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The map label for this gene is fabF [H]

Identifier: 158424029

GI number: 158424029

Start: 2731663

End: 2732862

Strand: Direct

Name: fabF [H]

Synonym: AZC_2405

Alternate gene names: 158424029

Gene position: 2731663-2732862 (Clockwise)

Preceding gene: 158424028

Following gene: 158424030

Centisome position: 50.87

GC content: 69.67

Gene sequence:

>1200_bases
ATGCATGACGACAGGAAGCCGGGCCAGCGCGACGTCTGGATCACCGGCATCGGCCTTGTCACCTCGCTTGGCGAGGGACT
GGACGCCCACTGGACAGCGCTGGCTGAAGGCGCGACCCCGGTTGTCGATACAGAGAGCTTCAAGCCCTACATCGTCCATC
CGCTGGTCAAGCTGAACTATGACCAGCAGATCCCCAAGAAGGGCGATCAGCGGCAGATGGAGGCGTGGCAGCGCATCGGC
ACCTATGCGGCCGGCCTTGCGCTCGATTCCGCCGGCATCGCCAAGAACCCGGAGATCCTCGGCCGCACCGACATGGTCGT
GGCCGCCGGCGGCGGCGAGCGCGACTTCCAGGTGGACGCGGCGATCCTCAACGATCTGCTGGCCTCCAACGACTGGGGCC
GCTCGCTGAACGAGCGTCTGCTCTCGGACCTGCGCCCCACCCTGTCGCTGGCCCAGCTCTCCAACCTGCTCGCCGGCAAC
ATCTCCATCGTGCACGGCGTCACCGGCTCCTCGCGCACCTTCATGGGCGAGGAGAGCGCCGGTGTGGACGCGGCGCGCGT
CGCCTATTCGCGCATTGCCGCCGGCCAGAGCGAGATCGGCCTCGTGGGCGGTGCCTACAATGCCGAGCGCGAGGACATGC
TCCTCCTCTATGCGCTCAACGACCTGTGCATGACCGGCGACTACCGGCCGGTGTTGGGTGCCGAGACCGCGCCCGGCATT
CCGTCCGGCTCCATGGGCGCCTTCCTCGTCCTCGAATCGCCCGAGCACGCCACGGCCCGTGGCGCCAAGCCCATCGCCAA
GCTGTCCGGCGTATGGTCCGAACGCGCCCGCCGCACTGAGGCGGGAACGGTCGCCGCCAAGGTGGGCGAGTTGATTGCCG
ACGCCGGCAAGACGCCGGGCACGGTCGTTTATTCGGCCGCCACCGGTGCGCCCGGCGCGACGGAAGCCGAGGGCGAGGCG
CTCAAGGCGGCCGGCCTCCCGGTGCGCGTCGCGACCAATCGCATTGGCCATGGCTTCGAGGCGCAGTTCTCCGCGGTGAT
CGCGCTTGCCGCGCTCAGCCTGTCACGCGGTGCGGCCATCGCCCCGCTCGCGGCCTCGCCGCTCGAGACGGCTCAGGATG
GCGCGCTGGAGCGCGTCATCGTCACCTCCGTCGGCCATTGGCGCGGCGAAGGCGCGGCGCTGGTCGAGAAGGCTGGCTGA

Upstream 100 bases:

>100_bases
GAGCTGGTGTTCCGCGTCCTGCCCTGGCCGGAGGGCCGCATGAAGGACGTGGTGCTGAAGGTGGCCGAGCGCGTGGAATT
CCCGCTGGCGGACTTCGCCG

Downstream 100 bases:

>100_bases
GGCAGACCGCTCGCGCGGCGATCTTCAGAGTTATGCGGGCCGCCCGGATGTTTTTCGTCCGGGCGGCTTCGTTTCAAGGG
TGAAAAATCGCTCCGGCGCA

Product: 3-oxoacyl-(acyl carrier protein) synthase II

Products: NA

Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase II; KAS II [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MHDDRKPGQRDVWITGIGLVTSLGEGLDAHWTALAEGATPVVDTESFKPYIVHPLVKLNYDQQIPKKGDQRQMEAWQRIG
TYAAGLALDSAGIAKNPEILGRTDMVVAAGGGERDFQVDAAILNDLLASNDWGRSLNERLLSDLRPTLSLAQLSNLLAGN
ISIVHGVTGSSRTFMGEESAGVDAARVAYSRIAAGQSEIGLVGGAYNAEREDMLLLYALNDLCMTGDYRPVLGAETAPGI
PSGSMGAFLVLESPEHATARGAKPIAKLSGVWSERARRTEAGTVAAKVGELIADAGKTPGTVVYSAATGAPGATEAEGEA
LKAAGLPVRVATNRIGHGFEAQFSAVIALAALSLSRGAAIAPLAASPLETAQDGALERVIVTSVGHWRGEGAALVEKAG

Sequences:

>Translated_399_residues
MHDDRKPGQRDVWITGIGLVTSLGEGLDAHWTALAEGATPVVDTESFKPYIVHPLVKLNYDQQIPKKGDQRQMEAWQRIG
TYAAGLALDSAGIAKNPEILGRTDMVVAAGGGERDFQVDAAILNDLLASNDWGRSLNERLLSDLRPTLSLAQLSNLLAGN
ISIVHGVTGSSRTFMGEESAGVDAARVAYSRIAAGQSEIGLVGGAYNAEREDMLLLYALNDLCMTGDYRPVLGAETAPGI
PSGSMGAFLVLESPEHATARGAKPIAKLSGVWSERARRTEAGTVAAKVGELIADAGKTPGTVVYSAATGAPGATEAEGEA
LKAAGLPVRVATNRIGHGFEAQFSAVIALAALSLSRGAAIAPLAASPLETAQDGALERVIVTSVGHWRGEGAALVEKAG
>Mature_399_residues
MHDDRKPGQRDVWITGIGLVTSLGEGLDAHWTALAEGATPVVDTESFKPYIVHPLVKLNYDQQIPKKGDQRQMEAWQRIG
TYAAGLALDSAGIAKNPEILGRTDMVVAAGGGERDFQVDAAILNDLLASNDWGRSLNERLLSDLRPTLSLAQLSNLLAGN
ISIVHGVTGSSRTFMGEESAGVDAARVAYSRIAAGQSEIGLVGGAYNAEREDMLLLYALNDLCMTGDYRPVLGAETAPGI
PSGSMGAFLVLESPEHATARGAKPIAKLSGVWSERARRTEAGTVAAKVGELIADAGKTPGTVVYSAATGAPGATEAEGEA
LKAAGLPVRVATNRIGHGFEAQFSAVIALAALSLSRGAAIAPLAASPLETAQDGALERVIVTSVGHWRGEGAALVEKAG

Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthes

COG id: COG0304

COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017568
- InterPro:   IPR000794
- InterPro:   IPR018201
- InterPro:   IPR014031
- InterPro:   IPR014030
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]

EC number: =2.3.1.179 [H]

Molecular weight: Translated: 41422; Mature: 41422

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDDRKPGQRDVWITGIGLVTSLGEGLDAHWTALAEGATPVVDTESFKPYIVHPLVKLNY
CCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHCCCCCCEECCCCCCEEECCEEEECC
DQQIPKKGDQRQMEAWQRIGTYAAGLALDSAGIAKNPEILGRTDMVVAAGGGERDFQVDA
CCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEHH
AILNDLLASNDWGRSLNERLLSDLRPTLSLAQLSNLLAGNISIVHGVTGSSRTFMGEESA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEECCCCCC
GVDAARVAYSRIAAGQSEIGLVGGAYNAEREDMLLLYALNDLCMTGDYRPVLGAETAPGI
CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCCC
PSGSMGAFLVLESPEHATARGAKPIAKLSGVWSERARRTEAGTVAAKVGELIADAGKTPG
CCCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVVYSAATGAPGATEAEGEALKAAGLPVRVATNRIGHGFEAQFSAVIALAALSLSRGAAI
EEEEEECCCCCCCCCCCCCHHHHCCCEEEEECHHCCCCHHHHHHHHHHHHHHHHCCCCEE
APLAASPLETAQDGALERVIVTSVGHWRGEGAALVEKAG
CCCCCCCHHHHHCCHHHHHEEHHCCCCCCCCCEEEECCC
>Mature Secondary Structure
MHDDRKPGQRDVWITGIGLVTSLGEGLDAHWTALAEGATPVVDTESFKPYIVHPLVKLNY
CCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHCCCCCCEECCCCCCEEECCEEEECC
DQQIPKKGDQRQMEAWQRIGTYAAGLALDSAGIAKNPEILGRTDMVVAAGGGERDFQVDA
CCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEHH
AILNDLLASNDWGRSLNERLLSDLRPTLSLAQLSNLLAGNISIVHGVTGSSRTFMGEESA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEECCCCCC
GVDAARVAYSRIAAGQSEIGLVGGAYNAEREDMLLLYALNDLCMTGDYRPVLGAETAPGI
CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCCC
PSGSMGAFLVLESPEHATARGAKPIAKLSGVWSERARRTEAGTVAAKVGELIADAGKTPG
CCCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVVYSAATGAPGATEAEGEALKAAGLPVRVATNRIGHGFEAQFSAVIALAALSLSRGAAI
EEEEEECCCCCCCCCCCCCHHHHCCCEEEEECHHCCCCHHHHHHHHHHHHHHHHCCCCEE
APLAASPLETAQDGALERVIVTSVGHWRGEGAALVEKAG
CCCCCCCHHHHHCCHHHHHEEHHCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8550484 [H]