| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is 159041046
Identifier: 159041046
GI number: 159041046
Start: 500421
End: 502877
Strand: Reverse
Name: 159041046
Synonym: Cmaq_0463
Alternate gene names: NA
Gene position: 502877-500421 (Counterclockwise)
Preceding gene: 159041047
Following gene: 159041044
Centisome position: 24.21
GC content: 42.65
Gene sequence:
>2457_bases GTGAGGATCTCAAAAATACTACTGGTGGCTGCGGTATTATTAATACTAATTGAGTTTACTCCGCCTGTTCACGGGGAATC ACCGCCAATGGTTTGGTCAACTCAGGTACCGTACTTGAATCCCAGTGGTGCACCTCATGATTTCAAGTACTTCATGGATA TTAAGGAGCTTGGATTTAATACCATCTTCCTAACTGTTCCATGGGGTGCTGTTGAGTATGGGCCTAATGAGTATGACTTC CATGTGCTTGACCAGTACATGAATTACACTAGGGCATTAGGCATTAGGGTCATTTTAGTCTTCTTCTACTCAGTGCCAGC CGCCACCGGTGATTTTAACGCCACACCGCCCTGGCTTATTAATAATGGTGAACTTGAGGTGAATTCAAATGGCCACCCCC AGTCTCCACCGGCCTTGGCTTGGTGGAATGAAACTGATAGGCAGTATTACTTCGGTTTCATTAAGACCGTGGTTTCAAGA TACGTTAACTACAGTAACTTCCTAGGCGTACTTGTGGACTATGGTTGGCTTGACGATGACTGGGGTCCTGGTGTTAATGG CTTACCTCCAGGCTATGCTAAGAGTGATATAGTGATGTTTCAGCATTGGTTAATGCAGGTTTACCACGATAACATAACTC TACTCAATATGGAGTGGGGGACTGATTACAGGAGTTTTAGTCAAGTGAATCCACCTACACTGCCATTCATTGGTGATTGG CGTTACTTCCAGGAGTTCAGGGTTTGGAGCATTAATGAGACCTACAGTGAATTATTCAGTATGATTAGGAGCATTATTGG GCCCAATAGGTTACTCTTATTCTACTGGGGTGGTTCAATAGATGATATTTACAGCCTACAGATGCCTGAATTATACTTCC AATTAGCTGAAAGGTACAACGTAACCATTGTACTTGATGACGCTGACTGGACTAACTTTGCAGTGTTCTTCGGTAACCTA GCCAGGGTTTACCATGTTCACTTAATGATGGAGTGGACGCCTGTACCCAGTTCAAGTTCATACTACGGTAAATACATATC CCACCTAATCCTCGGTTACCCATGGTTAATAGGCGGTGATTACTACGTCTTCATAAGGAGCCTAGACTGGTTCTACCCAA CAGTCCAATTAAATACCATGGCCACTGGAATCTATGAGTTAATTAATGGAACTTACCCAAGCACTAAGGTTGCGTTACTG TACATGACCATGTTCGGGGGTACTTACAGTGATTGGCGCTATTTAGTTCATGAAACAGGCCTAATACCCACTAGTTTATT CAACGTGAATAATGAGTACGCCTACTACCCATTCAACATAATAACCGTTAATGAATTAGCCGCAGGCTTAGTTAACCTAT CCAACTACAGGTACATTATATTAATGGTGCCTGAAAAACTAATCCCAAGTAGTGTGCGGGGTATTATTAATCAATGGAGA AGTAGGGGTGGTGTCCTAATACCCTTTAATTCAAACTGGTTAAGCAGCGGCCTAGGTGGTGCCCTCAGTGGTATTGAGGA ACCGGTAATAACTACTAACGCCTCAGTGGAGGCTTTCCCAATAATTAACAATGACTCAGTATTCCTAGCCCTAAATAATT ACGGTAATCCACTTAACACGCTTCACGTTAACGTTAACTTAACAGCATTAGGCTTACGCAACGGCACGTACGCTGTAATT AACCTTAATGGCGGCGACCTAATTAACGTAACCACTGGAGGCTTGGCTTCATTCAACATTAACCTATACTACACCCAGAG TGCAGTTATGGTGGGTATAATACCCGTTAATCCGGTTAACATTATTGTTAATGTAAGTAGCGTTAACGCAAGCTACAATT ACGATACCGGGGTCTTCAACATTAATATTAATGGGTTAATTTCACCTAAGGGTGATTACCTGATTATTGCATTAATACAC CCCAATTTAACTCAAGCAGGTATGCAATTCACAAGCAATGGCCTAGTGTATGAGTCGGTTGCCGCCGGTGAGGCTACTAG TAATGGTGGTTACTTCACCATCAACCTTAAAGTACCCATGTATCAATTGATGCTTAATAGCTATACCCTAGTGCTTAACG TATACGTTATTAGTGATGGGTATGTAATCAACGGTGAATCATATTTACTTAACGTGAACCTTAACTCCACATTAACCCCC TATGGTTGGGTACCCTCAGTAACAGGGGTTAACTTAAGCAAGTATGCCGTATTAATAATGGCTAAGCCTCCCCCAGTAAC CACTACCACGGTCACTGTTCCAGTTAACCTAACTACCACGGTGACTACTGTGGTGACTACCACGGTGGTTAGTACTGTGG TAAGTACTGAGGTAAGTACATTAACGTCAACCATCATTAGGAGCATTATCCCCGAGTCCACAGTGGTGGCTATTACTGTG GGGGTCATTGTATTAATAATAATAGTAGCCTTAATCGCTAGGACTAAGGTTAAGTAA
Upstream 100 bases:
>100_bases AGGCTTCATGCTAATTAAGTCTAGTAATCGTAAACACTGCATAATGTTTACCCTCCTTAATACCGTAAAATTAAAAAGCG CGAATGCATCATGAATTAAT
