| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158424279
GI number: 158424279
Start: 3007635
End: 3009269
Strand: Direct
Name: gsiB [H]
Synonym: AZC_2655
Alternate gene names: 158424279
Gene position: 3007635-3009269 (Clockwise)
Preceding gene: 158424278
Following gene: 158424280
Centisome position: 56.01
GC content: 65.69
Gene sequence:
>1635_bases ATGACCTCAGAGCTTGATCGCCTGCCCTTCGGTCCCATCTCCCGCCGCCTGTTCCTTGGCGGCGCGGGCGCTGCCGCCGC AACTTTGTTCATCGGCCAGAACGGCAAGGCCTTTGCCGCCGAGACCGGGCAGAAGGGCGGCACGCTCACCATGGCCGTGT GGCCGGACCCGACCGCGCTGGTGTGCGCCTTCACGTCTTCCGATCAGGTGGTGCTCTCCTCCGCCAAGATGACCGAGGGG CTCGTGGCCTATGGCTACGACTTCCTGCCCCGCCCGCGCCTTGCCACCGCGTGGGAGCCGTCCGCCGACGGTCTGTCCAT CAAGTTCACGCTCCGCCAGGGCGTGAAGTGGCATGACGGGACGGACTTCACCTCCGCCGACGTCGCCTTTTCCTTCCTCA ACCTGCTGAAGCCGAACCATCCGCGCGGGCGTGGCACCTTCGCCAACCTCACCGCCGTGGACACGCCGGACGCCCACACC GCCATCCTGCGCTTCTCCAAGCCCTCGCCGGTGGTCATGAACGCGCTGTCGGGCATGGAAAGCCCCATCCTGCCCAAGCA CATCTATGAGAATGGGGACCCGCTGCGGAACCCGGCCAACAACGCGCCCATCGGCACCGGCCCGTTCAAATTCGTGGAAT GGAAGCGCGGCAGCCACATCATCCTGGAGCGCTTCGACGGCTATTGGGCGCAGGAGCGGCCCTATCTCGACCGCATCGTG ATGCGCATCATCAACGATGCCGGTGCCCGCGCAGCAGCGCTGGAGACGGGAGAGATCCTGCTCGCCGGCCCCAATCCCGT GCCCTACAGCGAGTTGGCGCGCTTCCGTGCCAATCCGAAGTTCGACGTCGAGACACGCGGTGAGGAGCTTCTCCAGCACG CGCAGGCCATCGAGGTGAACCTGCGCAACCCCATCCTCGCCAAGGTGGAGGTGCGCCAGGCCATCCTTCAGGCGGTCAAC CGCGAGGCCATGGCCCGCGCGGTCTGGTATCAGAGCGGCCGTCCCGCCACGAGCCCGATCCCCTATCAGGCCGGCGACCT CAGGCTCGCCAATCCGCCCGCCTATCCCTTCGACGTCAAGAAGGCAGAAGCCCTGCTCGATGCCGCCGGCTATCCGCGCG GCGCGGACAAGATGCGCTTCAAACTGCGCCTCGACTGGCTGCCGCTCGGCGAAGCCAACCTGCGGGCGGCGGAATTCATC AAGCAGTCGCTCCAGCGGGTGGGCATCGACATCACCATCCGCTCCTCCGACCTGCCGACTTACCTCAAGACGATCTATGG CGACTATGATTACGACCTGAACGTTTTCCTCTACGCACCCATCTTCGACCCCTCCATGGGCCTCCAGCGCTTCTACTGGT CGAAGGCGGCCAAGCCGGGCTCGCCCTTCGTGATCGCCAGCGGCTATTCCAGCCCGGAGATGGACAAGATTCTCGAAAGC GCCTCCACGGAGATGGATCCGGCCAAGCGCAAGGCGCTGTTCCACGACTTCCAGCGCCTCGCCATGACCGACCTCCCCGT GCTGCCGCTGCTCGATCTCGATTACACCGCGATCATCAGCAAGCGCGTGCATGGCGTCATGGACATGCCGGAGGGCATCC GCGGCAGCTTCGAGAACGTCTGGCTCTCAGCCTGA
Upstream 100 bases:
>100_bases CCGCGTAGAGGTGACCGGTGCAGGCGAGGCCCGTTCCCCGTCCGAGATTCTCTCCCTTGAACCCATCACGGCGCCTGCGC CCGTCTGAACGAGACCCGTC
Downstream 100 bases:
>100_bases GGACGTTTCCCGGACGGGATGCGCCAGCGCGTATCCCGTCTGGCTGCCTAAGAGCCCGTTTGGAAATTCGTGATCCGGGG ATTCCTGTTTGTCCGTGCTT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MTSELDRLPFGPISRRLFLGGAGAAAATLFIGQNGKAFAAETGQKGGTLTMAVWPDPTALVCAFTSSDQVVLSSAKMTEG LVAYGYDFLPRPRLATAWEPSADGLSIKFTLRQGVKWHDGTDFTSADVAFSFLNLLKPNHPRGRGTFANLTAVDTPDAHT AILRFSKPSPVVMNALSGMESPILPKHIYENGDPLRNPANNAPIGTGPFKFVEWKRGSHIILERFDGYWAQERPYLDRIV MRIINDAGARAAALETGEILLAGPNPVPYSELARFRANPKFDVETRGEELLQHAQAIEVNLRNPILAKVEVRQAILQAVN REAMARAVWYQSGRPATSPIPYQAGDLRLANPPAYPFDVKKAEALLDAAGYPRGADKMRFKLRLDWLPLGEANLRAAEFI KQSLQRVGIDITIRSSDLPTYLKTIYGDYDYDLNVFLYAPIFDPSMGLQRFYWSKAAKPGSPFVIASGYSSPEMDKILES ASTEMDPAKRKALFHDFQRLAMTDLPVLPLLDLDYTAIISKRVHGVMDMPEGIRGSFENVWLSA
Sequences:
>Translated_544_residues MTSELDRLPFGPISRRLFLGGAGAAAATLFIGQNGKAFAAETGQKGGTLTMAVWPDPTALVCAFTSSDQVVLSSAKMTEG LVAYGYDFLPRPRLATAWEPSADGLSIKFTLRQGVKWHDGTDFTSADVAFSFLNLLKPNHPRGRGTFANLTAVDTPDAHT AILRFSKPSPVVMNALSGMESPILPKHIYENGDPLRNPANNAPIGTGPFKFVEWKRGSHIILERFDGYWAQERPYLDRIV MRIINDAGARAAALETGEILLAGPNPVPYSELARFRANPKFDVETRGEELLQHAQAIEVNLRNPILAKVEVRQAILQAVN REAMARAVWYQSGRPATSPIPYQAGDLRLANPPAYPFDVKKAEALLDAAGYPRGADKMRFKLRLDWLPLGEANLRAAEFI KQSLQRVGIDITIRSSDLPTYLKTIYGDYDYDLNVFLYAPIFDPSMGLQRFYWSKAAKPGSPFVIASGYSSPEMDKILES ASTEMDPAKRKALFHDFQRLAMTDLPVLPLLDLDYTAIISKRVHGVMDMPEGIRGSFENVWLSA >Mature_543_residues TSELDRLPFGPISRRLFLGGAGAAAATLFIGQNGKAFAAETGQKGGTLTMAVWPDPTALVCAFTSSDQVVLSSAKMTEGL VAYGYDFLPRPRLATAWEPSADGLSIKFTLRQGVKWHDGTDFTSADVAFSFLNLLKPNHPRGRGTFANLTAVDTPDAHTA ILRFSKPSPVVMNALSGMESPILPKHIYENGDPLRNPANNAPIGTGPFKFVEWKRGSHIILERFDGYWAQERPYLDRIVM RIINDAGARAAALETGEILLAGPNPVPYSELARFRANPKFDVETRGEELLQHAQAIEVNLRNPILAKVEVRQAILQAVNR EAMARAVWYQSGRPATSPIPYQAGDLRLANPPAYPFDVKKAEALLDAAGYPRGADKMRFKLRLDWLPLGEANLRAAEFIK QSLQRVGIDITIRSSDLPTYLKTIYGDYDYDLNVFLYAPIFDPSMGLQRFYWSKAAKPGSPFVIASGYSSPEMDKILESA STEMDPAKRKALFHDFQRLAMTDLPVLPLLDLDYTAIISKRVHGVMDMPEGIRGSFENVWLSA
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=506, Percent_Identity=26.0869565217391, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1789966, Length=477, Percent_Identity=27.6729559748428, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1787762, Length=449, Percent_Identity=25.6124721603563, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1789887, Length=494, Percent_Identity=25.1012145748988, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1787551, Length=454, Percent_Identity=23.3480176211454, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787495, Length=473, Percent_Identity=22.6215644820296, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87081878, Length=485, Percent_Identity=23.2989690721649, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI87082063, Length=430, Percent_Identity=24.1860465116279, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 60036; Mature: 59905
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSELDRLPFGPISRRLFLGGAGAAAATLFIGQNGKAFAAETGQKGGTLTMAVWPDPTAL CCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEE VCAFTSSDQVVLSSAKMTEGLVAYGYDFLPRPRLATAWEPSADGLSIKFTLRQGVKWHDG EEEECCCCCEEEECCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEECCC TDFTSADVAFSFLNLLKPNHPRGRGTFANLTAVDTPDAHTAILRFSKPSPVVMNALSGME CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCC SPILPKHIYENGDPLRNPANNAPIGTGPFKFVEWKRGSHIILERFDGYWAQERPYLDRIV CCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHH MRIINDAGARAAALETGEILLAGPNPVPYSELARFRANPKFDVETRGEELLQHAQAIEVN HHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEE LRNPILAKVEVRQAILQAVNREAMARAVWYQSGRPATSPIPYQAGDLRLANPPAYPFDVK CCCCEEEHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHH KAEALLDAAGYPRGADKMRFKLRLDWLPLGEANLRAAEFIKQSLQRVGIDITIRSSDLPT HHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCH YLKTIYGDYDYDLNVFLYAPIFDPSMGLQRFYWSKAAKPGSPFVIASGYSSPEMDKILES HHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHH ASTEMDPAKRKALFHDFQRLAMTDLPVLPLLDLDYTAIISKRVHGVMDMPEGIRGSFENV HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCE WLSA EECC >Mature Secondary Structure TSELDRLPFGPISRRLFLGGAGAAAATLFIGQNGKAFAAETGQKGGTLTMAVWPDPTAL CCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEE VCAFTSSDQVVLSSAKMTEGLVAYGYDFLPRPRLATAWEPSADGLSIKFTLRQGVKWHDG EEEECCCCCEEEECCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEECCC TDFTSADVAFSFLNLLKPNHPRGRGTFANLTAVDTPDAHTAILRFSKPSPVVMNALSGME CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCC SPILPKHIYENGDPLRNPANNAPIGTGPFKFVEWKRGSHIILERFDGYWAQERPYLDRIV CCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHH MRIINDAGARAAALETGEILLAGPNPVPYSELARFRANPKFDVETRGEELLQHAQAIEVN HHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEE LRNPILAKVEVRQAILQAVNREAMARAVWYQSGRPATSPIPYQAGDLRLANPPAYPFDVK CCCCEEEHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHH KAEALLDAAGYPRGADKMRFKLRLDWLPLGEANLRAAEFIKQSLQRVGIDITIRSSDLPT HHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCH YLKTIYGDYDYDLNVFLYAPIFDPSMGLQRFYWSKAAKPGSPFVIASGYSSPEMDKILES HHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHH ASTEMDPAKRKALFHDFQRLAMTDLPVLPLLDLDYTAIISKRVHGVMDMPEGIRGSFENV HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCE WLSA EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA