Click here to switch to the map view.

The map label for this gene is ydfM [H]

Identifier: 158425362

GI number: 158425362

Start: 4289246

End: 4290199

Strand: Reverse

Name: ydfM [H]

Synonym: AZC_3738

Alternate gene names: 158425362

Gene position: 4290199-4289246 (Counterclockwise)

Preceding gene: 158425365

Following gene: 158425359

Centisome position: 79.9

GC content: 65.83

Gene sequence:

>954_bases
ATGGACGGATTGGCCTCCCACGGCCGCGCAGCGAGAAGAGGGCCTACGTCCGTGTCGGGTTCAGCCAGCCAGAAACTGTC
CTTCCAGGCGATGGTCTTTGTCGCCTGCCTGTTTCCCTTCTACATCCTTGCGGCGACGCTCACCAATTCGGCGGCGGTGC
TCACGGATCTTCTGGCGACGTCCTTCGATCTCACCTCGCTCACCACCTGCTGGCTGGTGCTGAAGATCGCGCACGGGCGG
GAGAAGGGCCGATTCGCTTATGGCCTCGGCAAGCTGGAAAACCTCGCCGAACTGATGATCGCCGTGCTCCAGGTGGTGCT
GGTGGTGATTGCCGGCACCCGCGCCATTCACGGCCTGCTCAACCCCGAGCACGTGAGCGGCGCCATGCTGGGCCTCGCGG
TCACGCTCGTGGCGGTGGCCGGCAATGTCTATCTCAACCGCAAGGCCAAGCGCGTGGCCGAGGAGACCCATTCGCCGGTG
ATCGCCGCGCAGGCGCGCGTGCATCTGGTGTCGGCGGTCTCGTCCGGCTCGGTGTTCATCTGCACCGTCATCACGTCGAG
CTTTGAGGCGGAATGGATCGCCTATCTCGATCCGCTGGCCTCCTTCGTCGTCATCGGCCTGATGATCTTCAACATCTTCG
AGATGCTGTCGAACTCCATCGGCTCGCTGCTCGATCAGGCGATCGGCGAGGCGGGGCAGCTGCGCATCCTGCGCGCGCTC
GCCAGCCACTTCGATGATTTCGACGAACTGGGCGAGATCCGCACCCGCCAGCACGGCGGCAAGATGATGGTGGATCTGCA
CCTCGGCTTCGATCCCGAATGGACCGTCGGCCAGGCGCGCGCCGCCGCGGCCGGCATCCGCGCCGCCGTCGAGCGCGAGT
TTGAGGAGGCGGGGGACGAGGTGGACGTGTCCATCGTCCTCATCCCGCGCGAACCGGAGGCGGTGGCGGCCTGA

Upstream 100 bases:

>100_bases
GTCTCCCCCGATGCCGGCCCTAGATTGCAGAGCGGGGCGGGGCTGTGCAACTGCGGAAAAGGCCCGCTCTGTGCCGTTGC
GGGCGGCGGGCGCATGACCT

Downstream 100 bases:

>100_bases
GCCGCCGCCGCGCTTTCAGTAATCGGAAAGCGTGATGTCGTCAGACCAGTCGCCGGGCACGTCCTTGACGATGGCCTGCC
CGCAGATGACGCGGCCCTTC

Product: cation efflux protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MDGLASHGRAARRGPTSVSGSASQKLSFQAMVFVACLFPFYILAATLTNSAAVLTDLLATSFDLTSLTTCWLVLKIAHGR
EKGRFAYGLGKLENLAELMIAVLQVVLVVIAGTRAIHGLLNPEHVSGAMLGLAVTLVAVAGNVYLNRKAKRVAEETHSPV
IAAQARVHLVSAVSSGSVFICTVITSSFEAEWIAYLDPLASFVVIGLMIFNIFEMLSNSIGSLLDQAIGEAGQLRILRAL
ASHFDDFDELGEIRTRQHGGKMMVDLHLGFDPEWTVGQARAAAAGIRAAVEREFEEAGDEVDVSIVLIPREPEAVAA

Sequences:

>Translated_317_residues
MDGLASHGRAARRGPTSVSGSASQKLSFQAMVFVACLFPFYILAATLTNSAAVLTDLLATSFDLTSLTTCWLVLKIAHGR
EKGRFAYGLGKLENLAELMIAVLQVVLVVIAGTRAIHGLLNPEHVSGAMLGLAVTLVAVAGNVYLNRKAKRVAEETHSPV
IAAQARVHLVSAVSSGSVFICTVITSSFEAEWIAYLDPLASFVVIGLMIFNIFEMLSNSIGSLLDQAIGEAGQLRILRAL
ASHFDDFDELGEIRTRQHGGKMMVDLHLGFDPEWTVGQARAAAAGIRAAVEREFEEAGDEVDVSIVLIPREPEAVAA
>Mature_317_residues
MDGLASHGRAARRGPTSVSGSASQKLSFQAMVFVACLFPFYILAATLTNSAAVLTDLLATSFDLTSLTTCWLVLKIAHGR
EKGRFAYGLGKLENLAELMIAVLQVVLVVIAGTRAIHGLLNPEHVSGAMLGLAVTLVAVAGNVYLNRKAKRVAEETHSPV
IAAQARVHLVSAVSSGSVFICTVITSSFEAEWIAYLDPLASFVVIGLMIFNIFEMLSNSIGSLLDQAIGEAGQLRILRAL
ASHFDDFDELGEIRTRQHGGKMMVDLHLGFDPEWTVGQARAAAAGIRAAVEREFEEAGDEVDVSIVLIPREPEAVAA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 33815; Mature: 33815

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLASHGRAARRGPTSVSGSASQKLSFQAMVFVACLFPFYILAATLTNSAAVLTDLLAT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SFDLTSLTTCWLVLKIAHGREKGRFAYGLGKLENLAELMIAVLQVVLVVIAGTRAIHGLL
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPEHVSGAMLGLAVTLVAVAGNVYLNRKAKRVAEETHSPVIAAQARVHLVSAVSSGSVFI
CCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE
CTVITSSFEAEWIAYLDPLASFVVIGLMIFNIFEMLSNSIGSLLDQAIGEAGQLRILRAL
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ASHFDDFDELGEIRTRQHGGKMMVDLHLGFDPEWTVGQARAAAAGIRAAVEREFEEAGDE
HHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VDVSIVLIPREPEAVAA
EEEEEEEEECCCHHCCC
>Mature Secondary Structure
MDGLASHGRAARRGPTSVSGSASQKLSFQAMVFVACLFPFYILAATLTNSAAVLTDLLAT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SFDLTSLTTCWLVLKIAHGREKGRFAYGLGKLENLAELMIAVLQVVLVVIAGTRAIHGLL
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPEHVSGAMLGLAVTLVAVAGNVYLNRKAKRVAEETHSPVIAAQARVHLVSAVSSGSVFI
CCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE
CTVITSSFEAEWIAYLDPLASFVVIGLMIFNIFEMLSNSIGSLLDQAIGEAGQLRILRAL
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ASHFDDFDELGEIRTRQHGGKMMVDLHLGFDPEWTVGQARAAAAGIRAAVEREFEEAGDE
HHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VDVSIVLIPREPEAVAA
EEEEEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]