Downstream 100 bases:
>100_bases TAATTAATCCACTGTTTACAAATCGGTAAGTGCATTATTGTTTAATTAATGGGTAAGGTCCCCGGTAAGTAACTGCATCT AGGGCGTGGAGTTGTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFNTIFLTVPWGAVEYGPNEYDF HVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLINNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSR YVNYSNFLGVLVDYGWLDDDWGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYNVTIVLDDADWTNFAVFFGNL ARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGDYYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALL YMTMFGGTYSDWRYLVHETGLIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNTLHVNVNLTALGLRNGTYAVI NLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVNIIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIH PNLTQAGMQFTSNGLVYESVAAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVSTLTSTIIRSIIPESTVVAITV GVIVLIIIVALIARTKVK
Sequences:
>Translated_818_residues MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFNTIFLTVPWGAVEYGPNEYDF HVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLINNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSR YVNYSNFLGVLVDYGWLDDDWGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYNVTIVLDDADWTNFAVFFGNL ARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGDYYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALL YMTMFGGTYSDWRYLVHETGLIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNTLHVNVNLTALGLRNGTYAVI NLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVNIIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIH PNLTQAGMQFTSNGLVYESVAAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVSTLTSTIIRSIIPESTVVAITV GVIVLIIIVALIARTKVK >Mature_818_residues MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFNTIFLTVPWGAVEYGPNEYDF HVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLINNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSR YVNYSNFLGVLVDYGWLDDDWGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYNVTIVLDDADWTNFAVFFGNL ARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGDYYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALL YMTMFGGTYSDWRYLVHETGLIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNTLHVNVNLTALGLRNGTYAVI NLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVNIIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIH PNLTQAGMQFTSNGLVYESVAAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVSTLTSTIIRSIIPESTVVAITV GVIVLIIIVALIARTKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91311; Mature: 91311
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFN CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHEEEEHHHCCCC TIFLTVPWGAVEYGPNEYDFHVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLI EEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE NNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSRYVNYSNFLGVLVDYGWLDDD ECCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCC WGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCCCEECCC RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYN HHHEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHCC VTIVLDDADWTNFAVFFGNLARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGD EEEEEECCCCCEEHHHHHCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCC YYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALLYMTMFGGTYSDWRYLVHETG EEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCHHEEEEEEEHHCCCHHHHEEEEECCC LIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR CCEEEEECCCCCEEEEEEEEEEHHHHHHHHEECCCCEEEEEECCHHHCHHHHHHHHHHHH SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNT HCCCEEEEECCCHHHCCCCHHHHCCCCCEEECCCCEEEEEEECCCEEEEEECCCCCCEEE LHVNVNLTALGLRNGTYAVINLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVN EEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEEEEEEEEEECCEEEEEEEECCCEE IIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIHPNLTQAGMQFTSNGLVYESV EEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHCCEECCCCEEEEEE AAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP ECCCCCCCCCEEEEEEECHHHHHHHCCEEEEEEEEEEECCEEECCCEEEEEEECCCCCCC YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVST CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH LTSTIIRSIIPESTVVAITVGVIVLIIIVALIARTKVK HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRISKILLVAAVLLILIEFTPPVHGESPPMVWSTQVPYLNPSGAPHDFKYFMDIKELGFN CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHEEEEHHHCCCC TIFLTVPWGAVEYGPNEYDFHVLDQYMNYTRALGIRVILVFFYSVPAATGDFNATPPWLI EEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE NNGELEVNSNGHPQSPPALAWWNETDRQYYFGFIKTVVSRYVNYSNFLGVLVDYGWLDDD ECCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCC WGPGVNGLPPGYAKSDIVMFQHWLMQVYHDNITLLNMEWGTDYRSFSQVNPPTLPFIGDW CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCCCEECCC RYFQEFRVWSINETYSELFSMIRSIIGPNRLLLFYWGGSIDDIYSLQMPELYFQLAERYN HHHEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHCC VTIVLDDADWTNFAVFFGNLARVYHVHLMMEWTPVPSSSSYYGKYISHLILGYPWLIGGD EEEEEECCCCCEEHHHHHCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCC YYVFIRSLDWFYPTVQLNTMATGIYELINGTYPSTKVALLYMTMFGGTYSDWRYLVHETG EEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCHHEEEEEEEHHCCCHHHHEEEEECCC LIPTSLFNVNNEYAYYPFNIITVNELAAGLVNLSNYRYIILMVPEKLIPSSVRGIINQWR CCEEEEECCCCCEEEEEEEEEEHHHHHHHHEECCCCEEEEEECCHHHCHHHHHHHHHHHH SRGGVLIPFNSNWLSSGLGGALSGIEEPVITTNASVEAFPIINNDSVFLALNNYGNPLNT HCCCEEEEECCCHHHCCCCHHHHCCCCCEEECCCCEEEEEEECCCEEEEEECCCCCCEEE LHVNVNLTALGLRNGTYAVINLNGGDLINVTTGGLASFNINLYYTQSAVMVGIIPVNPVN EEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEEEEEEEEEECCEEEEEEEECCCEE IIVNVSSVNASYNYDTGVFNININGLISPKGDYLIIALIHPNLTQAGMQFTSNGLVYESV EEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCHHHCCEECCCCEEEEEE AAGEATSNGGYFTINLKVPMYQLMLNSYTLVLNVYVISDGYVINGESYLLNVNLNSTLTP ECCCCCCCCCEEEEEEECHHHHHHHCCEEEEEEEEEEECCEEECCCEEEEEEECCCCCCC YGWVPSVTGVNLSKYAVLIMAKPPPVTTTTVTVPVNLTTTVTTVVTTTVVSTVVSTEVST CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH LTSTIIRSIIPESTVVAITVGVIVLIIIVALIARTKVK HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA