Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159040729

Identifier: 159040729

GI number: 159040729

Start: 166275

End: 167270

Strand: Reverse

Name: 159040729

Synonym: Cmaq_0141

Alternate gene names: NA

Gene position: 167270-166275 (Counterclockwise)

Preceding gene: 159040731

Following gene: 159040728

Centisome position: 8.05

GC content: 40.86

Gene sequence:

>996_bases
GTGTCATTACTTAACGTTGAGGAGCTTGAGAAGAAGATAGAAGAGTTGAACGTTAAGTTGAATGATGTTAATGGTGAGTT
GGATAAGACTTATAAGGAATTGAATGAACTTAAAGGCAAGTTAAATGAGAAGAGAAGCCAATTAACAGCCGTAATAAACC
AATTAAACAGTAAGAGGGCTGAGTTAAGTGAATTAAAGAATAAGATTAATGAATTAATCAGTAAAAGGAATAATCTCATT
GAGTATCTTAAGAAGAATAAGGCTGAGAAGGATGAGGTGAGTAAGAGGATTATTCAATTAAGGGATAGGGTTAGGAATCT
TAGGGAGCTTTTAAAGGAGCTTGAGGCATCAGGTGGTAGGGTTCAGGATAAGGATAAGTTAAGGGTCTTGATTGAGAGGC
TTGAGTTTGAGCATGATACATCACCTTCAGATTTAAAGAAGGAGATGGAGTTCTATAAAACCATTACAGAGCTTGAGAAG
AACCTTGAGAAGGCTGAGACACTGGATGAGCTTAGGAATCATATAGCCAACACTGTTAAGGAAATTGAGGAATTAAGTAG
AAGACGTACTGAATTAGTCAACAGCCTCAAGTCAACCTACGAGGGTAGCTATAAGCCGCTTAAGGATGAGTTAATGGGGC
TTAGGAGTAAGGTGAATGAAATTAGAAATAGTATAGGTGAACTTAAGAAGAGGAGGGATGAGTTGAAGGCTGAGAGGGAT
GAGATCAAGAAGCAGATGCTGGGCCTCTACGCTAGAATAAAGGAGCTTAAGGAGACTAAGAGGCAGATTATTGATGAGAT
TAATAAGAATAGGCTACTCCTAGTGGCTGCAAGGAAATCAGCAGCGGCGGCTGAGAGAAGGAGGAGTGAGGAGTCGGTTA
AGGGTGAGTTGAGGAGGAAGGCCATGGAGGCTCTTCAGAAGCTTGAGAAGGGTGAAAGAGTTAGCCTTGATGAGTTAATG
GGACTGGAGGACTCAGATGACCAGCAGAGTGAGTGA

Upstream 100 bases:

>100_bases
TAAGGTGGGGCAATGAGGTAGAAACCCCCAACTCCCTAAGGGTGGGGTGGTTTACTTTCTCTTGGATAAAGCTTATATAT
TGGGTTGTTAAGGGTTGCTT

Downstream 100 bases:

>100_bases
CTCTGAACCCATAGAGGTCTCCATTAGGCTTAGGTTAAGTGAGGATAATGAGGTTGTTTACAGGGTTTTTAAGGTAATGG
AACCTGAATTCAAGTTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSLLNVEELEKKIEELNVKLNDVNGELDKTYKELNELKGKLNEKRSQLTAVINQLNSKRAELSELKNKINELISKRNNLI
EYLKKNKAEKDEVSKRIIQLRDRVRNLRELLKELEASGGRVQDKDKLRVLIERLEFEHDTSPSDLKKEMEFYKTITELEK
NLEKAETLDELRNHIANTVKEIEELSRRRTELVNSLKSTYEGSYKPLKDELMGLRSKVNEIRNSIGELKKRRDELKAERD
EIKKQMLGLYARIKELKETKRQIIDEINKNRLLLVAARKSAAAAERRRSEESVKGELRRKAMEALQKLEKGERVSLDELM
GLEDSDDQQSE

Sequences:

>Translated_331_residues
MSLLNVEELEKKIEELNVKLNDVNGELDKTYKELNELKGKLNEKRSQLTAVINQLNSKRAELSELKNKINELISKRNNLI
EYLKKNKAEKDEVSKRIIQLRDRVRNLRELLKELEASGGRVQDKDKLRVLIERLEFEHDTSPSDLKKEMEFYKTITELEK
NLEKAETLDELRNHIANTVKEIEELSRRRTELVNSLKSTYEGSYKPLKDELMGLRSKVNEIRNSIGELKKRRDELKAERD
EIKKQMLGLYARIKELKETKRQIIDEINKNRLLLVAARKSAAAAERRRSEESVKGELRRKAMEALQKLEKGERVSLDELM
GLEDSDDQQSE
>Mature_330_residues
SLLNVEELEKKIEELNVKLNDVNGELDKTYKELNELKGKLNEKRSQLTAVINQLNSKRAELSELKNKINELISKRNNLIE
YLKKNKAEKDEVSKRIIQLRDRVRNLRELLKELEASGGRVQDKDKLRVLIERLEFEHDTSPSDLKKEMEFYKTITELEKN
LEKAETLDELRNHIANTVKEIEELSRRRTELVNSLKSTYEGSYKPLKDELMGLRSKVNEIRNSIGELKKRRDELKAERDE
IKKQMLGLYARIKELKETKRQIIDEINKNRLLLVAARKSAAAAERRRSEESVKGELRRKAMEALQKLEKGERVSLDELMG
LEDSDDQQSE

Specific function: Unknown

COG id: COG1340

COG function: function code S; Uncharacterized archaeal coiled-coil protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38781; Mature: 38650

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLNVEELEKKIEELNVKLNDVNGELDKTYKELNELKGKLNEKRSQLTAVINQLNSKRA
CCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELSELKNKINELISKRNNLIEYLKKNKAEKDEVSKRIIQLRDRVRNLRELLKELEASGGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQDKDKLRVLIERLEFEHDTSPSDLKKEMEFYKTITELEKNLEKAETLDELRNHIANTVK
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEELSRRRTELVNSLKSTYEGSYKPLKDELMGLRSKVNEIRNSIGELKKRRDELKAERD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIKKQMLGLYARIKELKETKRQIIDEINKNRLLLVAARKSAAAAERRRSEESVKGELRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
AMEALQKLEKGERVSLDELMGLEDSDDQQSE
HHHHHHHHHCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLLNVEELEKKIEELNVKLNDVNGELDKTYKELNELKGKLNEKRSQLTAVINQLNSKRA
CCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELSELKNKINELISKRNNLIEYLKKNKAEKDEVSKRIIQLRDRVRNLRELLKELEASGGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VQDKDKLRVLIERLEFEHDTSPSDLKKEMEFYKTITELEKNLEKAETLDELRNHIANTVK
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEELSRRRTELVNSLKSTYEGSYKPLKDELMGLRSKVNEIRNSIGELKKRRDELKAERD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIKKQMLGLYARIKELKETKRQIIDEINKNRLLLVAARKSAAAAERRRSEESVKGELRRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
AMEALQKLEKGERVSLDELMGLEDSDDQQSE
HHHHHHHHHCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA