| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424280
Identifier: 158424280
GI number: 158424280
Start: 3009386
End: 3010210
Strand: Direct
Name: 158424280
Synonym: AZC_2656
Alternate gene names: NA
Gene position: 3009386-3010210 (Clockwise)
Preceding gene: 158424279
Following gene: 158424282
Centisome position: 56.04
GC content: 66.06
Gene sequence:
>825_bases ATGTGGACAGCAGAGCAGCGGGACCGGATGGCCAGGATCGCCCGGAAGACGAAACGCTATCCGTCGGACCTGACGGATGA GGAATGGGAGCGGATGGCGCCGTTGATGCCGGCTCCTGGGCGCCGGGGGCGCCCCCGCGAGGTGGAGTTCCGGGAAGTCA TCAATGCGGTGCGCTATCTGGTGCGTTCAGGCGGCGGCTGGCGGATGCTGCCGATCCATTTCGGACACTGGCGCACCGTC TACGGCTGGTTCCGCGAACTGGCGCGCCGCTTTCTGTTCCAGACCATCCACGATGTCGAACTGATGCTCGATCGCGAGCG GGCCGGGCGTGAGGCGAGCCCGACGGGGGCGGTGATCGACAGTCAGACGATCAAGGCGCCGCAAGCCGAAGCCAGGGGCT ACGATGCCGGCAAGAAGATCGTCGGGCGCAAGCGCCACATCGCGGTCGACACCGACGGGCGGCTCCTGATGGTCCATCTG ACGACCGCGGACATCTCCGACAGTGCCGGCGCACAGATGATCCTCGATGCGATCCGCAGGCGCTGGCCGTGGGTGAAGCA TCTCTTCGCCGACGCCGCCTACGACCGGCTCAAGCTCATGGACAAGGCCACCTATCTCGACTTCGTGGTCGAGATCATCC GCCGCCGCGATGGCGTGCAGGGCTTCGAAGTCCTGCCGCGACGCTGGGTCGTCGAGCGCACCTTCGGCTGGATGACCCGA TGGCGCCGCCTCGTGCGCGACTATGAGCGCCGCATCGACGTCTCAACGGCGATGATCCTCGTCGCGATGGGCGGAAATCT TGCCCGAAGAAATGCCCATCCGTGA
Upstream 100 bases:
>100_bases GGATGCGCCAGCGCGTATCCCGTCTGGCTGCCTAAGAGCCCGTTTGGAAATTCGTGATCCGGGGATTCCTGTTTGTCCGT GCTTATGATTCAAGCTCTGG
Downstream 100 bases:
>100_bases ATTTCCAAACGGGCTCTAAGAGGCCGCGGGAAAATCTAACTGCGGACCCGTGCCCGGCGCGGCGCCGCCGCATCACTCCT CGCGGCCGCCGTAAGGCTCT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; Transposase And Inactivated Derivatives-Like Protein; IS5 Family Transposase; Transposase Of; LOW QUALITY PROTEIN Transposase; IS4 Insertion Sequence Transposase Protein; Transposase Is4 Family Protein; Transposase-Like Protein; Transposase Fragment; Transposase Is4-Like Protein; Transposase And Inactivated Derivatives-Like; Transposase Protein; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; IS3/IS4 Family Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MWTAEQRDRMARIARKTKRYPSDLTDEEWERMAPLMPAPGRRGRPREVEFREVINAVRYLVRSGGGWRMLPIHFGHWRTV YGWFRELARRFLFQTIHDVELMLDRERAGREASPTGAVIDSQTIKAPQAEARGYDAGKKIVGRKRHIAVDTDGRLLMVHL TTADISDSAGAQMILDAIRRRWPWVKHLFADAAYDRLKLMDKATYLDFVVEIIRRRDGVQGFEVLPRRWVVERTFGWMTR WRRLVRDYERRIDVSTAMILVAMGGNLARRNAHP
Sequences:
>Translated_274_residues MWTAEQRDRMARIARKTKRYPSDLTDEEWERMAPLMPAPGRRGRPREVEFREVINAVRYLVRSGGGWRMLPIHFGHWRTV YGWFRELARRFLFQTIHDVELMLDRERAGREASPTGAVIDSQTIKAPQAEARGYDAGKKIVGRKRHIAVDTDGRLLMVHL TTADISDSAGAQMILDAIRRRWPWVKHLFADAAYDRLKLMDKATYLDFVVEIIRRRDGVQGFEVLPRRWVVERTFGWMTR WRRLVRDYERRIDVSTAMILVAMGGNLARRNAHP >Mature_274_residues MWTAEQRDRMARIARKTKRYPSDLTDEEWERMAPLMPAPGRRGRPREVEFREVINAVRYLVRSGGGWRMLPIHFGHWRTV YGWFRELARRFLFQTIHDVELMLDRERAGREASPTGAVIDSQTIKAPQAEARGYDAGKKIVGRKRHIAVDTDGRLLMVHL TTADISDSAGAQMILDAIRRRWPWVKHLFADAAYDRLKLMDKATYLDFVVEIIRRRDGVQGFEVLPRRWVVERTFGWMTR WRRLVRDYERRIDVSTAMILVAMGGNLARRNAHP
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32155; Mature: 32155
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTAEQRDRMARIARKTKRYPSDLTDEEWERMAPLMPAPGRRGRPREVEFREVINAVRYL CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH VRSGGGWRMLPIHFGHWRTVYGWFRELARRFLFQTIHDVELMLDRERAGREASPTGAVID HHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC SQTIKAPQAEARGYDAGKKIVGRKRHIAVDTDGRLLMVHLTTADISDSAGAQMILDAIRR CCCCCCCCHHHCCCCHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHH RWPWVKHLFADAAYDRLKLMDKATYLDFVVEIIRRRDGVQGFEVLPRRWVVERTFGWMTR HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WRRLVRDYERRIDVSTAMILVAMGGNLARRNAHP HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC >Mature Secondary Structure MWTAEQRDRMARIARKTKRYPSDLTDEEWERMAPLMPAPGRRGRPREVEFREVINAVRYL CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH VRSGGGWRMLPIHFGHWRTVYGWFRELARRFLFQTIHDVELMLDRERAGREASPTGAVID HHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC SQTIKAPQAEARGYDAGKKIVGRKRHIAVDTDGRLLMVHLTTADISDSAGAQMILDAIRR CCCCCCCCHHHCCCCHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHH RWPWVKHLFADAAYDRLKLMDKATYLDFVVEIIRRRDGVQGFEVLPRRWVVERTFGWMTR HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WRRLVRDYERRIDVSTAMILVAMGGNLARRNAHP HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA