| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424342
Identifier: 158424342
GI number: 158424342
Start: 3086832
End: 3087605
Strand: Direct
Name: 158424342
Synonym: AZC_2718
Alternate gene names: NA
Gene position: 3086832-3087605 (Clockwise)
Preceding gene: 158424341
Following gene: 158424343
Centisome position: 57.49
GC content: 66.15
Gene sequence:
>774_bases ATGTCAGCAGGCGCGGCAATGACAGGCCTACCTATTAATCACTCAATCAATAGACGAACCCTGCTGGCATCGACAGCAGC AGCCGTTCTGGTGGGTCTGACGCCCGCGCATGCGCGTTTTCTGTCAGGCGAAGTCCCCTGGGCGCCGGGTGCGGCAACGC CGCCGGAGCCCGCAACGCCCGGCGGCTGGCTCTTCTTCACGCCCGATGAGGCCCGCGCGGTGGAGGCCATCGTCGAGCGT CTCATCCCGGCCGACGAGCTGAGCCCCAGCGGCAAGGATGCGGGCTGTGCCGTCTTCATCGACCGCCAGCTCGCGGGCCC GTATGGCGCTGCCGAGCGGCTCTACATGAAGCCGCCCTTCGCCACCAATGCGGCGCCCGAATTCGGACCGCAGAGCCCCT TGTCACCGGCTCAGCAATATCGGGCGGGCCTCAAGGCGCTTGATGCGTGGTGCAAGGCCAACCGCGGCGGCAAATCCTTC GCCGATCTCTCGCCGACGGAGCGCGATACCGTCCTGACGGCGATGGAAAAGGGCGAAGCCAAATTCGAGGGCTTTGGTGC GCGGCCGCTTTTCAACCTGGTGCTGCAGAACACCATGGAAGGCTTCTTCGCCGACCCGCTCTACGGCGGCAACCGCGACA TGGTGGGCTGGAAGCTCATTGGCTTCCCCGGTGCCCGGTATGATTATCGCGACTTCATCGACCACGTGACCGATCCCTAC CCGCTTCCGCCCGTCGGCCTGCAGGGTCGCGCCGGCTGGACGCCGGGTCGCTGA
Upstream 100 bases:
>100_bases GACCCATTGCGATGCAGCACGATATCTGTGGCACAAGCCCGCTTTTTCCTTGCGACACCGGCCTGCTTGGCATTACTAAA AACTAAGGTAATGCGACAAT
Downstream 100 bases:
>100_bases TCGGACCCATCCCCTTCCCTCTCCCGGGCCGCCGCGCGCGGACCGACAGGATAGAACGATGGCGCGCAAGCTCCCCAAGA AAGACGTGGTGATCATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: GA 2-DH subunit 3; GADH subunit 3 [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSAGAAMTGLPINHSINRRTLLASTAAAVLVGLTPAHARFLSGEVPWAPGAATPPEPATPGGWLFFTPDEARAVEAIVER LIPADELSPSGKDAGCAVFIDRQLAGPYGAAERLYMKPPFATNAAPEFGPQSPLSPAQQYRAGLKALDAWCKANRGGKSF ADLSPTERDTVLTAMEKGEAKFEGFGARPLFNLVLQNTMEGFFADPLYGGNRDMVGWKLIGFPGARYDYRDFIDHVTDPY PLPPVGLQGRAGWTPGR
Sequences:
>Translated_257_residues MSAGAAMTGLPINHSINRRTLLASTAAAVLVGLTPAHARFLSGEVPWAPGAATPPEPATPGGWLFFTPDEARAVEAIVER LIPADELSPSGKDAGCAVFIDRQLAGPYGAAERLYMKPPFATNAAPEFGPQSPLSPAQQYRAGLKALDAWCKANRGGKSF ADLSPTERDTVLTAMEKGEAKFEGFGARPLFNLVLQNTMEGFFADPLYGGNRDMVGWKLIGFPGARYDYRDFIDHVTDPY PLPPVGLQGRAGWTPGR >Mature_256_residues SAGAAMTGLPINHSINRRTLLASTAAAVLVGLTPAHARFLSGEVPWAPGAATPPEPATPGGWLFFTPDEARAVEAIVERL IPADELSPSGKDAGCAVFIDRQLAGPYGAAERLYMKPPFATNAAPEFGPQSPLSPAQQYRAGLKALDAWCKANRGGKSFA DLSPTERDTVLTAMEKGEAKFEGFGARPLFNLVLQNTMEGFFADPLYGGNRDMVGWKLIGFPGARYDYRDFIDHVTDPYP LPPVGLQGRAGWTPGR
Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. The role of this subunit in the heterotrimer is not known [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006311 [H]
Pfam domain/function: NA
EC number: =1.1.99.3 [H]
Molecular weight: Translated: 27444; Mature: 27313
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGAAMTGLPINHSINRRTLLASTAAAVLVGLTPAHARFLSGEVPWAPGAATPPEPATP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC GGWLFFTPDEARAVEAIVERLIPADELSPSGKDAGCAVFIDRQLAGPYGAAERLYMKPPF CCEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCC ATNAAPEFGPQSPLSPAQQYRAGLKALDAWCKANRGGKSFADLSPTERDTVLTAMEKGEA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC KFEGFGARPLFNLVLQNTMEGFFADPLYGGNRDMVGWKLIGFPGARYDYRDFIDHVTDPY CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCC PLPPVGLQGRAGWTPGR CCCCCCCCCCCCCCCCC >Mature Secondary Structure SAGAAMTGLPINHSINRRTLLASTAAAVLVGLTPAHARFLSGEVPWAPGAATPPEPATP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC GGWLFFTPDEARAVEAIVERLIPADELSPSGKDAGCAVFIDRQLAGPYGAAERLYMKPPF CCEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCC ATNAAPEFGPQSPLSPAQQYRAGLKALDAWCKANRGGKSFADLSPTERDTVLTAMEKGEA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC KFEGFGARPLFNLVLQNTMEGFFADPLYGGNRDMVGWKLIGFPGARYDYRDFIDHVTDPY CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCC PLPPVGLQGRAGWTPGR CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9352901 [H]