYSDWRYLVHETG
EEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCHHEEEEEEEHHCCCHHHHEEEEECCC
LIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR
CCEEEEECCCCCEEEEEEEEEEHHHHHHHHEECCCCEEEEEECCHHHCHHHHHHHHHHHH
SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNT
HCCCEEEEECCCHHHCCCCHHHHCCCCCEEECCCCEEEEEEECCCEEEEEECCCCCCEEE
LHVNVNLTALGLRNGTYAVINLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVN
EEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEEEEEEEEEECCEEEEEEEECCCEE
IIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIHPNLTQAGMQFTSNGLVYESV
EEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHCCEECCCCEEEEEE
AAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP
ECCCCCCCCCEEEEEEECHHHHHHHCCEEEEEEEEEEECCEEECCCEEEEEEECCCCCCC
YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVST
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
LTSTIIRSIIPESTVVAITVGVIVLIIIVALIARTKVK
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFN
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHEEEEHHHCCCC
TIFLTVPWGAVEYGPNEYDFHVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLI
EEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
NNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSRYVNYSNFLGVLVDYGWLDDD
ECCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCC
WGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCCCEECCC
RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYN
HHHEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHCC
VTIVLDDADWTNFAVFFGNLARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGD
EEEEEECCCCCEEHHHHHCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCC
YYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALLYMTMFGGTYSDWRYLVHETG
EEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCHHEEEEEEEHHCCCHHHHEEEEECCC
LIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR
CCEEEEECCCCCEEEEEEEEEEHHHHHHHHEECCCCEEEEEECCHHHCHHHHHHHHHHHH
SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNT
HCCCEEEEECCCHHHCCCCHHHHCCCCCEEECCCCEEEEEEECCCEEEEEECCCCCCEEE
LHVNVNLTALGLRNGTYAVINLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVN
EEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEEEEEEEEEECCEEEEEEEECCCEE
IIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIHPNLTQAGMQFTSNGLVYESV
EEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHCCEECCCCEEEEEE
AAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP
ECCCCCCCCCEEEEEEECHHHHHHHCCEEEEEEEEEEECCEEECCCEEEEEEECCCCCCC
YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVST
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
LTSTIIRSIIPESTVVAITVGVIVLIIIVALIARTKVK
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA