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The map label for this gene is ycdL [C]

Identifier: 158424088

GI number: 158424088

Start: 2798849

End: 2799553

Strand: Reverse

Name: ycdL [C]

Synonym: AZC_2464

Alternate gene names: 158424088

Gene position: 2799553-2798849 (Counterclockwise)

Preceding gene: 158424090

Following gene: 158424087

Centisome position: 52.14

GC content: 65.39

Gene sequence:

>705_bases
ATGGCTTTCGATGCGGAACTCGACGCAGCCCTTTCGGCTGCCTTCGGCAAGGCGAGCGAACTCTATCAGCGCAACGGCTT
CCAGCGCCGTGTCGGCTTCGGCCGGCGGCCCGCGCTGATCAATGTGGATCTCGCCAATGCCTGGACGCGCCCCGGCAATC
CCTTCACCTGCGAGAAGATCGACGAGGAGATCATTCCGGGCGTGCAGGCGCTGCTGGCCGCGTGCCGCCGCAACGGCCAT
CCCGTGGTTCATGTCACGACCTGCTATCAGGTGACCGACCGCGCCAGCGATGCCACGGACATGGGGCTCTGGCACCAGAA
GATCCCGGTCGAAGTGGTGGCTCAGGACAAGCCGGACCTCTGGGCCATCGACAGCCGCATCGAGCCGGTGCCGGGCGAAC
AGGTTCTCATCAAGAAGCGCGCCTCGGCCTTCCATGGCACCTATCTTGCCGGCTTCCTGCGCGCCAACAATGTGGACACC
ATCCTCGTCACCGGCGTCACCGCTTCCGCCTGCGTGCGCACGACGTTGTGCGACGGGCTTGCGGAAGGCTTCCGCACCAT
TGCGGTGAAGGAATGCATCGGTGATCGCGTGCCGGGTGCGGTGGCCTGGAACCTGTTCGATATCGACGCCAAGTTCGCCG
ATGTGGAGCCCCTGTCGCGCTGCATCGCCTATCTGGACGACGTGGGTACGCGCGCTGCCGCCTGA

Upstream 100 bases:

>100_bases
CAATAGCGAAGAAATTAGAATTTCCAATTCTCGATCGAACGGCCCCATCGTTGCGGTCAAGCGCAGCAACAACAGCGCGA
ACCTCCAGAGGACGACAGCG

Downstream 100 bases:

>100_bases
GGCCGGTCCGTCCACGAGGCGCGCGCTCCGTGCGCGCCTCTTCGCCACGCACGCATCATAAAAATCCAGAGGCGGACATG
ACGAAGACGACTACTCCCTT

Product: hydrolase

Products: NA

Alternate protein names: N-carbamoylsarcosine amidohydrolase; CSHase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAFDAELDAALSAAFGKASELYQRNGFQRRVGFGRRPALINVDLANAWTRPGNPFTCEKIDEEIIPGVQALLAACRRNGH
PVVHVTTCYQVTDRASDATDMGLWHQKIPVEVVAQDKPDLWAIDSRIEPVPGEQVLIKKRASAFHGTYLAGFLRANNVDT
ILVTGVTASACVRTTLCDGLAEGFRTIAVKECIGDRVPGAVAWNLFDIDAKFADVEPLSRCIAYLDDVGTRAAA

Sequences:

>Translated_234_residues
MAFDAELDAALSAAFGKASELYQRNGFQRRVGFGRRPALINVDLANAWTRPGNPFTCEKIDEEIIPGVQALLAACRRNGH
PVVHVTTCYQVTDRASDATDMGLWHQKIPVEVVAQDKPDLWAIDSRIEPVPGEQVLIKKRASAFHGTYLAGFLRANNVDT
ILVTGVTASACVRTTLCDGLAEGFRTIAVKECIGDRVPGAVAWNLFDIDAKFADVEPLSRCIAYLDDVGTRAAA
>Mature_233_residues
AFDAELDAALSAAFGKASELYQRNGFQRRVGFGRRPALINVDLANAWTRPGNPFTCEKIDEEIIPGVQALLAACRRNGHP
VVHVTTCYQVTDRASDATDMGLWHQKIPVEVVAQDKPDLWAIDSRIEPVPGEQVLIKKRASAFHGTYLAGFLRANNVDTI
LVTGVTASACVRTTLCDGLAEGFRTIAVKECIGDRVPGAVAWNLFDIDAKFADVEPLSRCIAYLDDVGTRAAA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.59 [H]

Molecular weight: Translated: 25401; Mature: 25270

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDAELDAALSAAFGKASELYQRNGFQRRVGFGRRPALINVDLANAWTRPGNPFTCEKI
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEHHHCCCCCCCCEEHHHH
DEEIIPGVQALLAACRRNGHPVVHVTTCYQVTDRASDATDMGLWHQKIPVEVVAQDKPDL
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCE
WAIDSRIEPVPGEQVLIKKRASAFHGTYLAGFLRANNVDTILVTGVTASACVRTTLCDGL
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
AEGFRTIAVKECIGDRVPGAVAWNLFDIDAKFADVEPLSRCIAYLDDVGTRAAA
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
AFDAELDAALSAAFGKASELYQRNGFQRRVGFGRRPALINVDLANAWTRPGNPFTCEKI
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEHHHCCCCCCCCEEHHHH
DEEIIPGVQALLAACRRNGHPVVHVTTCYQVTDRASDATDMGLWHQKIPVEVVAQDKPDL
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCE
WAIDSRIEPVPGEQVLIKKRASAFHGTYLAGFLRANNVDTILVTGVTASACVRTTLCDGL
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
AEGFRTIAVKECIGDRVPGAVAWNLFDIDAKFADVEPLSRCIAYLDDVGTRAAA
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1381445; 8913306 [H]