| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040649
Identifier: 159040649
GI number: 159040649
Start: 72641
End: 73630
Strand: Reverse
Name: 159040649
Synonym: Cmaq_0057
Alternate gene names: NA
Gene position: 73630-72641 (Counterclockwise)
Preceding gene: 159040653
Following gene: 159040645
Centisome position: 3.54
GC content: 43.64
Gene sequence:
>990_bases GTGCTTAATGCGGTTAATGATAACATTTACTCAATACTTGTTGGAGTACAGAGGTTTAGCCTACTTTACGCGACCTTATA TATACCATTAGCCTTCAGGGAATCAACATACCTATGGGTTTCATTGAGCTATGCGTCATTAGCCATTGGCGGCTTCATAG GCTACTTATTTGGATTCAAGAAATGGTTCATAATACCCACGATTATATTATCAGTATTAACCATACCGTTTAAACAGGCA CTATTACCATTACTTGCCTTCCTGGGTGCACTTCACTCAGTAATAGTGCCGAATGCCTACTCGCTCTTCGGTAATCGTGG TGTTGCTAAATCCTACACGGCATCATCAGTGGCCTACCTGGTGTCGGGTCTAGTTATCTACTTCACGAAGACCCCAATAC CACTACTGGTGACAGCATTGTTAACCCTACTCCCACCAATTAACCGTGAGGCTAAGGAGGTTACTAGATACATGGTTAAG TTCGTAGTTAACCTAGACTTCTTAAGTGTTATACCGTATACAATAGTCACGTTCATAGTGGGTGGGTTATACACCGTCTA CTTATCAACGATACCGAGCTTCGGTGACTACGGGAGACTGATCCTGGCATTATCCGCTGGTTTAATGGGTGTACTTAGGT GGGTTTCAGACAGATACGTTGATAACGCGTTATGGGTTAGCGTAGCTTTAACCGGTGTAGCCTTCGTGGTTTACACTATT TACCCAAGTATAGTAACTGCATTAATCTTCATTGCACCCTACTCCCTAGTCTACCCATTAGTAACTATGACTGCTGGAAG GGGAAGTAAGGACCCTGTCACCAGTATTAATGCTGCCTTTGCAGGTACCTCAACAGGGGAGTCAATTATGCCATTCTTCT TCCACTACAATAAGTACCTTGTCCTAGCCCTCTCCGCAATACTGGTTCTTCTACCTTTATCCACTAGGCTACAGCGGGAG GGGAGGAGGTTAAGTATTATGGCTAAATAA
Upstream 100 bases:
>100_bases TAGGAATATTTTCCACATAGGCGTTAACTTAAATAATCCAGCTTCACTCAAATTAACCTAAAGTGAGTTACACACTTAAA GGGTGGTGTTAATCAGCAAT
Downstream 100 bases:
>100_bases TCTCCAGTAAATCCCTATCGCGCACAATCTCATGAACCACAGTGTACTCGCTTGGTGTACCTATACTGAACCAGGTCTTC GGCCCCACTTCCATAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MLNAVNDNIYSILVGVQRFSLLYATLYIPLAFRESTYLWVSLSYASLAIGGFIGYLFGFKKWFIIPTIILSVLTIPFKQA LLPLLAFLGALHSVIVPNAYSLFGNRGVAKSYTASSVAYLVSGLVIYFTKTPIPLLVTALLTLLPPINREAKEVTRYMVK FVVNLDFLSVIPYTIVTFIVGGLYTVYLSTIPSFGDYGRLILALSAGLMGVLRWVSDRYVDNALWVSVALTGVAFVVYTI YPSIVTALIFIAPYSLVYPLVTMTAGRGSKDPVTSINAAFAGTSTGESIMPFFFHYNKYLVLALSAILVLLPLSTRLQRE GRRLSIMAK
Sequences:
>Translated_329_residues MLNAVNDNIYSILVGVQRFSLLYATLYIPLAFRESTYLWVSLSYASLAIGGFIGYLFGFKKWFIIPTIILSVLTIPFKQA LLPLLAFLGALHSVIVPNAYSLFGNRGVAKSYTASSVAYLVSGLVIYFTKTPIPLLVTALLTLLPPINREAKEVTRYMVK FVVNLDFLSVIPYTIVTFIVGGLYTVYLSTIPSFGDYGRLILALSAGLMGVLRWVSDRYVDNALWVSVALTGVAFVVYTI YPSIVTALIFIAPYSLVYPLVTMTAGRGSKDPVTSINAAFAGTSTGESIMPFFFHYNKYLVLALSAILVLLPLSTRLQRE GRRLSIMAK >Mature_329_residues MLNAVNDNIYSILVGVQRFSLLYATLYIPLAFRESTYLWVSLSYASLAIGGFIGYLFGFKKWFIIPTIILSVLTIPFKQA LLPLLAFLGALHSVIVPNAYSLFGNRGVAKSYTASSVAYLVSGLVIYFTKTPIPLLVTALLTLLPPINREAKEVTRYMVK FVVNLDFLSVIPYTIVTFIVGGLYTVYLSTIPSFGDYGRLILALSAGLMGVLRWVSDRYVDNALWVSVALTGVAFVVYTI YPSIVTALIFIAPYSLVYPLVTMTAGRGSKDPVTSINAAFAGTSTGESIMPFFFHYNKYLVLALSAILVLLPLSTRLQRE GRRLSIMAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36219; Mature: 36219
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNAVNDNIYSILVGVQRFSLLYATLYIPLAFRESTYLWVSLSYASLAIGGFIGYLFGFK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHH KWFIIPTIILSVLTIPFKQALLPLLAFLGALHSVIVPNAYSLFGNRGVAKSYTASSVAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHH VSGLVIYFTKTPIPLLVTALLTLLPPINREAKEVTRYMVKFVVNLDFLSVIPYTIVTFIV HHHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLYTVYLSTIPSFGDYGRLILALSAGLMGVLRWVSDRYVDNALWVSVALTGVAFVVYTI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPSIVTALIFIAPYSLVYPLVTMTAGRGSKDPVTSINAAFAGTSTGESIMPFFFHYNKYL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH VLALSAILVLLPLSTRLQREGRRLSIMAK HHHHHHHHHHHCCHHHHHHCCCEEEEEEC >Mature Secondary Structure MLNAVNDNIYSILVGVQRFSLLYATLYIPLAFRESTYLWVSLSYASLAIGGFIGYLFGFK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHH KWFIIPTIILSVLTIPFKQALLPLLAFLGALHSVIVPNAYSLFGNRGVAKSYTASSVAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHH VSGLVIYFTKTPIPLLVTALLTLLPPINREAKEVTRYMVKFVVNLDFLSVIPYTIVTFIV HHHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLYTVYLSTIPSFGDYGRLILALSAGLMGVLRWVSDRYVDNALWVSVALTGVAFVVYTI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPSIVTALIFIAPYSLVYPLVTMTAGRGSKDPVTSINAAFAGTSTGESIMPFFFHYNKYL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH VLALSAILVLLPLSTRLQREGRRLSIMAK HHHHHHHHHHHCCHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA