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The map label for this gene is dctP [H]

Identifier: 158424314

GI number: 158424314

Start: 3049406

End: 3050422

Strand: Reverse

Name: dctP [H]

Synonym: AZC_2690

Alternate gene names: 158424314

Gene position: 3050422-3049406 (Counterclockwise)

Preceding gene: 158424317

Following gene: 158424313

Centisome position: 56.81

GC content: 64.11

Gene sequence:

>1017_bases
ATGCTGACGCTGTCGCGCCGCCAGTTCGTTGCCGCCGCCGGTGCTGCTTCCGCAGCCGGTCTCATGGGAATGCCGGGCCT
CGCGCGGGCGGCGGAGTATGAGCTTAAATACGCCAACAACCTGCCCATGACGCACCCGCTTAACATCCGCGCGCAGGAAT
TCGCCAAGCGCGTGGAGACCGAGACCAAGGGGCAGGTGACGATCCAGATCTTCCCTAACAACCAGCTCGGCGGCGACACC
GACATGCTGGCGCAGGTGCGCTCCGGCGGCGTCACCTTCTTCACCCCGTCCGCGCTCGTCATCGCGACGCTCGTGCCCTC
CGCCGCCATCAATGCGGTGGGCTTTGCCTTCGCCGATTACGATCAGGTGTGGAAGGCCATGGACGGCGCGCTCGGCGCCC
ATGTGCGCGGCGCCATCTCCAAGGTCGGCCTCTACGCCTTCGAGAAGATGTGGGACAATGGCTTCCGCCAGATGACCTCC
TCCAAGGCGCCCATCCAGACCGCCAAGGACATGGACGGCCTGAAGATCCGCGTGCCGGTCAGCCCGCTGTCGGTTTCCAT
GTTCAAGGCGCTCGGCGCTTCGCCCGCCAGCCTTCAGTTCTCGGAAGTCTATTCCGCGCTCCAGACCAAGATCGTGGATG
CGCAGGAAAATCCGCTGCCCATCATCCAGGTGGCGAAGCTCTATGAGGTGCAGAAGTACGCCTCGCTCACCAATCACATC
TGGGATGGCTACTGGTTCATCGCCAACGGCCGGGCCTGGCGCGAGATCCCGGAGAACTTCCAGAAGATCATCGCCACCGC
CATCAATGATGCGGGCCTGTCCCAGCGCGCCGACATCAAGAAGCTGAACGAGGGCGTGCAGGCGGACCTTGAGAAGAACG
GCCTCGCCTTCAACAGCACGAACCCCGACAGCTTCCGCGCCAAGCTGCGGGACAGCGGCTTCTATGTTGAGTGGAAGGGC
CGCTTCGGAGACGAGGTGTGGGGCCTTCTGGAAGGCGCCGTCGGCAAGCTCGCCTGA

Upstream 100 bases:

>100_bases
TCAAATTACATCATTATTTGAAATTGCCGGGCGCGGTTCAGGTTTTTATCCTCTCTCAGGATCAAGAAAGATACATCAAA
AAACATCAAGGGAGGATGCC

Downstream 100 bases:

>100_bases
GTTCCCTTTGACCTGACGTTTGATCGGAGGCGCCATGTCCGGCTCCTTGTCCCCAACGGCTGCCGAGAACGCGGCAGCCG
CCCGGTCGGCTGCGTCCGGC

Product: TRAP dicarboxylate transporter-DctP subunit

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLTLSRRQFVAAAGAASAAGLMGMPGLARAAEYELKYANNLPMTHPLNIRAQEFAKRVETETKGQVTIQIFPNNQLGGDT
DMLAQVRSGGVTFFTPSALVIATLVPSAAINAVGFAFADYDQVWKAMDGALGAHVRGAISKVGLYAFEKMWDNGFRQMTS
SKAPIQTAKDMDGLKIRVPVSPLSVSMFKALGASPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLYEVQKYASLTNHI
WDGYWFIANGRAWREIPENFQKIIATAINDAGLSQRADIKKLNEGVQADLEKNGLAFNSTNPDSFRAKLRDSGFYVEWKG
RFGDEVWGLLEGAVGKLA

Sequences:

>Translated_338_residues
MLTLSRRQFVAAAGAASAAGLMGMPGLARAAEYELKYANNLPMTHPLNIRAQEFAKRVETETKGQVTIQIFPNNQLGGDT
DMLAQVRSGGVTFFTPSALVIATLVPSAAINAVGFAFADYDQVWKAMDGALGAHVRGAISKVGLYAFEKMWDNGFRQMTS
SKAPIQTAKDMDGLKIRVPVSPLSVSMFKALGASPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLYEVQKYASLTNHI
WDGYWFIANGRAWREIPENFQKIIATAINDAGLSQRADIKKLNEGVQADLEKNGLAFNSTNPDSFRAKLRDSGFYVEWKG
RFGDEVWGLLEGAVGKLA
>Mature_338_residues
MLTLSRRQFVAAAGAASAAGLMGMPGLARAAEYELKYANNLPMTHPLNIRAQEFAKRVETETKGQVTIQIFPNNQLGGDT
DMLAQVRSGGVTFFTPSALVIATLVPSAAINAVGFAFADYDQVWKAMDGALGAHVRGAISKVGLYAFEKMWDNGFRQMTS
SKAPIQTAKDMDGLKIRVPVSPLSVSMFKALGASPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLYEVQKYASLTNHI
WDGYWFIANGRAWREIPENFQKIIATAINDAGLSQRADIKKLNEGVQADLEKNGLAFNSTNPDSFRAKLRDSGFYVEWKG
RFGDEVWGLLEGAVGKLA

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=273, Percent_Identity=31.8681318681319, Blast_Score=158, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36817; Mature: 36817

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLSRRQFVAAAGAASAAGLMGMPGLARAAEYELKYANNLPMTHPLNIRAQEFAKRVET
CCCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHCC
ETKGQVTIQIFPNNQLGGDTDMLAQVRSGGVTFFTPSALVIATLVPSAAINAVGFAFADY
CCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
DQVWKAMDGALGAHVRGAISKVGLYAFEKMWDNGFRQMTSSKAPIQTAKDMDGLKIRVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEECC
SPLSVSMFKALGASPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLYEVQKYASLTNHI
CHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WDGYWFIANGRAWREIPENFQKIIATAINDAGLSQRADIKKLNEGVQADLEKNGLAFNST
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC
NPDSFRAKLRDSGFYVEWKGRFGDEVWGLLEGAVGKLA
CCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTLSRRQFVAAAGAASAAGLMGMPGLARAAEYELKYANNLPMTHPLNIRAQEFAKRVET
CCCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHCC
ETKGQVTIQIFPNNQLGGDTDMLAQVRSGGVTFFTPSALVIATLVPSAAINAVGFAFADY
CCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
DQVWKAMDGALGAHVRGAISKVGLYAFEKMWDNGFRQMTSSKAPIQTAKDMDGLKIRVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEECC
SPLSVSMFKALGASPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLYEVQKYASLTNHI
CHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WDGYWFIANGRAWREIPENFQKIIATAINDAGLSQRADIKKLNEGVQADLEKNGLAFNST
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC
NPDSFRAKLRDSGFYVEWKGRFGDEVWGLLEGAVGKLA
CCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA