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The map label for this gene is omp31 [H]

Identifier: 158425587

GI number: 158425587

Start: 4529139

End: 4529747

Strand: Reverse

Name: omp31 [H]

Synonym: AZC_3963

Alternate gene names: 158425587

Gene position: 4529747-4529139 (Counterclockwise)

Preceding gene: 158425588

Following gene: 158425586

Centisome position: 84.36

GC content: 64.04

Gene sequence:

>609_bases
ATGAAGACCCGCATCATCGCGGCCTTGGCCGCGACGCTGGCGGCGAGCCCCGTGGCGGCAGCCGATCTCAGCTACGGCAA
CAGCTATGGCTATGCACCGGCGGCGGCCGCGCCTGCCTCCTGGACCGGATTCTACGTCGGCGGAAACATCGGCTACGGCT
GGGGCTCGGCGGGCGCCGATTCCCCGAAGGGATTCCTGGGCGGCCTGCAGGCCGGCTACAATCTTCAGATGGCCGGATCG
CCCATCGTGCTCGGTCTCGAGACCGACTTCGACTGGGCCGGCATGAACGACGGCAATTACAGCCAAGACTATATCGGCAC
GGTGCGGGCCCGCGCGGGCTTCGCCTTCGACCGCGTCCTCATCTACGGCACCGCCGGCTTCGCCTATGGCAAGGGCTCCT
ACCAGGTGTTCGGTCTCAGCAACAGCCAGACCTCCTACGGCTGGGCTCTGGGTGCCGGTGCGGAATATGCAATCGACCGC
AATTGGAGCGCGCGTGCAGAATATATGTACGTCGATCTAGGCAACTCGACCTATGGCACCTGGGTCGGCCCCACCAACGT
GAGCTATGACACAAGCGTTCTTCGCGCAGGTGTGAACTATCGTTTCTAG

Upstream 100 bases:

>100_bases
TCGCAGGCCGAAGCGGAGCGGCGACACTTCCTTTGCCTTTGGAAGCCTTACTCGCTGCAAGGCGGGACGACCCCCTCCCG
TCCGCAATGAGGAGAGTTCC

Downstream 100 bases:

>100_bases
TCTCTTAACGTCAGTCGACGCCGCGGAAATCTTGAAAACAGAAGGCTTTTTTCGTGGCGTCGGCTGCAATTGTGTCGCGA
TCTGGAACCCCTGCCGCAAT

Product: outer-membrane immunogenic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKTRIIAALAATLAASPVAAADLSYGNSYGYAPAAAAPASWTGFYVGGNIGYGWGSAGADSPKGFLGGLQAGYNLQMAGS
PIVLGLETDFDWAGMNDGNYSQDYIGTVRARAGFAFDRVLIYGTAGFAYGKGSYQVFGLSNSQTSYGWALGAGAEYAIDR
NWSARAEYMYVDLGNSTYGTWVGPTNVSYDTSVLRAGVNYRF

Sequences:

>Translated_202_residues
MKTRIIAALAATLAASPVAAADLSYGNSYGYAPAAAAPASWTGFYVGGNIGYGWGSAGADSPKGFLGGLQAGYNLQMAGS
PIVLGLETDFDWAGMNDGNYSQDYIGTVRARAGFAFDRVLIYGTAGFAYGKGSYQVFGLSNSQTSYGWALGAGAEYAIDR
NWSARAEYMYVDLGNSTYGTWVGPTNVSYDTSVLRAGVNYRF
>Mature_202_residues
MKTRIIAALAATLAASPVAAADLSYGNSYGYAPAAAAPASWTGFYVGGNIGYGWGSAGADSPKGFLGGLQAGYNLQMAGS
PIVLGLETDFDWAGMNDGNYSQDYIGTVRARAGFAFDRVLIYGTAGFAYGKGSYQVFGLSNSQTSYGWALGAGAEYAIDR
NWSARAEYMYVDLGNSTYGTWVGPTNVSYDTSVLRAGVNYRF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 21214; Mature: 21214

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRIIAALAATLAASPVAAADLSYGNSYGYAPAAAAPASWTGFYVGGNIGYGWGSAGAD
CCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
SPKGFLGGLQAGYNLQMAGSPIVLGLETDFDWAGMNDGNYSQDYIGTVRARAGFAFDRVL
CCCHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHEEEHHHCCCEEEEEE
IYGTAGFAYGKGSYQVFGLSNSQTSYGWALGAGAEYAIDRNWSARAEYMYVDLGNSTYGT
EEECCCEEECCCCEEEEEECCCCCCCCEEECCCCEEEECCCCCCCEEEEEEECCCCCCEE
WVGPTNVSYDTSVLRAGVNYRF
EECCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKTRIIAALAATLAASPVAAADLSYGNSYGYAPAAAAPASWTGFYVGGNIGYGWGSAGAD
CCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
SPKGFLGGLQAGYNLQMAGSPIVLGLETDFDWAGMNDGNYSQDYIGTVRARAGFAFDRVL
CCCHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHEEEHHHCCCEEEEEE
IYGTAGFAYGKGSYQVFGLSNSQTSYGWALGAGAEYAIDRNWSARAEYMYVDLGNSTYGT
EEECCCEEECCCCEEEEEECCCCCCCCEEECCCCEEEECCCCCCCEEEEEEECCCCCCEE
WVGPTNVSYDTSVLRAGVNYRF
EECCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]