| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is yhdN [H]
Identifier: 159040731
GI number: 159040731
Start: 168487
End: 169443
Strand: Reverse
Name: yhdN [H]
Synonym: Cmaq_0143
Alternate gene names: 159040731
Gene position: 169443-168487 (Counterclockwise)
Preceding gene: 159040732
Following gene: 159040729
Centisome position: 8.16
GC content: 45.56
Gene sequence:
>957_bases ATGTTAACCATGGAGTATGTATCTTTAGGCAAAACTGGGTTAAAGATATCTATAATTGGTCTAGGTGCGTGGCAATTCGG TGGAGATGCCTGGGGCCCGTATGAGTACCAGGTGGCTAAGACGGTGATAAGTAAGGCCGTTGAAGTAGGCATTAACTTCA TAGACACTGCAGCAGTCTACGGTAGGGGTAGGAGTGAGGAGTTTGTTGGTAGGGCTATTAAGGAGCTTGGTATTAGGGAT CAGGTTATTATCGCCACTAAGGTGCCTGGTGACTGGCATAGGTATGATGATGTGATTAAGGCAGCACATAGGAGTAAGGA ACGCCTTGGCATTGATGCAATAGATTTACTTCAACTGCATTGGCCAGCAGCATGGTTAAACACACCTGTTTGCGAAACAA TGAGGGCTATGGAGAAGCTTGTTAACGATGGTGTAGTAAGGTACATTGGGGTTAGCAACTACCTGCCACCACTGCTTGAT TACGCAAGGAAATGCCTATCCAAGACTGATATAGTGAGTACCCAGAATAGGTATAGTATAGTTGAGAGGGAGGTTGAGAA GGAGATTCTACCTTACGTCCAGAGGGAGGGCTTAACATTAATAGCGTGGAGTCCATTAGCCAAGGGGGTTGTTACCGGTA AGTATAGTTTCGAGAATAGGCCTAGGAATGACTTAAGGGCTGGGGATCCATTATTCATGGATGATAACTTCAGGGAAATA AGCAGTAAGCTAGTTCCGGTAATAAAGGAGGTTGCATCAAAGTACGGTAAGACACCGGCTCAAGTGGCATTAAACTGGTT GATAATGCACCCGAATGTCGTACCAATACCAGGGGCTAGGAATGCTGAGCAGGTTGAGGAGAATGCTGGGGCAGCTGGAT GGAGAATGAGTGAGGAGGACTTCCTTAAGTTAACGAAGGCCAGTGATTCACTTAGAATAAGCTACGTAAACTTCTAA
Upstream 100 bases:
>100_bases ACTGGAGCAGATACTTGACGCCTTAGGCATACCCTTCGAGAACATTGTTGGGTCAAAGCTAATGTAGGAGACGCGTAATA TTTAATAATTCACTTAAGGC
Downstream 100 bases:
>100_bases AGTAATAAGGGCTCAGAGCAGGTCAGTTTCATCAATAATCAGTTGATTTATGTTCCTCACCAACCCTAAGCACTTAAGGT ACTTTTTATGTATTTACATA
Product: aldo/keto reductase
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MLTMEYVSLGKTGLKISIIGLGAWQFGGDAWGPYEYQVAKTVISKAVEVGINFIDTAAVYGRGRSEEFVGRAIKELGIRD QVIIATKVPGDWHRYDDVIKAAHRSKERLGIDAIDLLQLHWPAAWLNTPVCETMRAMEKLVNDGVVRYIGVSNYLPPLLD YARKCLSKTDIVSTQNRYSIVEREVEKEILPYVQREGLTLIAWSPLAKGVVTGKYSFENRPRNDLRAGDPLFMDDNFREI SSKLVPVIKEVASKYGKTPAQVALNWLIMHPNVVPIPGARNAEQVEENAGAAGWRMSEEDFLKLTKASDSLRISYVNF
Sequences:
>Translated_318_residues MLTMEYVSLGKTGLKISIIGLGAWQFGGDAWGPYEYQVAKTVISKAVEVGINFIDTAAVYGRGRSEEFVGRAIKELGIRD QVIIATKVPGDWHRYDDVIKAAHRSKERLGIDAIDLLQLHWPAAWLNTPVCETMRAMEKLVNDGVVRYIGVSNYLPPLLD YARKCLSKTDIVSTQNRYSIVEREVEKEILPYVQREGLTLIAWSPLAKGVVTGKYSFENRPRNDLRAGDPLFMDDNFREI SSKLVPVIKEVASKYGKTPAQVALNWLIMHPNVVPIPGARNAEQVEENAGAAGWRMSEEDFLKLTKASDSLRISYVNF >Mature_318_residues MLTMEYVSLGKTGLKISIIGLGAWQFGGDAWGPYEYQVAKTVISKAVEVGINFIDTAAVYGRGRSEEFVGRAIKELGIRD QVIIATKVPGDWHRYDDVIKAAHRSKERLGIDAIDLLQLHWPAAWLNTPVCETMRAMEKLVNDGVVRYIGVSNYLPPLLD YARKCLSKTDIVSTQNRYSIVEREVEKEILPYVQREGLTLIAWSPLAKGVVTGKYSFENRPRNDLRAGDPLFMDDNFREI SSKLVPVIKEVASKYGKTPAQVALNWLIMHPNVVPIPGARNAEQVEENAGAAGWRMSEEDFLKLTKASDSLRISYVNF
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=308, Percent_Identity=32.1428571428571, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI4504825, Length=306, Percent_Identity=32.0261437908497, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI27436964, Length=307, Percent_Identity=30.2931596091205, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI27436962, Length=307, Percent_Identity=30.2931596091205, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436966, Length=307, Percent_Identity=29.9674267100977, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI27436971, Length=310, Percent_Identity=29.0322580645161, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI223718702, Length=298, Percent_Identity=30.5369127516779, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI24497577, Length=333, Percent_Identity=26.1261261261261, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI5174391, Length=333, Percent_Identity=26.1261261261261, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI41152114, Length=300, Percent_Identity=30.3333333333333, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI41327764, Length=271, Percent_Identity=30.6273062730627, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4502049, Length=331, Percent_Identity=27.4924471299094, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI223468663, Length=318, Percent_Identity=26.1006289308176, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI45446745, Length=317, Percent_Identity=25.2365930599369, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4503285, Length=317, Percent_Identity=25.2365930599369, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI310109922, Length=300, Percent_Identity=25.6666666666667, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI310109920, Length=317, Percent_Identity=24.9211356466877, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI87081735, Length=321, Percent_Identity=34.8909657320872, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788070, Length=330, Percent_Identity=31.2121212121212, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1789375, Length=313, Percent_Identity=30.6709265175719, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1789199, Length=342, Percent_Identity=29.8245614035088, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788081, Length=294, Percent_Identity=29.9319727891156, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI87082198, Length=296, Percent_Identity=27.027027027027, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787674, Length=302, Percent_Identity=26.8211920529801, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1786400, Length=288, Percent_Identity=28.4722222222222, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI48994888, Length=320, Percent_Identity=24.0625, Blast_Score=68, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17564128, Length=343, Percent_Identity=25.3644314868805, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71998625, Length=312, Percent_Identity=27.5641025641026, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17566692, Length=309, Percent_Identity=27.831715210356, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI212645785, Length=300, Percent_Identity=26, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17550248, Length=322, Percent_Identity=24.8447204968944, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=339, Percent_Identity=28.3185840707965, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6323998, Length=321, Percent_Identity=27.1028037383178, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=276, Percent_Identity=26.8115942028986, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6324694, Length=318, Percent_Identity=26.4150943396226, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6321896, Length=335, Percent_Identity=22.089552238806, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6320576, Length=325, Percent_Identity=26.1538461538462, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319951, Length=233, Percent_Identity=26.6094420600858, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=245, Percent_Identity=24.4897959183673, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6322556, Length=303, Percent_Identity=26.7326732673267, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644950, Length=346, Percent_Identity=28.3236994219653, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24646155, Length=316, Percent_Identity=29.1139240506329, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI221378297, Length=366, Percent_Identity=27.0491803278689, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24657054, Length=337, Percent_Identity=25.5192878338279, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI20129731, Length=310, Percent_Identity=27.0967741935484, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646159, Length=220, Percent_Identity=30, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24663317, Length=331, Percent_Identity=24.773413897281, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI45553081, Length=325, Percent_Identity=27.0769230769231, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356425, Length=314, Percent_Identity=24.5222929936306, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24662789, Length=304, Percent_Identity=24.3421052631579, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24640980, Length=333, Percent_Identity=24.9249249249249, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24662781, Length=299, Percent_Identity=28.0936454849498, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45549126, Length=333, Percent_Identity=24.9249249249249, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24662785, Length=307, Percent_Identity=27.0358306188925, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35632; Mature: 35632
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00062 ALDOKETO_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTMEYVSLGKTGLKISIIGLGAWQFGGDAWGPYEYQVAKTVISKAVEVGINFIDTAAVY CCEEHHHHCCCCCCEEEEEEEECEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GRGRSEEFVGRAIKELGIRDQVIIATKVPGDWHRYDDVIKAAHRSKERLGIDAIDLLQLH CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH WPAAWLNTPVCETMRAMEKLVNDGVVRYIGVSNYLPPLLDYARKCLSKTDIVSTQNRYSI CCHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHCCHHHHHHHHHHHCHHHHCCCCHHHHH VEREVEKEILPYVQREGLTLIAWSPLAKGVVTGKYSFENRPRNDLRAGDPLFMDDNFREI HHHHHHHHHHHHHHHCCCEEEEECHHHCCEEECEECCCCCCCCCCCCCCCCEECCCHHHH SSKLVPVIKEVASKYGKTPAQVALNWLIMHPNVVPIPGARNAEQVEENAGAAGWRMSEED HHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCEEECCCCCCHHHHHHCCCCCCCCCCHHH FLKLTKASDSLRISYVNF HHHHHCCCCCEEEEEECC >Mature Secondary Structure MLTMEYVSLGKTGLKISIIGLGAWQFGGDAWGPYEYQVAKTVISKAVEVGINFIDTAAVY CCEEHHHHCCCCCCEEEEEEEECEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GRGRSEEFVGRAIKELGIRDQVIIATKVPGDWHRYDDVIKAAHRSKERLGIDAIDLLQLH CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH WPAAWLNTPVCETMRAMEKLVNDGVVRYIGVSNYLPPLLDYARKCLSKTDIVSTQNRYSI CCHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHCCHHHHHHHHHHHCHHHHCCCCHHHHH VEREVEKEILPYVQREGLTLIAWSPLAKGVVTGKYSFENRPRNDLRAGDPLFMDDNFREI HHHHHHHHHHHHHHHCCCEEEEECHHHCCEEECEECCCCCCCCCCCCCCCCEECCCHHHH SSKLVPVIKEVASKYGKTPAQVALNWLIMHPNVVPIPGARNAEQVEENAGAAGWRMSEED HHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCEEECCCCCCHHHHHHCCCCCCCCCCHHH FLKLTKASDSLRISYVNF HHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]