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The map label for this gene is tetR [C]

Identifier: 158424622

GI number: 158424622

Start: 3428401

End: 3429153

Strand: Direct

Name: tetR [C]

Synonym: AZC_2998

Alternate gene names: 158424622

Gene position: 3428401-3429153 (Clockwise)

Preceding gene: 158424613

Following gene: 158424623

Centisome position: 63.85

GC content: 64.41

Gene sequence:

>753_bases
TTGACTGTTTGTAAGTGCAATGCCTTGCTAGCCATGCTTTCAACGGTCGAGGTCAAGGCGGTGGCGGAGCGGCGCAGGCG
ATCCCAGCATGAGCGGACGGCGGAAACGTCCGCGCGCCTGCTCAACGCGACCATCGACCTGCTGCACGACAACGGCTTCT
CCCGCCTCTCCACGCCGCAGATCGCCGCGCATGCGGGCGTCTCGCGCGGAGCGCTCACGCATCACTTCTCCAGCAAGGAG
GAGCTGATCACCGATGCCATCAACGACATGCTGGAGCGCGTGACGGCGGACCTCCACCGCTTCGCGGAAGACATCGCACG
ACGCGGCGGCTCCAGCGACGAGATCGTCGATTACATCTGGCAGATGATGTCCGATCGGCTCTTCTACGTGACGATGGAAT
ATCTGCCCGAGGCCCGCCACAACGGCGAGTTCAAGGAACGTCTGATCCCCGTGGTGAAGAAGTTCCATGCCGGCCTTGAT
GCCATCTGGATGGCCCTCGCCGCCCGTCGCGGGGCCGATCCGGAAAAGACCCGCACGGTGATGAACACCACCATGTGCCT
CGTGCGCGGCATGATCGCCCAGACGGTGCTGCGCGAGGACCCGAGCTATTTCAATGAGATGCTCGCCTTCTGGAAGGCCC
AGGTGGCGCAGCATTTCCCGGAGGAGATCGCGAGCGAGACGCGCCTTGCCTCCCCTTCCCGTTCCCAATCCCCGGCCGCG
CGCGCTTCGGCCGCGACGGTGGCGGGCAAATAG

Upstream 100 bases:

>100_bases
GATCGCCCGCGACATCGCGCTCGCTCTTCCCGCGCAAACCGGCGTCTCCGCTGGACAAACGGCGGGCAGATGCCTCTTCG
CAACGCAGTAATAAACAGGC

Downstream 100 bases:

>100_bases
ACCTTCCGGAGTATCGAGACATGGCCCTGCTGATCACCAATGCGCACATCGTCGACGGCACCTCTGCGGAGCGTGGCGAG
AAGGTGGACGTTCTCGTCGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTVCKCNALLAMLSTVEVKAVAERRRRSQHERTAETSARLLNATIDLLHDNGFSRLSTPQIAAHAGVSRGALTHHFSSKE
ELITDAINDMLERVTADLHRFAEDIARRGGSSDEIVDYIWQMMSDRLFYVTMEYLPEARHNGEFKERLIPVVKKFHAGLD
AIWMALAARRGADPEKTRTVMNTTMCLVRGMIAQTVLREDPSYFNEMLAFWKAQVAQHFPEEIASETRLASPSRSQSPAA
RASAATVAGK

Sequences:

>Translated_250_residues
MTVCKCNALLAMLSTVEVKAVAERRRRSQHERTAETSARLLNATIDLLHDNGFSRLSTPQIAAHAGVSRGALTHHFSSKE
ELITDAINDMLERVTADLHRFAEDIARRGGSSDEIVDYIWQMMSDRLFYVTMEYLPEARHNGEFKERLIPVVKKFHAGLD
AIWMALAARRGADPEKTRTVMNTTMCLVRGMIAQTVLREDPSYFNEMLAFWKAQVAQHFPEEIASETRLASPSRSQSPAA
RASAATVAGK
>Mature_249_residues
TVCKCNALLAMLSTVEVKAVAERRRRSQHERTAETSARLLNATIDLLHDNGFSRLSTPQIAAHAGVSRGALTHHFSSKEE
LITDAINDMLERVTADLHRFAEDIARRGGSSDEIVDYIWQMMSDRLFYVTMEYLPEARHNGEFKERLIPVVKKFHAGLDA
IWMALAARRGADPEKTRTVMNTTMCLVRGMIAQTVLREDPSYFNEMLAFWKAQVAQHFPEEIASETRLASPSRSQSPAAR
ASAATVAGK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27975; Mature: 27844

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVCKCNALLAMLSTVEVKAVAERRRRSQHERTAETSARLLNATIDLLHDNGFSRLSTPQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
IAAHAGVSRGALTHHFSSKEELITDAINDMLERVTADLHRFAEDIARRGGSSDEIVDYIW
HHHHCCCHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QMMSDRLFYVTMEYLPEARHNGEFKERLIPVVKKFHAGLDAIWMALAARRGADPEKTRTV
HHHHCHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
MNTTMCLVRGMIAQTVLREDPSYFNEMLAFWKAQVAQHFPEEIASETRLASPSRSQSPAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RASAATVAGK
HHHHHHCCCC
>Mature Secondary Structure 
TVCKCNALLAMLSTVEVKAVAERRRRSQHERTAETSARLLNATIDLLHDNGFSRLSTPQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
IAAHAGVSRGALTHHFSSKEELITDAINDMLERVTADLHRFAEDIARRGGSSDEIVDYIW
HHHHCCCHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QMMSDRLFYVTMEYLPEARHNGEFKERLIPVVKKFHAGLDAIWMALAARRGADPEKTRTV
HHHHCHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
MNTTMCLVRGMIAQTVLREDPSYFNEMLAFWKAQVAQHFPEEIASETRLASPSRSQSPAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RASAATVAGK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA