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The map label for this gene is ynaI [C]

Identifier: 158425588

GI number: 158425588

Start: 4529865

End: 4531286

Strand: Reverse

Name: ynaI [C]

Synonym: AZC_3964

Alternate gene names: 158425588

Gene position: 4531286-4529865 (Counterclockwise)

Preceding gene: 158425589

Following gene: 158425587

Centisome position: 84.39

GC content: 70.32

Gene sequence:

>1422_bases
ATGCTCAGCGCGCAGATCGCCCAAGAGGTGCCGTGGACGATCCTGATCGTCCTCGGCTTTCCGCTCCTCACGGTTCTTCT
CATCGAGCTGACGCGGCGTTTCGCCGGGCCGGACTCGGCGGCGCGCCGGCCGATCAAGGCACTGCAGATGATCGTGGTGC
CGGCAGGCGCCGTCTGGATCATCGTCCACGAACTGCTGCACTTGCCGCCCGAGGGCCTGACGGTGAAGATCGTGGACACG
GCGGTGGGCATCCTGCTGCTGCACGCCGTCTTCACCATCCTCCAGAGCCTCATCATCGCCTTCAGCGAGACCGTGGGGCG
CCTGCCGGCACCGCGCCTGTTCTATGAGCTCGGCTCGTCCGCGGTGGTGGCCATCGGCGCGGCCATCATCGTGTCCACCA
TCTGGGACGTGGACCTCGGCAGCCTGCTCGGGGCGCTCGGCATCGGCTCGGTGGTGCTGGGCCTCGCGCTTCAGAACGTC
ATCGGCGGGCTCGTGGCGGGCGTGATCGTCTTCTCCGGCCGCCACTTCAATCTCGGCGATTGGCTGCAGATCGACGGCAC
GCCGGCCAAGGTGGTGCAGATCGACTGGCGGGCCATCACGGTGGAGACCCTCTCCGGGGAGCGCATCGTGGTGCCGAGCG
CCAACATGTCCAGCGCTTCGCTTCGCATCACCCGCGCCCGGCAGTCGGTGTCGGTCGCAACCGACGTGTCCCTGCCGCCC
GGCACCGCGCCGGCGGAAGCCAAGGCCCTCCTGCTGGAGGCGGCACGGGACGTGCCGCAATTGCTCGACGCCAATGCCGT
TGCCTGCCGCGTCAAGCAACTGGGCGGCACGGCCATCGTCTATGGCGTGTCCTTCCCGGTGGCCGATGCCAGCCAGGTGG
TGAAGGCGCGCGACGCCTTCCTGCACCGGCTCTGGTACGTCGGCCAGCGCCACGGCGTCTCCGTGGCCGAGGGCGTGAGC
GCGGAAGAGCTTTATGGCACCGACACCCCGCAGACCCGTCTTGCGGCGCTCGCCGGCACCGGCGCTTTCGGTGCGGTGAG
CGACGACCTGCGTGTCGTGGCGGTGGACGCGCGCCTGCGCCTCTATGCGGCGGGCGAGATCATCCTGCGGGCGGGGGAGG
CGGCCCCCTATTTCCTGGTGCTGCTGTCCGGCGCGGCGCGGGTGAGCCTGCCGGCCGGCGGGGTGGTGGAGCGCCTCGCG
GATGGCGCGCTCTATGCCACCCGTGATGCCTTCCGCGGCACGCCCTCGTCCGTGGAGGTTCTCGCGGAGAGCGAGGTTCA
TCTGCTGGAAGTGCCGGTGACCGCCATGGAGCGCCTGCTGGAGCGCCACCCGGCGCTGGCCCAGAGGGTGGACATGATCG
TCGAGGCGCGCACCGCCGCGCTCGCCGACTCGCTGGCAGGCAACGGCGGCGCGGCCGCTTAA

Upstream 100 bases:

>100_bases
GAGCCCAAGGCGGAGATCACGCTGTTCGATGACACGCCGGTCGCCACGTGGCAGCGCCCGGCCGCGCCTGCGCCCGCCGC
CGAGAGCCGGTGAGGCGGCG

Downstream 100 bases:

>100_bases
GACTCTCTTCACCAGCTTCGCAGGCCGAAGCGGAGCGGCGACACTTCCTTTGCCTTTGGAAGCCTTACTCGCTGCAAGGC
GGGACGACCCCCTCCCGTCC

Product: integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MLSAQIAQEVPWTILIVLGFPLLTVLLIELTRRFAGPDSAARRPIKALQMIVVPAGAVWIIVHELLHLPPEGLTVKIVDT
AVGILLLHAVFTILQSLIIAFSETVGRLPAPRLFYELGSSAVVAIGAAIIVSTIWDVDLGSLLGALGIGSVVLGLALQNV
IGGLVAGVIVFSGRHFNLGDWLQIDGTPAKVVQIDWRAITVETLSGERIVVPSANMSSASLRITRARQSVSVATDVSLPP
GTAPAEAKALLLEAARDVPQLLDANAVACRVKQLGGTAIVYGVSFPVADASQVVKARDAFLHRLWYVGQRHGVSVAEGVS
AEELYGTDTPQTRLAALAGTGAFGAVSDDLRVVAVDARLRLYAAGEIILRAGEAAPYFLVLLSGAARVSLPAGGVVERLA
DGALYATRDAFRGTPSSVEVLAESEVHLLEVPVTAMERLLERHPALAQRVDMIVEARTAALADSLAGNGGAAA

Sequences:

>Translated_473_residues
MLSAQIAQEVPWTILIVLGFPLLTVLLIELTRRFAGPDSAARRPIKALQMIVVPAGAVWIIVHELLHLPPEGLTVKIVDT
AVGILLLHAVFTILQSLIIAFSETVGRLPAPRLFYELGSSAVVAIGAAIIVSTIWDVDLGSLLGALGIGSVVLGLALQNV
IGGLVAGVIVFSGRHFNLGDWLQIDGTPAKVVQIDWRAITVETLSGERIVVPSANMSSASLRITRARQSVSVATDVSLPP
GTAPAEAKALLLEAARDVPQLLDANAVACRVKQLGGTAIVYGVSFPVADASQVVKARDAFLHRLWYVGQRHGVSVAEGVS
AEELYGTDTPQTRLAALAGTGAFGAVSDDLRVVAVDARLRLYAAGEIILRAGEAAPYFLVLLSGAARVSLPAGGVVERLA
DGALYATRDAFRGTPSSVEVLAESEVHLLEVPVTAMERLLERHPALAQRVDMIVEARTAALADSLAGNGGAAA
>Mature_473_residues
MLSAQIAQEVPWTILIVLGFPLLTVLLIELTRRFAGPDSAARRPIKALQMIVVPAGAVWIIVHELLHLPPEGLTVKIVDT
AVGILLLHAVFTILQSLIIAFSETVGRLPAPRLFYELGSSAVVAIGAAIIVSTIWDVDLGSLLGALGIGSVVLGLALQNV
IGGLVAGVIVFSGRHFNLGDWLQIDGTPAKVVQIDWRAITVETLSGERIVVPSANMSSASLRITRARQSVSVATDVSLPP
GTAPAEAKALLLEAARDVPQLLDANAVACRVKQLGGTAIVYGVSFPVADASQVVKARDAFLHRLWYVGQRHGVSVAEGVS
AEELYGTDTPQTRLAALAGTGAFGAVSDDLRVVAVDARLRLYAAGEIILRAGEAAPYFLVLLSGAARVSLPAGGVVERLA
DGALYATRDAFRGTPSSVEVLAESEVHLLEVPVTAMERLLERHPALAQRVDMIVEARTAALADSLAGNGGAAA

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49496; Mature: 49496

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50042 CNMP_BINDING_3 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAQIAQEVPWTILIVLGFPLLTVLLIELTRRFAGPDSAARRPIKALQMIVVPAGAVWI
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHCCCCHHHH
IVHELLHLPPEGLTVKIVDTAVGILLLHAVFTILQSLIIAFSETVGRLPAPRLFYELGSS
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
AVVAIGAAIIVSTIWDVDLGSLLGALGIGSVVLGLALQNVIGGLVAGVIVFSGRHFNLGD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
WLQIDGTPAKVVQIDWRAITVETLSGERIVVPSANMSSASLRITRARQSVSVATDVSLPP
EEEECCCCEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEHHHHEEEEEECCCCC
GTAPAEAKALLLEAARDVPQLLDANAVACRVKQLGGTAIVYGVSFPVADASQVVKARDAF
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH
LHRLWYVGQRHGVSVAEGVSAEELYGTDTPQTRLAALAGTGAFGAVSDDLRVVAVDARLR
HHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECEEE
LYAAGEIILRAGEAAPYFLVLLSGAARVSLPAGGVVERLADGALYATRDAFRGTPSSVEV
EEEECEEEEEECCCCCEEEEEECCCCEEECCCCHHHHHHHCCCCEEEHHHHCCCCCHHHH
LAESEVHLLEVPVTAMERLLERHPALAQRVDMIVEARTAALADSLAGNGGAAA
EECCCEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSAQIAQEVPWTILIVLGFPLLTVLLIELTRRFAGPDSAARRPIKALQMIVVPAGAVWI
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHCCCCHHHH
IVHELLHLPPEGLTVKIVDTAVGILLLHAVFTILQSLIIAFSETVGRLPAPRLFYELGSS
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
AVVAIGAAIIVSTIWDVDLGSLLGALGIGSVVLGLALQNVIGGLVAGVIVFSGRHFNLGD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
WLQIDGTPAKVVQIDWRAITVETLSGERIVVPSANMSSASLRITRARQSVSVATDVSLPP
EEEECCCCEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEHHHHEEEEEECCCCC
GTAPAEAKALLLEAARDVPQLLDANAVACRVKQLGGTAIVYGVSFPVADASQVVKARDAF
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH
LHRLWYVGQRHGVSVAEGVSAEELYGTDTPQTRLAALAGTGAFGAVSDDLRVVAVDARLR
HHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECEEE
LYAAGEIILRAGEAAPYFLVLLSGAARVSLPAGGVVERLADGALYATRDAFRGTPSSVEV
EEEECEEEEEECCCCCEEEEEECCCCEEECCCCHHHHHHHCCCCEEEHHHHCCCCCHHHH
LAESEVHLLEVPVTAMERLLERHPALAQRVDMIVEARTAALADSLAGNGGAAA
EECCCEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA