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The map label for this gene is cycA [H]

Identifier: 158423929

GI number: 158423929

Start: 2630072

End: 2630467

Strand: Reverse

Name: cycA [H]

Synonym: AZC_2305

Alternate gene names: 158423929

Gene position: 2630467-2630072 (Counterclockwise)

Preceding gene: 158423930

Following gene: 229595716

Centisome position: 48.99

GC content: 63.38

Gene sequence:

>396_bases
ATGACTCGTATTCTGCTTGCTGTTCTGGCCCTTGCGGCCTCCACGGCGCTGGCGTCCGCCGATGCGGACGTGGCCAAGGG
CGAACAGGCGTTCAAGAAGTGCATGGCCTGCCATGCCGTCGGCCCCGAAGCCAAGACCAAGGTCGGCCCGCCTCTGAACG
GCATCGTCGGCGCCAAGTGGGCCCATTTCGAGGGCTATGCCTATTCCGAGGACATCAAGGCTGGCGCTGCCGCGGGCAAG
GTGTGGGACGAGGCGACCCTCAACGACTACCTGACCAATCCCAAGGTTCTCGCTCCCAAGGGCAAGATGGCGTTCATCGG
CATCAAGAACGAAGCCGAGCGCGCCGACCTCATCGCCTATCTGGCGCAGTTCAACGCCGACGGGTCGAAGAAGTGA

Upstream 100 bases:

>100_bases
GCCGCCAAGGCGCGGCCCTCTGCCACTTGGAAGAGATCCAAACCGGGCTATATCGTGCGCCTTCGCTGCGGCTCGTGCCG
CATGCTCAGAAGGACCGCAC

Downstream 100 bases:

>100_bases
TCCTTGCGTCACCCATACGGGTGATGTGCGACCGGCGCTGATTTGCAATGGTTCTAAAGCCGGTCAGGCGCGTAGGTCGT
GCGGGGGGCGCCCCGGCGGT

Product: cytochrome c protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTRILLAVLALAASTALASADADVAKGEQAFKKCMACHAVGPEAKTKVGPPLNGIVGAKWAHFEGYAYSEDIKAGAAAGK
VWDEATLNDYLTNPKVLAPKGKMAFIGIKNEAERADLIAYLAQFNADGSKK

Sequences:

>Translated_131_residues
MTRILLAVLALAASTALASADADVAKGEQAFKKCMACHAVGPEAKTKVGPPLNGIVGAKWAHFEGYAYSEDIKAGAAAGK
VWDEATLNDYLTNPKVLAPKGKMAFIGIKNEAERADLIAYLAQFNADGSKK
>Mature_130_residues
TRILLAVLALAASTALASADADVAKGEQAFKKCMACHAVGPEAKTKVGPPLNGIVGAKWAHFEGYAYSEDIKAGAAAGKV
WDEATLNDYLTNPKVLAPKGKMAFIGIKNEAERADLIAYLAQFNADGSKK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=103, Percent_Identity=46.6019417475728, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17566554, Length=102, Percent_Identity=43.1372549019608, Blast_Score=82, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17539604, Length=100, Percent_Identity=43, Blast_Score=79, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=100, Percent_Identity=45, Blast_Score=85, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6320796, Length=99, Percent_Identity=41.4141414141414, Blast_Score=82, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17137228, Length=101, Percent_Identity=46.5346534653465, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17137204, Length=107, Percent_Identity=42.9906542056075, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13724; Mature: 13593

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRILLAVLALAASTALASADADVAKGEQAFKKCMACHAVGPEAKTKVGPPLNGIVGAKW
CHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
AHFEGYAYSEDIKAGAAAGKVWDEATLNDYLTNPKVLAPKGKMAFIGIKNEAERADLIAY
ECCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHH
LAQFNADGSKK
HHHHCCCCCCC
>Mature Secondary Structure 
TRILLAVLALAASTALASADADVAKGEQAFKKCMACHAVGPEAKTKVGPPLNGIVGAKW
HHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
AHFEGYAYSEDIKAGAAAGKVWDEATLNDYLTNPKVLAPKGKMAFIGIKNEAERADLIAY
ECCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHH
LAQFNADGSKK
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697576; 174109; 7674304 [H]