| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is thiE
Identifier: 159040653
GI number: 159040653
Start: 75444
End: 76061
Strand: Reverse
Name: thiE
Synonym: Cmaq_0061
Alternate gene names: 159040653
Gene position: 76061-75444 (Counterclockwise)
Preceding gene: 159040654
Following gene: 159040649
Centisome position: 3.66
GC content: 47.25
Gene sequence:
>618_bases GTGAGATTACCTAAGGGCATATACGGTATAACTGATGACTCATATAATGTTAAGAACCATGTGGATGCAGCCAAGGTGTT CCTAGAGGGGGGTGTGAGGATAATTCAGTATAGGCGTAAGGAGGGTAGCATAAGGCAGATGCTTAATGAGGCTAAGGAGA TTAGGAAACTGTGTAATCAATATGGAGCAGTAATGATAGTTGATGATAGGGTTGACATAGCGGTACTCTCTGATGCTGAC GGCGTCCACGTGGGTTTGGAGGATGCACCAGTGGATGAGGTTAAGAGGAGGTTTAGTGGAATTATAATCGGGGCAAGCGC AAGCACTGTTGATGAGGCTAAGGAGGGGGAGAAGGCTGGTGCAGATTACTTAGGTGCAGGCTCCATATTCCCAAGCCCCA CTAAACCGGACTACAGGATACTTGGACTTGAGGGATTAAGAAGAGTCGTCCAATCCGTTAGTATACCGGTATACGCAATA GGTGGTGTAACCTTAGAATCCATACCAGCCATAAAGGCCACTGGGGCTTGGGGTGCCGCAGTGATTTCAGGAATATTAGC GGCAAAGGATCCCTTGGAAATGGCTAAGAGGTTTGTTAAGGCTTGGGATGAGGCTTAA
Upstream 100 bases:
>100_bases AGAGTAAGGCACCTGGTACATTTAAACAGTACCTAATTGATGAGTTATTTAACCTAACCGGTGACGATTACGTTAAAATG GCTAAGGTAGAGGTGGTTCA
Downstream 100 bases:
>100_bases TGACTCCATTACCCAATGCTTAGAAGTGGTGATCCTCATTTAATTCACCTGACTTGAGGGATAAGGTCTTAACTACCTAG ATTTTAAGTAAAATTAACTA
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MRLPKGIYGITDDSYNVKNHVDAAKVFLEGGVRIIQYRRKEGSIRQMLNEAKEIRKLCNQYGAVMIVDDRVDIAVLSDAD GVHVGLEDAPVDEVKRRFSGIIIGASASTVDEAKEGEKAGADYLGAGSIFPSPTKPDYRILGLEGLRRVVQSVSIPVYAI GGVTLESIPAIKATGAWGAAVISGILAAKDPLEMAKRFVKAWDEA
Sequences:
>Translated_205_residues MRLPKGIYGITDDSYNVKNHVDAAKVFLEGGVRIIQYRRKEGSIRQMLNEAKEIRKLCNQYGAVMIVDDRVDIAVLSDAD GVHVGLEDAPVDEVKRRFSGIIIGASASTVDEAKEGEKAGADYLGAGSIFPSPTKPDYRILGLEGLRRVVQSVSIPVYAI GGVTLESIPAIKATGAWGAAVISGILAAKDPLEMAKRFVKAWDEA >Mature_205_residues MRLPKGIYGITDDSYNVKNHVDAAKVFLEGGVRIIQYRRKEGSIRQMLNEAKEIRKLCNQYGAVMIVDDRVDIAVLSDAD GVHVGLEDAPVDEVKRRFSGIIIGASASTVDEAKEGEKAGADYLGAGSIFPSPTKPDYRILGLEGLRRVVQSVSIPVYAI GGVTLESIPAIKATGAWGAAVISGILAAKDPLEMAKRFVKAWDEA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=183, Percent_Identity=31.6939890710383, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325042, Length=191, Percent_Identity=30.3664921465969, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_CALMQ (A8M9N4)
Other databases:
- EMBL: CP000852 - RefSeq: YP_001539905.1 - ProteinModelPortal: A8M9N4 - SMR: A8M9N4 - GeneID: 5710154 - GenomeReviews: CP000852_GR - KEGG: cma:Cmaq_0061 - HOGENOM: HBG754477 - OMA: QEHIDKT - BioCyc: CMAQ397948:CMAQ_0061-MONOMER - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 22058; Mature: 22058
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPKGIYGITDDSYNVKNHVDAAKVFLEGGVRIIQYRRKEGSIRQMLNEAKEIRKLCNQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHH YGAVMIVDDRVDIAVLSDADGVHVGLEDAPVDEVKRRFSGIIIGASASTVDEAKEGEKAG CCCEEEEECCCCEEEEECCCCEEECCCCCCHHHHHHHHCCEEEECCCCHHHHHHCCHHCC ADYLGAGSIFPSPTKPDYRILGLEGLRRVVQSVSIPVYAIGGVTLESIPAIKATGAWGAA CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCEEEECCEEHHHCCCEEECCCHHHH VISGILAAKDPLEMAKRFVKAWDEA HHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRLPKGIYGITDDSYNVKNHVDAAKVFLEGGVRIIQYRRKEGSIRQMLNEAKEIRKLCNQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHH YGAVMIVDDRVDIAVLSDADGVHVGLEDAPVDEVKRRFSGIIIGASASTVDEAKEGEKAG CCCEEEEECCCCEEEEECCCCEEECCCCCCHHHHHHHHCCEEEECCCCHHHHHHCCHHCC ADYLGAGSIFPSPTKPDYRILGLEGLRRVVQSVSIPVYAIGGVTLESIPAIKATGAWGAA CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCEEEECCEEHHHCCCEEECCCHHHH VISGILAAKDPLEMAKRFVKAWDEA HHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA