| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is iorB [H]
Identifier: 158424898
GI number: 158424898
Start: 3780126
End: 3782312
Strand: Reverse
Name: iorB [H]
Synonym: AZC_3274
Alternate gene names: 158424898
Gene position: 3782312-3780126 (Counterclockwise)
Preceding gene: 158424899
Following gene: 158424896
Centisome position: 70.44
GC content: 66.8
Gene sequence:
>2187_bases ATGACGCATTCTTCCCAGATCTCCTCCTCGGCCCTCAGCCGGCGCGGGTTCCTGCGCGGCGGCGCGGTGGCGGCCGGTGC CTTCACCTTCGGCTTCAGCTTCCCGGCGCTGAAGCCGGCCCTTGCCCAGACGGCCCCGAACGAGGTCAACGCCTGGGTGG TGGTGCAGCCCGACGAGACGGTCATCATCCGCATCGCCCGCATCGAGATGGGGCAGGGGGCCTTGACCGGCCTTGCCCAA CTGGTGGCCGAGGAACTTGACTGCGACTGGGACAAGGTGCGCTTCGAGCTCGTCAATCCCGGCAGCAACAAGAGCCGGGG CAATGCCTGGCGCTCGCAGCAGACAGGCGGCTCGCGCTCCATCCGCGGCTCGCACGATTATCTGCGGCTCGGAGGCGCGC AGGCGCGTGCCATGCTGGTGGAAGCGGCCGCTCGGAGCTGGAACGTGCCGGCGGCGCAGTGCCGGGCTGCCAAGGGCGTC ATCACTCACGCCGCCAGCGGGCGCACCATCACCTATGGGGCGGTTGCAACGGCAGCCAATGCGGTTCCCGTGCCGGCCGA TGTGCCGCTGAAGGATCCGAAGGACTGGACCATCGCCGGCAAGCCGCTGAAGCGTCTCGACACGCTGGACAAGCTCAACG GCTCGCTGGTCTATGGCATGGACATCCGCATGCCCGGCATGCTGGTGGCGATCCCCAAGGCCTGTCCCGTTCAGGGGGGC AAGGTCAAGAGCTTCGACGCGGCCGCCGTTTCGGGCATGCGCGGCGTCAAGCATGTGCTGAAGGTGGATGACGAGACGGT GGCGGTGGTGGCCGACACCTTCTGGCGGGCCAAGACCGCACTCGATGCTCTGCCGATCCAGTGGGACGAGGGACCGAACG CCAAGGTCTCCAGTGCCACCATCGCCGCGACGCTGCGCGAGGGACTTTCTGCGCCCGACGCCTTTGTCGGACACAAGGCT GGGGATGCCAAGGCCGTGCTCGGCAAGGCGAGCCGCGTCATCGAAGCGGACTATGGTTTCCCCTATCAGAACCATGCCCC CATGGAGGTGTTGAGCGCGACCGTGCGCTGGACGGCCGACCGCTGCGAGGCCTGGGCGCCCACCCAGTCGCCCGAGGCGG CGCACGCCACGCTTGCCACCGCCGCCGGTCTTTCGCCGGATAAATGCGAAGTCAATGTCATGCGCATCGGCGGCAGCTTC GGGCGACGTCTCGCGACGGACTATCTGCGCATCGCCACCCTGATCGCGAAGCAGGTACCGGGCGTCCCGGTGAAGATGAT GTGGACCCGGGAAGAGGACATGCTTCAGGGGCGCTTCCATCCGGTCACCCAGGCCCGCTTCCGGGCGACGCTGGACGGGC AGGGCAATGTGGAGGCGCTGCACATGCGCATCTCCGGCCAGTCCATCGCCAGCTATGCCATACCGTCTCTGGTGGGCAAT AATGGCGATCCTCTGGTCTATCAGGGGCTGCTTCCCGACGGGCCGGAAGGGCGCCTCGGCTACACCATTCCCAACATTCT GATCGATTACGCGATGCGCAATCCGCACATCCGGCCGGGCTTCTGGCGGGGCGTGAACCTCAATCAGAATGCGGTCTATA TGGAGAGCTTCATCGACGAGCTGGCCCATGCCGCGCGGCAGGACCCGCTGGAGTTCCGCCGCAGGCTCATGAAGAACCAT CCTAAGCACCTTGCTGTCCTGGAGGCCGCCGCCAGGGGCATCGGCTGGGGCGAGAAGCCGGCGGCGGGACGCGCCCGTGG TCTGGCGCAGATCATGGGCTTCGGCAGCTACGTGGCCGCTGCCGCCGAGGTCTCGGTCACGAAAGGACAGTTGCGCATCC ACCGCATCGTGGCTGCCACCGATCCCGGTTATGTGGTCAATCCGCAGCAGGTGGAGGCGCAGGTGGCCGGCTCGTTCGTC TACGGGCTCTCCGCCATGCTCTACGGTGAGTGCACCGTGAAGGACGGGCGCATCGAGCAGGAGAATTTCGACACCTACAA CGTCATGCGGCTCGACGAGATGCCGGAGGTTGAGGTGATCTCCATGCCGTCCGGCGGCTTCTGGGGCGGTGTCGGCGAGC CCACGATCGCGGTTGCGGCGCCGGCGGTGCTGAACGCCATCTACGCCGCGACCGGCAAGCGGGTGCGGCAGCTGCCGTTG AAGAATGTGGATCTCAACGTGAGCTGA
Upstream 100 bases:
>100_bases ATCACCAATATCTGCCGTTGCGGGACCTATGGGCGCGTGCTCGCCGGCACCAAGCTCGCCGCTGCCCGCATGGCATCCAA CCGGGGGTGAGGAGGCCGTC
Downstream 100 bases:
>100_bases TGCGGCTTTGCCGCAGGGTGAGATGGCATGATCCGGACGAAGGCGGGGCGTCGGCTATCGGCGCCCCGGTTTCTTGTCGG CGACCGTTGCCTGGATCGCC
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 728; Mature: 727
Protein sequence:
>728_residues MTHSSQISSSALSRRGFLRGGAVAAGAFTFGFSFPALKPALAQTAPNEVNAWVVVQPDETVIIRIARIEMGQGALTGLAQ LVAEELDCDWDKVRFELVNPGSNKSRGNAWRSQQTGGSRSIRGSHDYLRLGGAQARAMLVEAAARSWNVPAAQCRAAKGV ITHAASGRTITYGAVATAANAVPVPADVPLKDPKDWTIAGKPLKRLDTLDKLNGSLVYGMDIRMPGMLVAIPKACPVQGG KVKSFDAAAVSGMRGVKHVLKVDDETVAVVADTFWRAKTALDALPIQWDEGPNAKVSSATIAATLREGLSAPDAFVGHKA GDAKAVLGKASRVIEADYGFPYQNHAPMEVLSATVRWTADRCEAWAPTQSPEAAHATLATAAGLSPDKCEVNVMRIGGSF GRRLATDYLRIATLIAKQVPGVPVKMMWTREEDMLQGRFHPVTQARFRATLDGQGNVEALHMRISGQSIASYAIPSLVGN NGDPLVYQGLLPDGPEGRLGYTIPNILIDYAMRNPHIRPGFWRGVNLNQNAVYMESFIDELAHAARQDPLEFRRRLMKNH PKHLAVLEAAARGIGWGEKPAAGRARGLAQIMGFGSYVAAAAEVSVTKGQLRIHRIVAATDPGYVVNPQQVEAQVAGSFV YGLSAMLYGECTVKDGRIEQENFDTYNVMRLDEMPEVEVISMPSGGFWGGVGEPTIAVAAPAVLNAIYAATGKRVRQLPL KNVDLNVS
Sequences:
>Translated_728_residues MTHSSQISSSALSRRGFLRGGAVAAGAFTFGFSFPALKPALAQTAPNEVNAWVVVQPDETVIIRIARIEMGQGALTGLAQ LVAEELDCDWDKVRFELVNPGSNKSRGNAWRSQQTGGSRSIRGSHDYLRLGGAQARAMLVEAAARSWNVPAAQCRAAKGV ITHAASGRTITYGAVATAANAVPVPADVPLKDPKDWTIAGKPLKRLDTLDKLNGSLVYGMDIRMPGMLVAIPKACPVQGG KVKSFDAAAVSGMRGVKHVLKVDDETVAVVADTFWRAKTALDALPIQWDEGPNAKVSSATIAATLREGLSAPDAFVGHKA GDAKAVLGKASRVIEADYGFPYQNHAPMEVLSATVRWTADRCEAWAPTQSPEAAHATLATAAGLSPDKCEVNVMRIGGSF GRRLATDYLRIATLIAKQVPGVPVKMMWTREEDMLQGRFHPVTQARFRATLDGQGNVEALHMRISGQSIASYAIPSLVGN NGDPLVYQGLLPDGPEGRLGYTIPNILIDYAMRNPHIRPGFWRGVNLNQNAVYMESFIDELAHAARQDPLEFRRRLMKNH PKHLAVLEAAARGIGWGEKPAAGRARGLAQIMGFGSYVAAAAEVSVTKGQLRIHRIVAATDPGYVVNPQQVEAQVAGSFV YGLSAMLYGECTVKDGRIEQENFDTYNVMRLDEMPEVEVISMPSGGFWGGVGEPTIAVAAPAVLNAIYAATGKRVRQLPL KNVDLNVS >Mature_727_residues THSSQISSSALSRRGFLRGGAVAAGAFTFGFSFPALKPALAQTAPNEVNAWVVVQPDETVIIRIARIEMGQGALTGLAQL VAEELDCDWDKVRFELVNPGSNKSRGNAWRSQQTGGSRSIRGSHDYLRLGGAQARAMLVEAAARSWNVPAAQCRAAKGVI THAASGRTITYGAVATAANAVPVPADVPLKDPKDWTIAGKPLKRLDTLDKLNGSLVYGMDIRMPGMLVAIPKACPVQGGK VKSFDAAAVSGMRGVKHVLKVDDETVAVVADTFWRAKTALDALPIQWDEGPNAKVSSATIAATLREGLSAPDAFVGHKAG DAKAVLGKASRVIEADYGFPYQNHAPMEVLSATVRWTADRCEAWAPTQSPEAAHATLATAAGLSPDKCEVNVMRIGGSFG RRLATDYLRIATLIAKQVPGVPVKMMWTREEDMLQGRFHPVTQARFRATLDGQGNVEALHMRISGQSIASYAIPSLVGNN GDPLVYQGLLPDGPEGRLGYTIPNILIDYAMRNPHIRPGFWRGVNLNQNAVYMESFIDELAHAARQDPLEFRRRLMKNHP KHLAVLEAAARGIGWGEKPAAGRARGLAQIMGFGSYVAAAAEVSVTKGQLRIHRIVAATDPGYVVNPQQVEAQVAGSFVY GLSAMLYGECTVKDGRIEQENFDTYNVMRLDEMPEVEVISMPSGGFWGGVGEPTIAVAAPAVLNAIYAATGKRVRQLPLK NVDLNVS
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 77993; Mature: 77862
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSSQISSSALSRRGFLRGGAVAAGAFTFGFSFPALKPALAQTAPNEVNAWVVVQPDET CCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCCCCCEEEEECCCCE VIIRIARIEMGQGALTGLAQLVAEELDCDWDKVRFELVNPGSNKSRGNAWRSQQTGGSRS EEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCC IRGSHDYLRLGGAQARAMLVEAAARSWNVPAAQCRAAKGVITHAASGRTITYGAVATAAN CCCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCEEEEEHHHHCCC AVPVPADVPLKDPKDWTIAGKPLKRLDTLDKLNGSLVYGMDIRMPGMLVAIPKACPVQGG CCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCC KVKSFDAAAVSGMRGVKHVLKVDDETVAVVADTFWRAKTALDALPIQWDEGPNAKVSSAT CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCEEECCCCCCCCCHHH IAATLREGLSAPDAFVGHKAGDAKAVLGKASRVIEADYGFPYQNHAPMEVLSATVRWTAD HHHHHHHCCCCCCHHHCCCCCCHHHHHHCCHHEEECCCCCCCCCCCCHHHHHHHHHCCHH RCEAWAPTQSPEAAHATLATAAGLSPDKCEVNVMRIGGSFGRRLATDYLRIATLIAKQVP HHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC GVPVKMMWTREEDMLQGRFHPVTQARFRATLDGQGNVEALHMRISGQSIASYAIPSLVGN CCCEEEEEECCHHHHCCCCCCCCHHHEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHCC NGDPLVYQGLLPDGPEGRLGYTIPNILIDYAMRNPHIRPGFWRGVNLNQNAVYMESFIDE CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHH LAHAARQDPLEFRRRLMKNHPKHLAVLEAAARGIGWGEKPAAGRARGLAQIMGFGSYVAA HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH AAEVSVTKGQLRIHRIVAATDPGYVVNPQQVEAQVAGSFVYGLSAMLYGECTVKDGRIEQ HHHEEEECCCEEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC ENFDTYNVMRLDEMPEVEVISMPSGGFWGGVGEPTIAVAAPAVLNAIYAATGKRVRQLPL CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCHHHHHCCC KNVDLNVS CCCCCCCC >Mature Secondary Structure THSSQISSSALSRRGFLRGGAVAAGAFTFGFSFPALKPALAQTAPNEVNAWVVVQPDET CCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCCCCCEEEEECCCCE VIIRIARIEMGQGALTGLAQLVAEELDCDWDKVRFELVNPGSNKSRGNAWRSQQTGGSRS EEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCC IRGSHDYLRLGGAQARAMLVEAAARSWNVPAAQCRAAKGVITHAASGRTITYGAVATAAN CCCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCEEEEEHHHHCCC AVPVPADVPLKDPKDWTIAGKPLKRLDTLDKLNGSLVYGMDIRMPGMLVAIPKACPVQGG CCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCC KVKSFDAAAVSGMRGVKHVLKVDDETVAVVADTFWRAKTALDALPIQWDEGPNAKVSSAT CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCEEECCCCCCCCCHHH IAATLREGLSAPDAFVGHKAGDAKAVLGKASRVIEADYGFPYQNHAPMEVLSATVRWTAD HHHHHHHCCCCCCHHHCCCCCCHHHHHHCCHHEEECCCCCCCCCCCCHHHHHHHHHCCHH RCEAWAPTQSPEAAHATLATAAGLSPDKCEVNVMRIGGSFGRRLATDYLRIATLIAKQVP HHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC GVPVKMMWTREEDMLQGRFHPVTQARFRATLDGQGNVEALHMRISGQSIASYAIPSLVGN CCCEEEEEECCHHHHCCCCCCCCHHHEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHCC NGDPLVYQGLLPDGPEGRLGYTIPNILIDYAMRNPHIRPGFWRGVNLNQNAVYMESFIDE CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHH LAHAARQDPLEFRRRLMKNHPKHLAVLEAAARGIGWGEKPAAGRARGLAQIMGFGSYVAA HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH AAEVSVTKGQLRIHRIVAATDPGYVVNPQQVEAQVAGSFVYGLSAMLYGECTVKDGRIEQ HHHEEEECCCEEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC ENFDTYNVMRLDEMPEVEVISMPSGGFWGGVGEPTIAVAAPAVLNAIYAATGKRVRQLPL CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCHHHHHCCC KNVDLNVS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]