| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pgl [H]
Identifier: 158425254
GI number: 158425254
Start: 4167614
End: 4168339
Strand: Direct
Name: pgl [H]
Synonym: AZC_3630
Alternate gene names: 158425254
Gene position: 4167614-4168339 (Clockwise)
Preceding gene: 158425253
Following gene: 158425255
Centisome position: 77.61
GC content: 73.55
Gene sequence:
>726_bases ATGACCGAAACCGCACCGGGCGAGCTGCTGCCCGTCGCCTTCACGGCCTATGAGGATCGCGCGGCGCTCGCCCGCGCCCT CGCAGCCCACGTGGCCGAGGCCCTACGCCGGCGCCTCGCCACCGATGGCCGCGCCGCGCTCGCCGTCTCCGGCGGGCGCA CGCCCACCCTCTTCTTCGAGACGCTCTCCGGCGCTCCGCTCGACTGGGCGAAGGTGAGCGTGACGCTGGTGGACGAGCGC TGGGTGCCTGAGACTTCGGACCGCTCCAACGCCGCTCTCGTGCGCGCCCACTTGCTGCGTGGCCCCGCCACCGCCGCCCG CTTTGTGCCGCTCTATACCGGGGCCCCCACCCCTGAGGAGGGGCTCACCGCCGCCCATGCGGCCATCGCCGATCTCCCCC AGCCCTTCGCCGCCGTGGTGCTGGGCATGGGCGACGACGCCCACACCGCCTCCTTCTTTCCCGGCGCGGACACGCTGGCC ACCGCTATCGATCCGCGCACCGATGCCAAGCTCATCACCGCCCGCGCGCCGGCGGCGGGGGAGCCGCGCATCACCTTCAC CATCGGCCCGCTGATCGGCGCGGACGCCCTGTTCCTGCACATCGAGGGGGCCGGCAAGAAAGCCGTGCTCGATGCGGCGC GGGAACCCGGCGACCCCATGGAGCGTCCGATCCGCGCCATCCTGCTGCACAGCCCACGCCCGCTCGACGTGCTGTGGTGC CCCTGA
Upstream 100 bases:
>100_bases GCGCGACGGCCGCACCTGGATGGACGACTGACGCCTGCCGCGTGACCCCGGCTCCGGCCGGGGACCGCCCTGCCCTTCCG GCCCCGCACTGGAGCCCGCC
Downstream 100 bases:
>100_bases CGGAGATCCTTCCATGACCGACGTGACCACCGAGATCGCGGACCCGCAGGCGCGTGCCGAGGCGGTCTCCGCGGCCTGGG AGCGCCTCGCCGCCCTGCGC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTETAPGELLPVAFTAYEDRAALARALAAHVAEALRRRLATDGRAALAVSGGRTPTLFFETLSGAPLDWAKVSVTLVDER WVPETSDRSNAALVRAHLLRGPATAARFVPLYTGAPTPEEGLTAAHAAIADLPQPFAAVVLGMGDDAHTASFFPGADTLA TAIDPRTDAKLITARAPAAGEPRITFTIGPLIGADALFLHIEGAGKKAVLDAAREPGDPMERPIRAILLHSPRPLDVLWC P
Sequences:
>Translated_241_residues MTETAPGELLPVAFTAYEDRAALARALAAHVAEALRRRLATDGRAALAVSGGRTPTLFFETLSGAPLDWAKVSVTLVDER WVPETSDRSNAALVRAHLLRGPATAARFVPLYTGAPTPEEGLTAAHAAIADLPQPFAAVVLGMGDDAHTASFFPGADTLA TAIDPRTDAKLITARAPAAGEPRITFTIGPLIGADALFLHIEGAGKKAVLDAAREPGDPMERPIRAILLHSPRPLDVLWC P >Mature_240_residues TETAPGELLPVAFTAYEDRAALARALAAHVAEALRRRLATDGRAALAVSGGRTPTLFFETLSGAPLDWAKVSVTLVDERW VPETSDRSNAALVRAHLLRGPATAARFVPLYTGAPTPEEGLTAAHAAIADLPQPFAAVVLGMGDDAHTASFFPGADTLAT AIDPRTDAKLITARAPAAGEPRITFTIGPLIGADALFLHIEGAGKKAVLDAAREPGDPMERPIRAILLHSPRPLDVLWCP
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321687, Length=219, Percent_Identity=25.5707762557078, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321957, Length=216, Percent_Identity=28.7037037037037, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25300; Mature: 25169
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETAPGELLPVAFTAYEDRAALARALAAHVAEALRRRLATDGRAALAVSGGRTPTLFFE CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEE TLSGAPLDWAKVSVTLVDERWVPETSDRSNAALVRAHLLRGPATAARFVPLYTGAPTPEE ECCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCCHH GLTAAHAAIADLPQPFAAVVLGMGDDAHTASFFPGADTLATAIDPRTDAKLITARAPAAG HHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCC EPRITFTIGPLIGADALFLHIEGAGKKAVLDAAREPGDPMERPIRAILLHSPRPLDVLWC CCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHEEECCCCCCEEEEC P C >Mature Secondary Structure TETAPGELLPVAFTAYEDRAALARALAAHVAEALRRRLATDGRAALAVSGGRTPTLFFE CCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEE TLSGAPLDWAKVSVTLVDERWVPETSDRSNAALVRAHLLRGPATAARFVPLYTGAPTPEE ECCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCCHH GLTAAHAAIADLPQPFAAVVLGMGDDAHTASFFPGADTLATAIDPRTDAKLITARAPAAG HHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCC EPRITFTIGPLIGADALFLHIEGAGKKAVLDAAREPGDPMERPIRAILLHSPRPLDVLWC CCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHEEECCCCCCEEEEC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]