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The map label for this gene is yfhF [C]

Identifier: 158425233

GI number: 158425233

Start: 4139001

End: 4139429

Strand: Reverse

Name: yfhF [C]

Synonym: AZC_3609

Alternate gene names: 158425233

Gene position: 4139429-4139001 (Counterclockwise)

Preceding gene: 158425234

Following gene: 158425232

Centisome position: 77.09

GC content: 64.1

Gene sequence:

>429_bases
ATGAGAAACGTATCCGCCGGCCTTGAACCGGCGTGGTTCGGAGAAAAGTTCATGGCCCCACGTCCCCGTCCCGCCGTCAT
GCGCATCACGGAAGCCGCTGCTGCCCGCGTGCGGCAGATCATGGCCCGTACCGATCCGCCGCCGGTGGCGGTACGTGTCG
GCGTGAAGAATGGCGGCTGCGCCGGCATGTCCTACACCATGGACTATGCCACCGAGATCCTGCCCACCGACGAGGTGGTG
GAGGACAAGGGCGTGAAGGTCATCATCGACCCCAAGGCGGTGCTCTTCCTGCTGGGAACGGAGATGGACTTCAAGACCGA
CAAGCTGGCGTCTCAGTTCGTGTTCAACAATCCGAACCAGACCTCCGCCTGCGGCTGCGGCGAGTCGGTGGCCATCACCC
CCGCCAAGGAAGACGCGCTCTCCCTCTGA

Upstream 100 bases:

>100_bases
GGTCGAATTACTGACGCCGCTGGGTGCGGAGCAGCCCGGCACCAGCCGAAGCTGCCACCTTGTCCCTTGCCGCCCGCCCG
GAGCAGGCCCATCTTGGTAG

Downstream 100 bases:

>100_bases
TGGCGGACAGCGGCCTCTCCTTCCAGGCCCGCGCATGTGCAGGCTTCCCCTGCGGGAGCCTGTATGGCAGATGTGCTGAC
GTGAAACGGCAACCGCAGCC

Product: HesB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRNVSAGLEPAWFGEKFMAPRPRPAVMRITEAAAARVRQIMARTDPPPVAVRVGVKNGGCAGMSYTMDYATEILPTDEVV
EDKGVKVIIDPKAVLFLLGTEMDFKTDKLASQFVFNNPNQTSACGCGESVAITPAKEDALSL

Sequences:

>Translated_142_residues
MRNVSAGLEPAWFGEKFMAPRPRPAVMRITEAAAARVRQIMARTDPPPVAVRVGVKNGGCAGMSYTMDYATEILPTDEVV
EDKGVKVIIDPKAVLFLLGTEMDFKTDKLASQFVFNNPNQTSACGCGESVAITPAKEDALSL
>Mature_142_residues
MRNVSAGLEPAWFGEKFMAPRPRPAVMRITEAAAARVRQIMARTDPPPVAVRVGVKNGGCAGMSYTMDYATEILPTDEVV
EDKGVKVIIDPKAVLFLLGTEMDFKTDKLASQFVFNNPNQTSACGCGESVAITPAKEDALSL

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=112, Percent_Identity=47.3214285714286, Blast_Score=110, Evalue=3e-25,
Organism=Homo sapiens, GI160420328, Length=115, Percent_Identity=31.304347826087, Blast_Score=74, Evalue=6e-14,
Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=42.4528301886792, Blast_Score=97, Evalue=4e-22,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=33.9622641509434, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=39.622641509434, Blast_Score=84, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25146411, Length=115, Percent_Identity=46.0869565217391, Blast_Score=115, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI193209025, Length=108, Percent_Identity=48.1481481481481, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323001, Length=108, Percent_Identity=45.3703703703704, Blast_Score=107, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24642263, Length=111, Percent_Identity=50.4504504504504, Blast_Score=113, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 15277; Mature: 15277

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVSAGLEPAWFGEKFMAPRPRPAVMRITEAAAARVRQIMARTDPPPVAVRVGVKNGGC
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
AGMSYTMDYATEILPTDEVVEDKGVKVIIDPKAVLFLLGTEMDFKTDKLASQFVFNNPNQ
CCCEEEHHHHHHCCCCCHHHCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCCC
TSACGCGESVAITPAKEDALSL
CCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MRNVSAGLEPAWFGEKFMAPRPRPAVMRITEAAAARVRQIMARTDPPPVAVRVGVKNGGC
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
AGMSYTMDYATEILPTDEVVEDKGVKVIIDPKAVLFLLGTEMDFKTDKLASQFVFNNPNQ
CCCEEEHHHHHHCCCCCHHHCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCCC
TSACGCGESVAITPAKEDALSL
CCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]