| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424623
Identifier: 158424623
GI number: 158424623
Start: 3429174
End: 3430406
Strand: Direct
Name: 158424623
Synonym: AZC_2999
Alternate gene names: NA
Gene position: 3429174-3430406 (Clockwise)
Preceding gene: 158424622
Following gene: 158424624
Centisome position: 63.86
GC content: 68.37
Gene sequence:
>1233_bases ATGGCCCTGCTGATCACCAATGCGCACATCGTCGACGGCACCTCTGCGGAGCGTGGCGAGAAGGTGGACGTTCTCGTCGA GGGCGATGTCATCCGCGAGGTGGCGCCGAAGATCGCCGCCGCCTCCGCCGAGGTGATCGACCTCAAGGGCCGCACGCTGA TGCCCGGCCTCATCGACGCCCATGTCCATACGATCGCCTGTCTCGCCGACCTCGGCGCCAACGCCAAGCTGCCGGACAGC CTGGTTGCCGTGCGCGCCATGAAGCTGCTGGGCGAAATGCTGATGCGCGGCTTCACCACCGTGCGCGATCTCGGCGGCGC CGACCGCGGCCTCAAGGTGGCGGCGGCCGAAGGCTTCCTCCCTGCCCCCCGCATCGTCATCTGCGGCAAGGCGCTGAGCC AGACCGGCGGCCATTGCGATTTCCGCGGCCCCTATGACGACCGCGAGACGACCCGCACCGGCTTCCGCCTCGGCGCCCTC GGCCGGGTGGTGGACGGCGTGCCGGAGATGCGCCGCGCCGCCCGCGAAGAGATCAAGGGCGGGGCGGATTTCATCAAGAT CATGGCCAATGGCGGCGTCGCCTCGCCGACCGATCCGATCCACTTCCTCGGCTTCGCCCGCGAGGAACTCCTCGCCGTGG TGGAAGAGGCTCAGAACGCCGGCACCTATGTCTCCGCCCATCTCTACACGGATGAAGGCATCCGCCGTGCGGTGGAATGC GGCGTCCATTCGCTGGAGCACTGCAACCTCATCAAGGCCGACACCGCCAAGTTCGCCGCAGAACAGGGCGCCATCGCCGT GCCGACGCTCGTGACCTACGACAAGCTGTCGAGCGAGGGCGCCGCCATGGGCTTCCCCGCGGGCTCGGTGGCCAAGATCG ACAACGTCCGCCTCGCCGGCATGGAATCCATCGCCATCATGCGCGCCGCTGGCCTGCCCATGGCCTATGGCTCGGATCTG CTGGGCGAGATGCACCGCCACCAGTCGGAGGAGTTCGTCATCCGCGGCCGTGTGCTGCCGGCGCATGAGGTGATCGCCTC CGCCACCACCATCGCCGCCAGGCTGCTGCGCATGGAAGGCCAGATCGGCACCGTTGCCCCCGGCGCTTTCGCCGACCTCA TCGCCGTCGATGGCGATCCCCTGAAGGACCTGTCCCTGCTCACGGGCCAGGGCCAGCACATGCCGCTCATCATGAAGGGC GGCGTCTGCGTGAAGCGTACCGCGCTCAACTGA
Upstream 100 bases:
>100_bases GCGAGACGCGCCTTGCCTCCCCTTCCCGTTCCCAATCCCCGGCCGCGCGCGCTTCGGCCGCGACGGTGGCGGGCAAATAG ACCTTCCGGAGTATCGAGAC
Downstream 100 bases:
>100_bases AAAACAAGCACAACCTCCAGACCGAAGGGATCGAAGCCGTGACCCTCTCCCGCCGCCAGACGCTCGCCGGCCTTGCCGGA GCCCTGCTTCTGCCCGCGCT
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MALLITNAHIVDGTSAERGEKVDVLVEGDVIREVAPKIAAASAEVIDLKGRTLMPGLIDAHVHTIACLADLGANAKLPDS LVAVRAMKLLGEMLMRGFTTVRDLGGADRGLKVAAAEGFLPAPRIVICGKALSQTGGHCDFRGPYDDRETTRTGFRLGAL GRVVDGVPEMRRAAREEIKGGADFIKIMANGGVASPTDPIHFLGFAREELLAVVEEAQNAGTYVSAHLYTDEGIRRAVEC GVHSLEHCNLIKADTAKFAAEQGAIAVPTLVTYDKLSSEGAAMGFPAGSVAKIDNVRLAGMESIAIMRAAGLPMAYGSDL LGEMHRHQSEEFVIRGRVLPAHEVIASATTIAARLLRMEGQIGTVAPGAFADLIAVDGDPLKDLSLLTGQGQHMPLIMKG GVCVKRTALN
Sequences:
>Translated_410_residues MALLITNAHIVDGTSAERGEKVDVLVEGDVIREVAPKIAAASAEVIDLKGRTLMPGLIDAHVHTIACLADLGANAKLPDS LVAVRAMKLLGEMLMRGFTTVRDLGGADRGLKVAAAEGFLPAPRIVICGKALSQTGGHCDFRGPYDDRETTRTGFRLGAL GRVVDGVPEMRRAAREEIKGGADFIKIMANGGVASPTDPIHFLGFAREELLAVVEEAQNAGTYVSAHLYTDEGIRRAVEC GVHSLEHCNLIKADTAKFAAEQGAIAVPTLVTYDKLSSEGAAMGFPAGSVAKIDNVRLAGMESIAIMRAAGLPMAYGSDL LGEMHRHQSEEFVIRGRVLPAHEVIASATTIAARLLRMEGQIGTVAPGAFADLIAVDGDPLKDLSLLTGQGQHMPLIMKG GVCVKRTALN >Mature_409_residues ALLITNAHIVDGTSAERGEKVDVLVEGDVIREVAPKIAAASAEVIDLKGRTLMPGLIDAHVHTIACLADLGANAKLPDSL VAVRAMKLLGEMLMRGFTTVRDLGGADRGLKVAAAEGFLPAPRIVICGKALSQTGGHCDFRGPYDDRETTRTGFRLGALG RVVDGVPEMRRAAREEIKGGADFIKIMANGGVASPTDPIHFLGFAREELLAVVEEAQNAGTYVSAHLYTDEGIRRAVECG VHSLEHCNLIKADTAKFAAEQGAIAVPTLVTYDKLSSEGAAMGFPAGSVAKIDNVRLAGMESIAIMRAAGLPMAYGSDLL GEMHRHQSEEFVIRGRVLPAHEVIASATTIAARLLRMEGQIGTVAPGAFADLIAVDGDPLKDLSLLTGQGQHMPLIMKGG VCVKRTALN
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=328, Percent_Identity=40.2439024390244, Blast_Score=236, Evalue=4e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 43182; Mature: 43050
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLITNAHIVDGTSAERGEKVDVLVEGDVIREVAPKIAAASAEVIDLKGRTLMPGLIDA CEEEEECCEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCEECCHHHHH HVHTIACLADLGANAKLPDSLVAVRAMKLLGEMLMRGFTTVRDLGGADRGLKVAAAEGFL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC PAPRIVICGKALSQTGGHCDFRGPYDDRETTRTGFRLGALGRVVDGVPEMRRAAREEIKG CCCCEEEECHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCC GADFIKIMANGGVASPTDPIHFLGFAREELLAVVEEAQNAGTYVSAHLYTDEGIRRAVEC CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH GVHSLEHCNLIKADTAKFAAEQGAIAVPTLVTYDKLSSEGAAMGFPAGSVAKIDNVRLAG HHHHHHHCCEEEHHHHHHHHCCCCEECCCEEEHHHHCCCCCCCCCCCCCCEEECCEEECC MESIAIMRAAGLPMAYGSDLLGEMHRHQSEEFVIRGRVLPAHEVIASATTIAARLLRMEG HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC QIGTVAPGAFADLIAVDGDPLKDLSLLTGQGQHMPLIMKGGVCVKRTALN CCCCCCCCHHHHEEEECCCCCCHHHHHCCCCCCCCEEEECCEEEEECCCC >Mature Secondary Structure ALLITNAHIVDGTSAERGEKVDVLVEGDVIREVAPKIAAASAEVIDLKGRTLMPGLIDA EEEEECCEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCEECCHHHHH HVHTIACLADLGANAKLPDSLVAVRAMKLLGEMLMRGFTTVRDLGGADRGLKVAAAEGFL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC PAPRIVICGKALSQTGGHCDFRGPYDDRETTRTGFRLGALGRVVDGVPEMRRAAREEIKG CCCCEEEECHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCC GADFIKIMANGGVASPTDPIHFLGFAREELLAVVEEAQNAGTYVSAHLYTDEGIRRAVEC CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH GVHSLEHCNLIKADTAKFAAEQGAIAVPTLVTYDKLSSEGAAMGFPAGSVAKIDNVRLAG HHHHHHHCCEEEHHHHHHHHCCCCEECCCEEEHHHHCCCCCCCCCCCCCCEEECCEEECC MESIAIMRAAGLPMAYGSDLLGEMHRHQSEEFVIRGRVLPAHEVIASATTIAARLLRMEG HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC QIGTVAPGAFADLIAVDGDPLKDLSLLTGQGQHMPLIMKGGVCVKRTALN CCCCCCCCHHHHEEEECCCCCCHHHHHCCCCCCCCEEEECCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]