| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yxaH [H]
Identifier: 158424865
GI number: 158424865
Start: 3737575
End: 3738786
Strand: Direct
Name: yxaH [H]
Synonym: AZC_3241
Alternate gene names: 158424865
Gene position: 3737575-3738786 (Clockwise)
Preceding gene: 158424864
Following gene: 158424866
Centisome position: 69.6
GC content: 64.44
Gene sequence:
>1212_bases ATGACAGCGAACCAGACGGCACGGCCGGCTTCCCGCACCCGCGATCCCCGGATCGACGCGGTGCGGGGCATCGCCCTGAT GGGCATCCTCGTGGTCAACCTGCCCTTCCTCGCCATGCCTTACGGTTTTGCCGGCGCCAGTTGGCATCACGCGGACACCT TCTACCTTGGATCGTTCAGCGCCTGGTTCATTCAGGCACTGTTCGAGAACAAGTTCATTCTCATCTTCGCCTTTCTGTTC GGCATGGGGGCCGCCGCCCAGGTGAGCGCGAACGGCGCGCGGCGCTTCGTGTTTCGAATGCTGCTGCTCGGGCTGCTTGG CGTCCTGAATGCCGTGCTGGTCTTCGAGGCGGACATCCTGCTTCCCTACGCCGTGCTGGGCTTGCTGATGCTGCCGCTGC ATCGCCTGCTGACCCGAACCCTGCTTTCGGCCGCCCTCCTGTTCTGGATCGTCGCCATCCTGGGGCACGCGCTCTTTGCC ATCTATGTGGCGACGGCCGAGACGGGGCCCGGTCTTTCGGAAGAGGCCCGCATCCAGCTGTTTTCGTCGGGTGGCTTCGT TGCCATGGCGCATCAGCGGGCGCGCGACTGGCTCGTCTTTTCGCAGATGAGCATTCCCGCCATCTGGCCGATGACCATGA GCGCCTTCTGTCTCGGCATGGCGGCATTCCGCTTGCGGATAGCTTCCGCAGGAGACGGGTTCAGTTCGCTGGAGCGGATC GCACGCGTGCTGCTTCTGCCCGCGCTGCTGGGCAACCTCGCCTACGGCGCCCTGTGCCTCGCGCCCGCGGATTGGGCCGG CGGGCATGTTTTCCTCGCCACGCTCGTGCTGAGGCCGGTTTTTGCTCCCATGCTCAGTTTTGTCATCTTCGCCCTGCTGT TCCGCCTGCTGGAGCGCACGCCGCGCCTGACGGACTTCTTCGCCGCAAGCGGGCGCATGTCGCTCAGCATCTACATGCTT CAAGGTATCCTGGGTGGCTTCATTTTCTTCGGCTACGGCGCCGGTCTTTACGCCAGCCTCAGCCTTCAGGCCGTTCTTGG ACTCGCATTCCTCCTGTTTGTTCTTCTCGCGCTCCTCGCCCGCCTCTGGCTGGGCCGTTTCAGGAGCGGACCATTTGAAG CCCTGATGGCCGCGGCGCTGGCCTTAACCGAACGGCGTTTATCAACGCCGCCGGCAGCCCTTCGTGCAGGCCCCAGAGCC GCTCCCCGCTGA
Upstream 100 bases:
>100_bases CCCGAAATCTGCAACTCCGGCACCTGCTATCTGGGGCAGGGCCGCACGGTGGTCGGCACGCTCAAATACAAGTGGTGACA GGCTCCAGCGGAGGCTCCGC
Downstream 100 bases:
>100_bases CGGCCAGGAGACCATCAGGACACCATTTCATACTCAACCGTGGAGCCTTCGATGTCGACGAAGCCAAAGGACTTGGCTGC GAACGAACTGGTGCGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTANQTARPASRTRDPRIDAVRGIALMGILVVNLPFLAMPYGFAGASWHHADTFYLGSFSAWFIQALFENKFILIFAFLF GMGAAAQVSANGARRFVFRMLLLGLLGVLNAVLVFEADILLPYAVLGLLMLPLHRLLTRTLLSAALLFWIVAILGHALFA IYVATAETGPGLSEEARIQLFSSGGFVAMAHQRARDWLVFSQMSIPAIWPMTMSAFCLGMAAFRLRIASAGDGFSSLERI ARVLLLPALLGNLAYGALCLAPADWAGGHVFLATLVLRPVFAPMLSFVIFALLFRLLERTPRLTDFFAASGRMSLSIYML QGILGGFIFFGYGAGLYASLSLQAVLGLAFLLFVLLALLARLWLGRFRSGPFEALMAAALALTERRLSTPPAALRAGPRA APR
Sequences:
>Translated_403_residues MTANQTARPASRTRDPRIDAVRGIALMGILVVNLPFLAMPYGFAGASWHHADTFYLGSFSAWFIQALFENKFILIFAFLF GMGAAAQVSANGARRFVFRMLLLGLLGVLNAVLVFEADILLPYAVLGLLMLPLHRLLTRTLLSAALLFWIVAILGHALFA IYVATAETGPGLSEEARIQLFSSGGFVAMAHQRARDWLVFSQMSIPAIWPMTMSAFCLGMAAFRLRIASAGDGFSSLERI ARVLLLPALLGNLAYGALCLAPADWAGGHVFLATLVLRPVFAPMLSFVIFALLFRLLERTPRLTDFFAASGRMSLSIYML QGILGGFIFFGYGAGLYASLSLQAVLGLAFLLFVLLALLARLWLGRFRSGPFEALMAAALALTERRLSTPPAALRAGPRA APR >Mature_402_residues TANQTARPASRTRDPRIDAVRGIALMGILVVNLPFLAMPYGFAGASWHHADTFYLGSFSAWFIQALFENKFILIFAFLFG MGAAAQVSANGARRFVFRMLLLGLLGVLNAVLVFEADILLPYAVLGLLMLPLHRLLTRTLLSAALLFWIVAILGHALFAI YVATAETGPGLSEEARIQLFSSGGFVAMAHQRARDWLVFSQMSIPAIWPMTMSAFCLGMAAFRLRIASAGDGFSSLERIA RVLLLPALLGNLAYGALCLAPADWAGGHVFLATLVLRPVFAPMLSFVIFALLFRLLERTPRLTDFFAASGRMSLSIYMLQ GILGGFIFFGYGAGLYASLSLQAVLGLAFLLFVLLALLARLWLGRFRSGPFEALMAAALALTERRLSTPPAALRAGPRAA PR
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788475, Length=379, Percent_Identity=26.1213720316623, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 43712; Mature: 43581
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANQTARPASRTRDPRIDAVRGIALMGILVVNLPFLAMPYGFAGASWHHADTFYLGSFS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHH AWFIQALFENKFILIFAFLFGMGAAAQVSANGARRFVFRMLLLGLLGVLNAVLVFEADIL HHHHHHHHHCCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPYAVLGLLMLPLHRLLTRTLLSAALLFWIVAILGHALFAIYVATAETGPGLSEEARIQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEE FSSGGFVAMAHQRARDWLVFSQMSIPAIWPMTMSAFCLGMAAFRLRIASAGDGFSSLERI ECCCCEEEEHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ARVLLLPALLGNLAYGALCLAPADWAGGHVFLATLVLRPVFAPMLSFVIFALLFRLLERT HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRLTDFFAASGRMSLSIYMLQGILGGFIFFGYGAGLYASLSLQAVLGLAFLLFVLLALLA CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLWLGRFRSGPFEALMAAALALTERRLSTPPAALRAGPRAAPR HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC >Mature Secondary Structure TANQTARPASRTRDPRIDAVRGIALMGILVVNLPFLAMPYGFAGASWHHADTFYLGSFS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHH AWFIQALFENKFILIFAFLFGMGAAAQVSANGARRFVFRMLLLGLLGVLNAVLVFEADIL HHHHHHHHHCCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPYAVLGLLMLPLHRLLTRTLLSAALLFWIVAILGHALFAIYVATAETGPGLSEEARIQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEE FSSGGFVAMAHQRARDWLVFSQMSIPAIWPMTMSAFCLGMAAFRLRIASAGDGFSSLERI ECCCCEEEEHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ARVLLLPALLGNLAYGALCLAPADWAGGHVFLATLVLRPVFAPMLSFVIFALLFRLLERT HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRLTDFFAASGRMSLSIYMLQGILGGFIFFGYGAGLYASLSLQAVLGLAFLLFVLLALLA CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLWLGRFRSGPFEALMAAALALTERRLSTPPAALRAGPRAAPR HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]