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The map label for this gene is yajC [H]

Identifier: 158424519

GI number: 158424519

Start: 3307198

End: 3307542

Strand: Reverse

Name: yajC [H]

Synonym: AZC_2895

Alternate gene names: 158424519

Gene position: 3307542-3307198 (Counterclockwise)

Preceding gene: 158424524

Following gene: 158424518

Centisome position: 61.6

GC content: 63.19

Gene sequence:

>345_bases
ATGTTCATATCGCCCGCTTTCGCTCAAGGCGCCGCACCGGCTGCCGGCGGGGCCGACATGCTCATTCAGCTCGCGCCGTT
CGTGCTGATTTTCGTGGTGATGTACTTCCTCATCCTGCGCCCGCAGCAGAAGAAGGCGAAGGCCCATCAAGAGATGGTGA
ACTCGCTGCGCCGCGGCGACGTGGTCATCACCAACGGCGGCCTTGTGGGCAAGGTGGTCAAGGTGGTTGATGACGCCGAG
ATCGAGATGCAGATCGCCGACAATGTGAAGGTGCGCCAGCTGCGCTCCCAGATTGCCGTGGTCCGTTCCAAGGGCGAGCC
GGCCAAGGACGAGACGGCGGCCTGA

Upstream 100 bases:

>100_bases
TTTGCATTCGCGGGCGCCGCCGGTATAGTCCCGCCGCTTCGGCACGGGCGTCCGTCGTGGATTGGACCCATCCCTCCCTT
CAGAAGAGAACGAGGACACA

Downstream 100 bases:

>100_bases
CGCCGCCGCCCCCCGCCAGAACAAGACAGAGACGATGCTGCACTTCTCCAGGCTGAAGACGGCGCTGATCCTCCTGGTCA
CAGCGTTCGGAATCCTGTTC

Product: preprotein translocase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MFISPAFAQGAAPAAGGADMLIQLAPFVLIFVVMYFLILRPQQKKAKAHQEMVNSLRRGDVVITNGGLVGKVVKVVDDAE
IEMQIADNVKVRQLRSQIAVVRSKGEPAKDETAA

Sequences:

>Translated_114_residues
MFISPAFAQGAAPAAGGADMLIQLAPFVLIFVVMYFLILRPQQKKAKAHQEMVNSLRRGDVVITNGGLVGKVVKVVDDAE
IEMQIADNVKVRQLRSQIAVVRSKGEPAKDETAA
>Mature_114_residues
MFISPAFAQGAAPAAGGADMLIQLAPFVLIFVVMYFLILRPQQKKAKAHQEMVNSLRRGDVVITNGGLVGKVVKVVDDAE
IEMQIADNVKVRQLRSQIAVVRSKGEPAKDETAA

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=105, Percent_Identity=44.7619047619048, Blast_Score=86, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12304; Mature: 12304

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISPAFAQGAAPAAGGADMLIQLAPFVLIFVVMYFLILRPQQKKAKAHQEMVNSLRRGD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
VVITNGGLVGKVVKVVDDAEIEMQIADNVKVRQLRSQIAVVRSKGEPAKDETAA
EEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFISPAFAQGAAPAAGGADMLIQLAPFVLIFVVMYFLILRPQQKKAKAHQEMVNSLRRGD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
VVITNGGLVGKVVKVVDDAEIEMQIADNVKVRQLRSQIAVVRSKGEPAKDETAA
EEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]