| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is bglY [H]
Identifier: 159040991
GI number: 159040991
Start: 443642
End: 445111
Strand: Reverse
Name: bglY [H]
Synonym: Cmaq_0408
Alternate gene names: 159040991
Gene position: 445111-443642 (Counterclockwise)
Preceding gene: 159040992
Following gene: 159040988
Centisome position: 21.42
GC content: 45.92
Gene sequence:
>1470_bases ATGGATATCTCATTTCCAAAATCCTTCAGGTTCGGCTGGTCCCAGGCGGGGTTCCAGTCTGAAATGGGTACTCCAGGTAG TGAGGACCCTAACACCGACTGGTACGTGTGGGTTCATGATCCTGAGAACATTGCTTCGGGCTTAGTTAGCGGTGATTTAC CTGAACATGGGCCAGGTTACTGGGGGCTTTACAGGATGTTTCATGATAATGCGGTTAAAATGGGGCTTGATATCGCTAGG ATTAATGTTGAGTGGTCTCGAATATTCCCTAAGCCAATGCCTGACCCACCGCAGGGTAACGTGGAGGTTAAGGGTAATGA CGTGTTGGCCGTGCATGTTGATGAGAATGATCTCAAGAGGCTTGATGAAGCCGCTAACCAGGAGGCTGTGAGGCATTATA GGGAGATTTTCAGTGACCTTAAGGCTAGGGGAATACACTTCATACTGAACTTCTACCATTGGCCACTGCCCCTTTGGGTC CATGACCCAATCAGGGTTAGGAAAGGTGACTTAAGTGGACCCACTGGTTGGCTTGATGTTAAGACCGTCATTAACTTCGC TAGGTTTGCAGCCTACACTGCCTGGAAGTTCGATGACCTTGCCGATGAGTATTCAACAATGAATGAACCCAATGTAGTTC ACAGTAATGGCTACATGTGGGTTAAGTCAGGTTTCCCACCAAGTTACCTTAACTTTGAATTATCAAGGAGAGTCATGGTT AATTTAATACAGGCCCATGCTAGGGCTTATGACGCTGTTAAGGCTATTTCCAAGAAGCCCATTGGCATAATATACGCTAA CTCATCCTTCACACCGCTAACTGATAAGGATGCTAAGGCCGTTGAGTTGGCTGAGTATGATTCAAGGTGGATATTCTTCG ATGCAATAATTAAGGGTGAATTAATGGGGGTTACTAGGGATGACTTGAAGGGTAGGCTTGACTGGATTGGGGTAAACTAC TACTCTAGAACAGTGGTTAAGCTTATTGGTGAGAAATCCTACGTGAGCATACCTGGGTATGGGTATGGTTGCGAGAGGAA TTCAATTAGCCCTGATGGTAGACCATGCAGTGACTTCGGTTGGGAATTCTACCCGGAGGGTCTTTATGATGTAATAATGA AGTACTGGAGCCGCTATCACTTACCCATATACGTTACTGAGAATGGTATTGCTGATGCGGCTGATTACCAGAGGCCATAT TACTTAGTTAGCCACATTTACCAAGTCTATAGGGCTATTCAAGAGGGGGCTAACGTTAAGGGTTACCTACACTGGTCCCT GACTGATAATTACGAGTGGGCCTCAGGCTTCAGCATGAGGTTTGGTTTACTTCAAGTAGACTACTCCACTAAGAAGCAGT ACTGGAGGCCATCAGCCTATGTTTACAGGGAGATTGCTAAATCTAAGGCTATACCAGAGGAGTTAATGCACCTTAACACT ATACCACCCACTAGGTCATTAAGGAGGTGA
Upstream 100 bases:
>100_bases ATGGTGACTTAGTCAACCTGATTAGGGACTTAACCTTAACAACACTTTTAAGGGGCATTCAACCTTAATGCTTAAAAGTA TCTAAACTAGATAATAATTA
Downstream 100 bases:
>100_bases ATTAACCAGTGCTCAATGTGGCTTGACTTGCCTTAAAGCAGAGGATATTATCCTTCAGTGACTCAAGGTTCTCTAGGAAG CTTGGTAATTGGTGTGAGGC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Lactase [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MDISFPKSFRFGWSQAGFQSEMGTPGSEDPNTDWYVWVHDPENIASGLVSGDLPEHGPGYWGLYRMFHDNAVKMGLDIAR INVEWSRIFPKPMPDPPQGNVEVKGNDVLAVHVDENDLKRLDEAANQEAVRHYREIFSDLKARGIHFILNFYHWPLPLWV HDPIRVRKGDLSGPTGWLDVKTVINFARFAAYTAWKFDDLADEYSTMNEPNVVHSNGYMWVKSGFPPSYLNFELSRRVMV NLIQAHARAYDAVKAISKKPIGIIYANSSFTPLTDKDAKAVELAEYDSRWIFFDAIIKGELMGVTRDDLKGRLDWIGVNY YSRTVVKLIGEKSYVSIPGYGYGCERNSISPDGRPCSDFGWEFYPEGLYDVIMKYWSRYHLPIYVTENGIADAADYQRPY YLVSHIYQVYRAIQEGANVKGYLHWSLTDNYEWASGFSMRFGLLQVDYSTKKQYWRPSAYVYREIAKSKAIPEELMHLNT IPPTRSLRR
Sequences:
>Translated_489_residues MDISFPKSFRFGWSQAGFQSEMGTPGSEDPNTDWYVWVHDPENIASGLVSGDLPEHGPGYWGLYRMFHDNAVKMGLDIAR INVEWSRIFPKPMPDPPQGNVEVKGNDVLAVHVDENDLKRLDEAANQEAVRHYREIFSDLKARGIHFILNFYHWPLPLWV HDPIRVRKGDLSGPTGWLDVKTVINFARFAAYTAWKFDDLADEYSTMNEPNVVHSNGYMWVKSGFPPSYLNFELSRRVMV NLIQAHARAYDAVKAISKKPIGIIYANSSFTPLTDKDAKAVELAEYDSRWIFFDAIIKGELMGVTRDDLKGRLDWIGVNY YSRTVVKLIGEKSYVSIPGYGYGCERNSISPDGRPCSDFGWEFYPEGLYDVIMKYWSRYHLPIYVTENGIADAADYQRPY YLVSHIYQVYRAIQEGANVKGYLHWSLTDNYEWASGFSMRFGLLQVDYSTKKQYWRPSAYVYREIAKSKAIPEELMHLNT IPPTRSLRR >Mature_489_residues MDISFPKSFRFGWSQAGFQSEMGTPGSEDPNTDWYVWVHDPENIASGLVSGDLPEHGPGYWGLYRMFHDNAVKMGLDIAR INVEWSRIFPKPMPDPPQGNVEVKGNDVLAVHVDENDLKRLDEAANQEAVRHYREIFSDLKARGIHFILNFYHWPLPLWV HDPIRVRKGDLSGPTGWLDVKTVINFARFAAYTAWKFDDLADEYSTMNEPNVVHSNGYMWVKSGFPPSYLNFELSRRVMV NLIQAHARAYDAVKAISKKPIGIIYANSSFTPLTDKDAKAVELAEYDSRWIFFDAIIKGELMGVTRDDLKGRLDWIGVNY YSRTVVKLIGEKSYVSIPGYGYGCERNSISPDGRPCSDFGWEFYPEGLYDVIMKYWSRYHLPIYVTENGIADAADYQRPY YLVSHIYQVYRAIQEGANVKGYLHWSLTDNYEWASGFSMRFGLLQVDYSTKKQYWRPSAYVYREIAKSKAIPEELMHLNT IPPTRSLRR
Specific function: Can Hydrolyze Salicin And Arbutin. [C]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI13273313, Length=518, Percent_Identity=23.7451737451737, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI32481206, Length=520, Percent_Identity=24.2307692307692, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI110681710, Length=517, Percent_Identity=22.4371373307544, Blast_Score=96, Evalue=7e-20, Organism=Escherichia coli, GI2367270, Length=405, Percent_Identity=23.9506172839506, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI2367174, Length=493, Percent_Identity=22.7180527383367, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1789070, Length=408, Percent_Identity=22.3039215686275, Blast_Score=82, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17552856, Length=521, Percent_Identity=24.9520153550864, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17539390, Length=442, Percent_Identity=24.2081447963801, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI21356577, Length=519, Percent_Identity=23.5067437379576, Blast_Score=103, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.23 [H]
Molecular weight: Translated: 56388; Mature: 56388
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISFPKSFRFGWSQAGFQSEMGTPGSEDPNTDWYVWVHDPENIASGLVSGDLPEHGPGY CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCH WGLYRMFHDNAVKMGLDIARINVEWSRIFPKPMPDPPQGNVEVKGNDVLAVHVDENDLKR HHHHHHHHCCHHHCCCEEEEEEEEHHHCCCCCCCCCCCCCEEECCCEEEEEEECHHHHHH LDEAANQEAVRHYREIFSDLKARGIHFILNFYHWPLPLWVHDPIRVRKGDLSGPTGWLDV HHHHHCHHHHHHHHHHHHHHHHCCEEEEEEHHCCCCCEEECCCCEEECCCCCCCCCCEEH KTVINFARFAAYTAWKFDDLADEYSTMNEPNVVHSNGYMWVKSGFPPSYLNFELSRRVMV HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHH NLIQAHARAYDAVKAISKKPIGIIYANSSFTPLTDKDAKAVELAEYDSRWIFFDAIIKGE HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEHHHCCCCEEEEEEEECCC LMGVTRDDLKGRLDWIGVNYYSRTVVKLIGEKSYVSIPGYGYGCERNSISPDGRPCSDFG EECCCHHHHCCCEEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHCC WEFYPEGLYDVIMKYWSRYHLPIYVTENGIADAADYQRPYYLVSHIYQVYRAIQEGANVK CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCE GYLHWSLTDNYEWASGFSMRFGLLQVDYSTKKQYWRPSAYVYREIAKSKAIPEELMHLNT EEEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCC IPPTRSLRR CCCCHHHCC >Mature Secondary Structure MDISFPKSFRFGWSQAGFQSEMGTPGSEDPNTDWYVWVHDPENIASGLVSGDLPEHGPGY CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCH WGLYRMFHDNAVKMGLDIARINVEWSRIFPKPMPDPPQGNVEVKGNDVLAVHVDENDLKR HHHHHHHHCCHHHCCCEEEEEEEEHHHCCCCCCCCCCCCCEEECCCEEEEEEECHHHHHH LDEAANQEAVRHYREIFSDLKARGIHFILNFYHWPLPLWVHDPIRVRKGDLSGPTGWLDV HHHHHCHHHHHHHHHHHHHHHHCCEEEEEEHHCCCCCEEECCCCEEECCCCCCCCCCEEH KTVINFARFAAYTAWKFDDLADEYSTMNEPNVVHSNGYMWVKSGFPPSYLNFELSRRVMV HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHH NLIQAHARAYDAVKAISKKPIGIIYANSSFTPLTDKDAKAVELAEYDSRWIFFDAIIKGE HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEHHHCCCCEEEEEEEECCC LMGVTRDDLKGRLDWIGVNYYSRTVVKLIGEKSYVSIPGYGYGCERNSISPDGRPCSDFG EECCCHHHHCCCEEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHCC WEFYPEGLYDVIMKYWSRYHLPIYVTENGIADAADYQRPYYLVSHIYQVYRAIQEGANVK CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCE GYLHWSLTDNYEWASGFSMRFGLLQVDYSTKKQYWRPSAYVYREIAKSKAIPEELMHLNT EEEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCC IPPTRSLRR CCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA