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The map label for this gene is ygbL [H]

Identifier: 158424403

GI number: 158424403

Start: 3159940

End: 3160689

Strand: Direct

Name: ygbL [H]

Synonym: AZC_2779

Alternate gene names: 158424403

Gene position: 3159940-3160689 (Clockwise)

Preceding gene: 158424402

Following gene: 158424407

Centisome position: 58.85

GC content: 69.07

Gene sequence:

>750_bases
ATGAGCACCGCCGACGAAAATGCCCTGCGGGACGACATCTGCCGCTTCGCGCGTTCACTGTTCGAGCGCGGGCTTACCCC
CGGCTCATCGGGCAACATCTCGGTGCGGCTGGAGGATGGCGGCTGGCTGGTGACGCCCACCAATGCCTCCCTCGGCCATC
TCGACCCGGCCCGCCTCTCGCGCCTCGATGCTTCCGGCACCCTGCTCTCGGGCGACAAGCCCACCAAGGAAATCCCGCTC
CACGCCGCGCTCTACGAGACGCGCGGTTCCGCCCGCGCGGTGGTGCACCTGCACTCCACCCACGCGGTGGCGCTGACGCT
GCTGCCGGAGATCGACCCGCGCTCGGCCCTGCCGCCGCTGACGCCCTATTATCTGATGCGCGCCGGACAGACCGCCCTCG
TGCCCTACTACCGGCCCGGCGATCCGGCGGTGGCCGACGCCATCAAGGGGTTGGCCGGCCGGTATTCATCCGTCCTGCTG
TCGAACCACGGACCGGTGGTGGCGGGCGAGAGCCTGGAAGCCGCCGTCTTCGCCACGGAGGAACTGGAGGAGACCGCCAA
GCTCTATCTCCTCACCCGGAACGTGAACCCGCGCTATCTCTCGCGGGCGCAGGTCGATGACCTCGTCACCACCTTCAAGT
GCGAGATCGCCGATCCCGACGCGCTGGACCGGCAATGCCGCGCGCCCGATTGCCCGACACACGGCTTCGGCTTTCTCGGC
GGGATCGCACGCGAACCCGCCGAGGATTGA

Upstream 100 bases:

>100_bases
CTCGCCGCTCGCAACGCCCCGGCCCAGCGCATCGATCTCGGCTTCGAACTCATTGCGGGCGCTACCGCCTGAGGTTCACA
TCCAGCCACGGGAGACGGCC

Downstream 100 bases:

>100_bases
GAGCAGCCGGCCTCACGCGCCGCCGGGGAGCGGCGCGGCCGGATCGACGAGACCCGCCGTCCGCAGCTCCCGCCAGAAGT
CGGCCGGAACGACCTCGCGC

Product: aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSTADENALRDDICRFARSLFERGLTPGSSGNISVRLEDGGWLVTPTNASLGHLDPARLSRLDASGTLLSGDKPTKEIPL
HAALYETRGSARAVVHLHSTHAVALTLLPEIDPRSALPPLTPYYLMRAGQTALVPYYRPGDPAVADAIKGLAGRYSSVLL
SNHGPVVAGESLEAAVFATEELEETAKLYLLTRNVNPRYLSRAQVDDLVTTFKCEIADPDALDRQCRAPDCPTHGFGFLG
GIAREPAED

Sequences:

>Translated_249_residues
MSTADENALRDDICRFARSLFERGLTPGSSGNISVRLEDGGWLVTPTNASLGHLDPARLSRLDASGTLLSGDKPTKEIPL
HAALYETRGSARAVVHLHSTHAVALTLLPEIDPRSALPPLTPYYLMRAGQTALVPYYRPGDPAVADAIKGLAGRYSSVLL
SNHGPVVAGESLEAAVFATEELEETAKLYLLTRNVNPRYLSRAQVDDLVTTFKCEIADPDALDRQCRAPDCPTHGFGFLG
GIAREPAED
>Mature_248_residues
STADENALRDDICRFARSLFERGLTPGSSGNISVRLEDGGWLVTPTNASLGHLDPARLSRLDASGTLLSGDKPTKEIPLH
AALYETRGSARAVVHLHSTHAVALTLLPEIDPRSALPPLTPYYLMRAGQTALVPYYRPGDPAVADAIKGLAGRYSSVLLS
NHGPVVAGESLEAAVFATEELEETAKLYLLTRNVNPRYLSRAQVDDLVTTFKCEIADPDALDRQCRAPDCPTHGFGFLGG
IAREPAED

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=203, Percent_Identity=49.2610837438424, Blast_Score=197, Evalue=4e-52,
Organism=Escherichia coli, GI1789164, Length=190, Percent_Identity=31.0526315789474, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 26773; Mature: 26642

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTADENALRDDICRFARSLFERGLTPGSSGNISVRLEDGGWLVTPTNASLGHLDPARLS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHH
RLDASGTLLSGDKPTKEIPLHAALYETRGSARAVVHLHSTHAVALTLLPEIDPRSALPPL
HCCCCCCEECCCCCCCCCCHHHEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCC
TPYYLMRAGQTALVPYYRPGDPAVADAIKGLAGRYSSVLLSNHGPVVAGESLEAAVFATE
CHHHHHHCCCEEEECEECCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCEEEEEHH
ELEETAKLYLLTRNVNPRYLSRAQVDDLVTTFKCEIADPDALDRQCRAPDCPTHGFGFLG
HHHHCEEEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCCCCCHHHC
GIAREPAED
CCCCCCCCC
>Mature Secondary Structure 
STADENALRDDICRFARSLFERGLTPGSSGNISVRLEDGGWLVTPTNASLGHLDPARLS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHH
RLDASGTLLSGDKPTKEIPLHAALYETRGSARAVVHLHSTHAVALTLLPEIDPRSALPPL
HCCCCCCEECCCCCCCCCCHHHEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCC
TPYYLMRAGQTALVPYYRPGDPAVADAIKGLAGRYSSVLLSNHGPVVAGESLEAAVFATE
CHHHHHHCCCEEEECEECCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCEEEEEHH
ELEETAKLYLLTRNVNPRYLSRAQVDDLVTTFKCEIADPDALDRQCRAPDCPTHGFGFLG
HHHHCEEEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCCCCCHHHC
GIAREPAED
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]