| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fecR [H]
Identifier: 158424863
GI number: 158424863
Start: 3733974
End: 3734975
Strand: Direct
Name: fecR [H]
Synonym: AZC_3239
Alternate gene names: 158424863
Gene position: 3733974-3734975 (Clockwise)
Preceding gene: 158424862
Following gene: 158424864
Centisome position: 69.54
GC content: 67.86
Gene sequence:
>1002_bases ATGACACGCCCAGACTATCCCTCGGCCACACGGGCCGAACTTGATGCGCCCATGGCGCCGCTTGCCGAGAAAGCCCTGGA ATGGCTGGTCTTCCTGCATTCGGGCCAGGAAACCGACGCAGACTGGGCGGCCTATGAGGATTGGCGTGCCAGCGGGGTGG CGGAACGCAAGGCGGCGGAACAGGCGGAAAGGCTATGGGCCGGCATCGGCCCCGCTCTGCGCCGGCCGCGTGCGGGACTT CCGCGCCGCTCCGTACTGGCCGGCGCCGGCATCGCACTCGTCGGAGGGGCCGGGCTCGCGGCCTTCTTAGGCATGCGCCG GGACCTATTCGCGGATGTGCGCACTGCGGTCGGCGAGCGCCGCACGCTCACCCTCGCGGACGGAACACGCATCGAACTCG ATGCCGCGACCAGCCTGGACCTGCATTATTCGGCGAAGACCCGGCGGATCGAGCTTCTGGAGGGGCGGATCTTCGTCAGC GTCGCGGCCGATCCGAACCGCCCCTTCATCGTCGACGCCGGGGGTGGGGCAGCGCGGGCCCTTGGAACGGCGTTCGAAAT CAGCCGTAGCGGCGATATGGTGAATGTCGTCGTCAGCGAACATACCGTGCGGGTGTGCTATCCGCGCGAGACCGATGGGC CCCACGTGGACGTCGATGCCGGCAGCGAGGTCGAATTCAGCAGGGCCGGAGGCCTCGCCAGGCCGCATGCCGCCGACGTC GTCAGCCGCATGTCCTGGCGCAACGGCCTTCTCGCCTTCCAAGATCGGCCGCTGGCCGAAGTGGTCGCGCAGATCTCCCG CTATCGTCACGGCCGCATCGTGATCGTGGATGGGGAACTGGCGCGCCTGCCCGTATCGGGATTATTCGAAAGCGCGGACA CCGCGGCCCTGCTGGATGCTCTATCCGCCGCCCTGCCCGTCACCATCGACCAACTGCCATGGCTTACCCTGATACGGCGT GATGCGTCCCGCCCGCTCGAGCCCTTCACACGGCGCAGATAA
Upstream 100 bases:
>100_bases GCGCTGTGATCACATTCTCTTGTTTTTGCATCTCTACGGTAGGGACGTGCGGATCTCGATCGTCTTCTCGTGCAAGGACA CAGTTAATCCGCACGCGACC
Downstream 100 bases:
>100_bases GAAACACTCCATTGTTTGCTGAGCGGGTGTCGCATCCCGCGCCTCCGGCGTCTTCCCAAACGAACGGCCTTTGCGGCCAC GATGTGCGGCAGATCAGTCT
Product: iron siderophore sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTRPDYPSATRAELDAPMAPLAEKALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAEQAERLWAGIGPALRRPRAGL PRRSVLAGAGIALVGGAGLAAFLGMRRDLFADVRTAVGERRTLTLADGTRIELDAATSLDLHYSAKTRRIELLEGRIFVS VAADPNRPFIVDAGGGAARALGTAFEISRSGDMVNVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAGGLARPHAADV VSRMSWRNGLLAFQDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDALSAALPVTIDQLPWLTLIRR DASRPLEPFTRRR
Sequences:
>Translated_333_residues MTRPDYPSATRAELDAPMAPLAEKALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAEQAERLWAGIGPALRRPRAGL PRRSVLAGAGIALVGGAGLAAFLGMRRDLFADVRTAVGERRTLTLADGTRIELDAATSLDLHYSAKTRRIELLEGRIFVS VAADPNRPFIVDAGGGAARALGTAFEISRSGDMVNVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAGGLARPHAADV VSRMSWRNGLLAFQDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDALSAALPVTIDQLPWLTLIRR DASRPLEPFTRRR >Mature_332_residues TRPDYPSATRAELDAPMAPLAEKALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAEQAERLWAGIGPALRRPRAGLP RRSVLAGAGIALVGGAGLAAFLGMRRDLFADVRTAVGERRTLTLADGTRIELDAATSLDLHYSAKTRRIELLEGRIFVSV AADPNRPFIVDAGGGAARALGTAFEISRSGDMVNVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAGGLARPHAADVV SRMSWRNGLLAFQDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDALSAALPVTIDQLPWLTLIRRD ASRPLEPFTRRR
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=213, Percent_Identity=31.924882629108, Blast_Score=101, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 36088; Mature: 35957
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPDYPSATRAELDAPMAPLAEKALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAE CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHH QAERLWAGIGPALRRPRAGLPRRSVLAGAGIALVGGAGLAAFLGMRRDLFADVRTAVGER HHHHHHHHCCHHHCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCC RTLTLADGTRIELDAATSLDLHYSAKTRRIELLEGRIFVSVAADPNRPFIVDAGGGAARA EEEEEECCCEEEEECCCEEEEEECCCCCEEEEEECEEEEEEECCCCCCEEEECCCCHHHH LGTAFEISRSGDMVNVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAGGLARPHAADV HHHHEEECCCCCEEEEEEECCEEEEEECCCCCCCEEECCCCCCEEHHHCCCCCCCHHHHH VSRMSWRNGLLAFQDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDA HHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHCCCHHHHHHHH LSAALPVTIDQLPWLTLIRRDASRPLEPFTRRR HHHHCCCCHHHCHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure TRPDYPSATRAELDAPMAPLAEKALEWLVFLHSGQETDADWAAYEDWRASGVAERKAAE CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHH QAERLWAGIGPALRRPRAGLPRRSVLAGAGIALVGGAGLAAFLGMRRDLFADVRTAVGER HHHHHHHHCCHHHCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCC RTLTLADGTRIELDAATSLDLHYSAKTRRIELLEGRIFVSVAADPNRPFIVDAGGGAARA EEEEEECCCEEEEECCCEEEEEECCCCCEEEEEECEEEEEEECCCCCCEEEECCCCHHHH LGTAFEISRSGDMVNVVVSEHTVRVCYPRETDGPHVDVDAGSEVEFSRAGGLARPHAADV HHHHEEECCCCCEEEEEEECCEEEEEECCCCCCCEEECCCCCCEEHHHCCCCCCCHHHHH VSRMSWRNGLLAFQDRPLAEVVAQISRYRHGRIVIVDGELARLPVSGLFESADTAALLDA HHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHCCCHHHHHHHH LSAALPVTIDQLPWLTLIRRDASRPLEPFTRRR HHHHCCCCHHHCHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]