| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040992
Identifier: 159040992
GI number: 159040992
Start: 445268
End: 445900
Strand: Reverse
Name: 159040992
Synonym: Cmaq_0409
Alternate gene names: NA
Gene position: 445900-445268 (Counterclockwise)
Preceding gene: 159040994
Following gene: 159040991
Centisome position: 21.46
GC content: 46.45
Gene sequence:
>633_bases ATGTACACTATTGACCTCTTCAACAATAGGGCTAATGAATATGACTCATGGTACAGTAAACACCAGTTACTGGCTAAGTC AGAGGAGGATACTATTAAGGCGCTTGGATTAAGTGGCCTAGGCCTAGATGTTGGGGCTGGAAGCGGCTTCTTCACAAGGC TAATTAACGCCATTGCCCTTGAACCATCACCAGGAATGATTAAGCTAGCTAAGGATAGGACCTGGGCCGTGGTCTCGGGG GTTGGAGAGTTGATGCCTATTAGGGATTCATCAATGGACTACGTAATAATAGTGGTCACATTATGCTTTGCGATGAATCC TGAAGCCATACTGAGGGAAAGCATTAGGGTGCTTAAAAGTAATGGCAGGTTAGTGGCCTGCATAGTACCCTTGGAAAGCC AGTGGGGGGCATTGTATAGTGAGCTTGGTTCAAGGGGACACCCGTACTACTCCAGGGCCAGGTTCCTAACTATTAAGCAG GTTACTGAGGCGCTTATAAGGCTTGGAGTAAGGGTTACTGGGTACGTGGCAACCCTCAGTAGGGGTGTGGGTGAGTATTA TGAGGCACCAAGTGTTATTAATAATTCTGATGCAGGTAGATATGGTTTCGTATGCGTTAATGCAGTTAAGTGA
Upstream 100 bases:
>100_bases CCGGTCACCGATAACACTACCGATATCGGAATTTATAAACCTTTCGCCCTCGATTAAATAAGTGGATAACATATAAAAGA CCCCATTAAGGTGATTAATC
Downstream 100 bases:
>100_bases AGGTTACTATGCGGGAATAATGAATTATTAGCAGCAGGTTACTGGATTCGCTGGGAATGGTGACTTAGTCAACCTGATTA GGGACTTAACCTTAACAACA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MYTIDLFNNRANEYDSWYSKHQLLAKSEEDTIKALGLSGLGLDVGAGSGFFTRLINAIALEPSPGMIKLAKDRTWAVVSG VGELMPIRDSSMDYVIIVVTLCFAMNPEAILRESIRVLKSNGRLVACIVPLESQWGALYSELGSRGHPYYSRARFLTIKQ VTEALIRLGVRVTGYVATLSRGVGEYYEAPSVINNSDAGRYGFVCVNAVK
Sequences:
>Translated_210_residues MYTIDLFNNRANEYDSWYSKHQLLAKSEEDTIKALGLSGLGLDVGAGSGFFTRLINAIALEPSPGMIKLAKDRTWAVVSG VGELMPIRDSSMDYVIIVVTLCFAMNPEAILRESIRVLKSNGRLVACIVPLESQWGALYSELGSRGHPYYSRARFLTIKQ VTEALIRLGVRVTGYVATLSRGVGEYYEAPSVINNSDAGRYGFVCVNAVK >Mature_210_residues MYTIDLFNNRANEYDSWYSKHQLLAKSEEDTIKALGLSGLGLDVGAGSGFFTRLINAIALEPSPGMIKLAKDRTWAVVSG VGELMPIRDSSMDYVIIVVTLCFAMNPEAILRESIRVLKSNGRLVACIVPLESQWGALYSELGSRGHPYYSRARFLTIKQ VTEALIRLGVRVTGYVATLSRGVGEYYEAPSVINNSDAGRYGFVCVNAVK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0638 and MJ1252 and M.tuberculosis Rv2003c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 23066; Mature: 23066
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTIDLFNNRANEYDSWYSKHQLLAKSEEDTIKALGLSGLGLDVGAGSGFFTRLINAIAL CEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHCC EPSPGMIKLAKDRTWAVVSGVGELMPIRDSSMDYVIIVVTLCFAMNPEAILRESIRVLKS CCCCCEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHC NGRLVACIVPLESQWGALYSELGSRGHPYYSRARFLTIKQVTEALIRLGVRVTGYVATLS CCCEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHEEEHHHHHHHHHHHCCHHHHHHHHHH RGVGEYYEAPSVINNSDAGRYGFVCVNAVK HHHHHHHCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MYTIDLFNNRANEYDSWYSKHQLLAKSEEDTIKALGLSGLGLDVGAGSGFFTRLINAIAL CEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHCC EPSPGMIKLAKDRTWAVVSGVGELMPIRDSSMDYVIIVVTLCFAMNPEAILRESIRVLKS CCCCCEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHC NGRLVACIVPLESQWGALYSELGSRGHPYYSRARFLTIKQVTEALIRLGVRVTGYVATLS CCCEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHEEEHHHHHHHHHHHCCHHHHHHHHHH RGVGEYYEAPSVINNSDAGRYGFVCVNAVK HHHHHHHCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]