| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158425232
Identifier: 158425232
GI number: 158425232
Start: 4138378
End: 4138812
Strand: Reverse
Name: 158425232
Synonym: AZC_3608
Alternate gene names: NA
Gene position: 4138812-4138378 (Counterclockwise)
Preceding gene: 158425233
Following gene: 158425231
Centisome position: 77.08
GC content: 65.52
Gene sequence:
>435_bases ATGACGCCGTCTTTCGTCGGCGCGATCCTGTCGTCGCGCGCTTTCTTCATCTTTGCCCGTGTCGTCTTCACCTTCATCTT CTGGGGGGCGGGCATCGGCAAGATCGTCGATTATCAGGGCACGCTGGCGGAGATGGCGCACTTCGGCCTCAATCCGCCGC AGGTTTGGGCGCCGCTGGTCATCGTCACCCTGCTGGTGGGATCGGCGCTCATCATCGTCAATCGCTTCGCCTGGCTCGGC TGCGGCATGCTCGCGGTGTTCGTGGCGCTGACGATCCCGATCGCGCATCCCTTCTGGACGCTGCCCGAGCCGGAAGCGAC CTATCACTTCCACACGTTCGCCGAGCACGTCACCGTCATCGGAGCGCTGATGATCGCCGCCATTCTCTGCGCCGGTGCGC CGCGCACGGGGCGGCTGCTGCAGACGGGCGGCTGA
Upstream 100 bases:
>100_bases GCAACCGCAGCCTGCATGGCTGAACGGGGCCGCACGTGGGGAGAGCGGTGCTGCGGTGGCTTTATGTCGCGTGCAGTGCG CTCGTGCCGGGGAGCTGCAC
Downstream 100 bases:
>100_bases GGGGACGGCCCAACCCTCAAAGGGTGTGGGTTTCCACCGGCGCGGATGCCGCAGGGGCGTTTTCTCGCGTCGGGAACCCT TCTATGGTGCCTGCGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Family Transmembrane Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTPSFVGAILSSRAFFIFARVVFTFIFWGAGIGKIVDYQGTLAEMAHFGLNPPQVWAPLVIVTLLVGSALIIVNRFAWLG CGMLAVFVALTIPIAHPFWTLPEPEATYHFHTFAEHVTVIGALMIAAILCAGAPRTGRLLQTGG
Sequences:
>Translated_144_residues MTPSFVGAILSSRAFFIFARVVFTFIFWGAGIGKIVDYQGTLAEMAHFGLNPPQVWAPLVIVTLLVGSALIIVNRFAWLG CGMLAVFVALTIPIAHPFWTLPEPEATYHFHTFAEHVTVIGALMIAAILCAGAPRTGRLLQTGG >Mature_143_residues TPSFVGAILSSRAFFIFARVVFTFIFWGAGIGKIVDYQGTLAEMAHFGLNPPQVWAPLVIVTLLVGSALIIVNRFAWLGC GMLAVFVALTIPIAHPFWTLPEPEATYHFHTFAEHVTVIGALMIAAILCAGAPRTGRLLQTGG
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15514; Mature: 15382
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSFVGAILSSRAFFIFARVVFTFIFWGAGIGKIVDYQGTLAEMAHFGLNPPQVWAPLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHH IVTLLVGSALIIVNRFAWLGCGMLAVFVALTIPIAHPFWTLPEPEATYHFHTFAEHVTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH GALMIAAILCAGAPRTGRLLQTGG HHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TPSFVGAILSSRAFFIFARVVFTFIFWGAGIGKIVDYQGTLAEMAHFGLNPPQVWAPLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHH IVTLLVGSALIIVNRFAWLGCGMLAVFVALTIPIAHPFWTLPEPEATYHFHTFAEHVTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH GALMIAAILCAGAPRTGRLLQTGG HHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA