| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158425359
Identifier: 158425359
GI number: 158425359
Start: 4287077
End: 4287853
Strand: Reverse
Name: 158425359
Synonym: AZC_3735
Alternate gene names: NA
Gene position: 4287853-4287077 (Counterclockwise)
Preceding gene: 158425362
Following gene: 158425355
Centisome position: 79.85
GC content: 72.07
Gene sequence:
>777_bases ATGGGGCAGGATGGGGGCCTGCAGCCGGCGGCCATGGTGCAGGGGCTCGACGGCTGCCGGGAGGGATGGATCCTCGCGCG CTGGGTGCCGGGCGGCGCCTTGAACCTGTTGCGGATCTCCGATCTGACCGAAGCCTTTCCGGCCGGCACGCCGCCGCTCG TCTCGGCCATCGACATCCCCATCGGCCTGCCGGATCGGGTCGGCGCAGGCGGGCGGGGGCCGGACCGGGCGGTGCGCCCG CTGCTCGGTCAGCGCCAGTCCAGTGTCTTTTCCGTGCCCTCCCGCCGGGCGGTGGAGACCGCCTGCGACATATCCATTCC CGAGGAGGCGCGCTATCGCGCCGCCTGTGCAGCCGCGCTCGAAACCTCGGACCCGCCGCGCAAGATCTCCCGCCAGTCCT TCGCGCTCTTCCCGAAGGTGCTCGATGTGGACCACGTGCTGCGGGCGCGGCCGGGCCTGCCGCTCACCGAATGCCATCCG GAAGTGAGCTTCTGGGCCATGAACGGCCAGAAGCCCCTCGATCTGCCGAAGAAGGTGAAGGGCACGCCCGCGGCACCCGG CCTTGACCTGCGCATTCGCCTTCTGGCTGCCGAAGGCGTCCCGGTGGACCAACTGACGCGGGAGCGGGCGCGCGCCCTGC GGGCGGGGCTCGATGATCTGGTGGACGCCTGTGCCTGCGCCTGGACAGCGGCTCGCATCGCCCGCGGGGCGGCGCTGGTC TTTCCCGATCCGCCCGAGCGCGACCGCTATGGCTTGCCGGTGGCCATCACCGCGTGA
Upstream 100 bases:
>100_bases GCGCCACAGGCGCTTGCACCTCTCTCCCCCACCGCTAGCCTAGCCAAAGCGGGCGGGGCCTGTCACGACCCCGCAGCGCG ATGCCGCAAGGGGGCGGATC
Downstream 100 bases:
>100_bases GCGGGCTCAGTGGCCGACGCCCCGCTTCACGTTCAGCCGCTCGCGCTCGGCGTCGAGGCGCTCGATGATGAGCTTGGCGA CCAGCGTGACGAGGGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Nudix Hydrolase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MGQDGGLQPAAMVQGLDGCREGWILARWVPGGALNLLRISDLTEAFPAGTPPLVSAIDIPIGLPDRVGAGGRGPDRAVRP LLGQRQSSVFSVPSRRAVETACDISIPEEARYRAACAAALETSDPPRKISRQSFALFPKVLDVDHVLRARPGLPLTECHP EVSFWAMNGQKPLDLPKKVKGTPAAPGLDLRIRLLAAEGVPVDQLTRERARALRAGLDDLVDACACAWTAARIARGAALV FPDPPERDRYGLPVAITA
Sequences:
>Translated_258_residues MGQDGGLQPAAMVQGLDGCREGWILARWVPGGALNLLRISDLTEAFPAGTPPLVSAIDIPIGLPDRVGAGGRGPDRAVRP LLGQRQSSVFSVPSRRAVETACDISIPEEARYRAACAAALETSDPPRKISRQSFALFPKVLDVDHVLRARPGLPLTECHP EVSFWAMNGQKPLDLPKKVKGTPAAPGLDLRIRLLAAEGVPVDQLTRERARALRAGLDDLVDACACAWTAARIARGAALV FPDPPERDRYGLPVAITA >Mature_257_residues GQDGGLQPAAMVQGLDGCREGWILARWVPGGALNLLRISDLTEAFPAGTPPLVSAIDIPIGLPDRVGAGGRGPDRAVRPL LGQRQSSVFSVPSRRAVETACDISIPEEARYRAACAAALETSDPPRKISRQSFALFPKVLDVDHVLRARPGLPLTECHPE VSFWAMNGQKPLDLPKKVKGTPAAPGLDLRIRLLAAEGVPVDQLTRERARALRAGLDDLVDACACAWTAARIARGAALVF PDPPERDRYGLPVAITA
Specific function: Unknown
COG id: COG4923
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27480; Mature: 27349
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQDGGLQPAAMVQGLDGCREGWILARWVPGGALNLLRISDLTEAFPAGTPPLVSAIDIP CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCCHHHHEECC IGLPDRVGAGGRGPDRAVRPLLGQRQSSVFSVPSRRAVETACDISIPEEARYRAACAAAL CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH ETSDPPRKISRQSFALFPKVLDVDHVLRARPGLPLTECHPEVSFWAMNGQKPLDLPKKVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCCCCCCCHHCC GTPAAPGLDLRIRLLAAEGVPVDQLTRERARALRAGLDDLVDACACAWTAARIARGAALV CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEE FPDPPERDRYGLPVAITA CCCCCCCCCCCCCEEEEC >Mature Secondary Structure GQDGGLQPAAMVQGLDGCREGWILARWVPGGALNLLRISDLTEAFPAGTPPLVSAIDIP CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCCHHHHEECC IGLPDRVGAGGRGPDRAVRPLLGQRQSSVFSVPSRRAVETACDISIPEEARYRAACAAAL CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH ETSDPPRKISRQSFALFPKVLDVDHVLRARPGLPLTECHPEVSFWAMNGQKPLDLPKKVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCCCCCCCHHCC GTPAAPGLDLRIRLLAAEGVPVDQLTRERARALRAGLDDLVDACACAWTAARIARGAALV CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEE FPDPPERDRYGLPVAITA CCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA