| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is folD
Identifier: 158423930
GI number: 158423930
Start: 2630612
End: 2631484
Strand: Reverse
Name: folD
Synonym: AZC_2306
Alternate gene names: 158423930
Gene position: 2631484-2630612 (Counterclockwise)
Preceding gene: 158423931
Following gene: 158423929
Centisome position: 49.01
GC content: 68.38
Gene sequence:
>873_bases GTGATCGAGACCAAGCCCATCGACGGAAAGGCGTTCGCCGCTGGCCTGCGCGCCCGCATTGCCGAAGAGGTCGCCGTACT GGTGCGGGACCATGACCTGAAGCCCGGTCTCGCGGTGGTGCTGGTGGGCGAGGACCCGGCGAGCCAGGTCTATGTGCGCA ACAAGGCCGCCCAGACGGCGGAGGCCGGCATGGCCTCATTCGAGTACAAGCTGCCGGCCGACACGGCGGAAGCCGACCTT CTGGCGCTGGTGGAAAAGCTCAACGCCGATCCGGCGGTGAACGGCATTCTCGTGCAGCTTCCGCTGCCGGCCCATCTCGA TTCCATGAAGGTCCTGGCCGCCATCGATCCGGCAAAGGATGTGGACGGCTTCCATGTGGTGAATGCCGGCCGCCTCGCGG TGGGCCTCGACGCCCTCGTGCCCTGCACGCCGCTCGGCTGCGTGATGCTGCTGAAGCATCACCTGGGCAATCTCTCCGGG CTCAATGCCGTGGTGGTTGGGCGCTCCAACATCGTCGGCAAGCCGGCGGCGCAGCTTCTGCTGCGGGAGGACTGCACCGT TACGATCGCCCATTCGCGCACCCGCGATCTGCCGGGCATGTGCCGCCAGGCTGACATTCTGGTTGCCGCCGTCGGCCGCC CGGAGATGGTGCGGGGCGACTGGATCAAGCCCGGTGCCACGGTCATCGACGTCGGCATCAACCGCGTGCCGAAGGCGGAC GGCAAGACGCGCCTTGTGGGCGATGTGGCCTATGAGGAGGCGCTGGGCGTCGCCGGCCTCATCACGCCCGTGCCCGGCGG CGTCGGCCCCATGACCATCGCCTGCCTTCTCCAGAACACCCTCACCGCCGCCCGCCGCCAGAAGGGGCTCTGA
Upstream 100 bases:
>100_bases CGTTGCCTGAGCGCAGGGGAGGGGCGCGCCTTTTGGGGTTGCACCGTTCCGCCTTGCCGCCCAGAACACGCTCGCCTTCA CAAGCCCCGAGGATCGCTCC
Downstream 100 bases:
>100_bases GTCCGCGCGTGGCCCCCGGCAGGGCGCGCATGTCGCAGGGCCGCGCCGCCAAGGCGCGGCCCTCTGCCACTTGGAAGAGA TCCAAACCGGGCTATATCGT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIETKPIDGKAFAAGLRARIAEEVAVLVRDHDLKPGLAVVLVGEDPASQVYVRNKAAQTAEAGMASFEYKLPADTAEADL LALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGNLSG LNAVVVGRSNIVGKPAAQLLLREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATVIDVGINRVPKAD GKTRLVGDVAYEEALGVAGLITPVPGGVGPMTIACLLQNTLTAARRQKGL
Sequences:
>Translated_290_residues MIETKPIDGKAFAAGLRARIAEEVAVLVRDHDLKPGLAVVLVGEDPASQVYVRNKAAQTAEAGMASFEYKLPADTAEADL LALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGNLSG LNAVVVGRSNIVGKPAAQLLLREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATVIDVGINRVPKAD GKTRLVGDVAYEEALGVAGLITPVPGGVGPMTIACLLQNTLTAARRQKGL >Mature_290_residues MIETKPIDGKAFAAGLRARIAEEVAVLVRDHDLKPGLAVVLVGEDPASQVYVRNKAAQTAEAGMASFEYKLPADTAEADL LALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGNLSG LNAVVVGRSNIVGKPAAQLLLREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATVIDVGINRVPKAD GKTRLVGDVAYEEALGVAGLITPVPGGVGPMTIACLLQNTLTAARRQKGL
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=288, Percent_Identity=46.5277777777778, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI222418558, Length=291, Percent_Identity=44.3298969072165, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI94721354, Length=291, Percent_Identity=44.6735395189003, Blast_Score=211, Evalue=5e-55, Organism=Homo sapiens, GI36796743, Length=215, Percent_Identity=32.5581395348837, Blast_Score=92, Evalue=5e-19, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=51.9713261648746, Blast_Score=271, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17568735, Length=290, Percent_Identity=42.7586206896552, Blast_Score=215, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6319558, Length=286, Percent_Identity=45.8041958041958, Blast_Score=252, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6321643, Length=295, Percent_Identity=45.0847457627119, Blast_Score=236, Evalue=2e-63, Organism=Drosophila melanogaster, GI17136816, Length=292, Percent_Identity=50.6849315068493, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=50.6849315068493, Blast_Score=262, Evalue=2e-70, Organism=Drosophila melanogaster, GI24645718, Length=293, Percent_Identity=48.8054607508532, Blast_Score=255, Evalue=3e-68, Organism=Drosophila melanogaster, GI17137370, Length=293, Percent_Identity=48.8054607508532, Blast_Score=255, Evalue=3e-68, Organism=Drosophila melanogaster, GI62472483, Length=293, Percent_Identity=48.8054607508532, Blast_Score=255, Evalue=3e-68, Organism=Drosophila melanogaster, GI45551871, Length=293, Percent_Identity=48.8054607508532, Blast_Score=255, Evalue=3e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_AZOC5 (A8I5P5)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001525222.1 - ProteinModelPortal: A8I5P5 - SMR: A8I5P5 - GeneID: 5689627 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_2306 - HOGENOM: HBG328751 - OMA: CLMMLRD - ProtClustDB: PRK14188 - BioCyc: ACAU438753:AZC_2306-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30301; Mature: 30301
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETKPIDGKAFAAGLRARIAEEVAVLVRDHDLKPGLAVVLVGEDPASQVYVRNKAAQTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECHHHHHH EAGMASFEYKLPADTAEADLLALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKD HHCHHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCC VDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGNLSGLNAVVVGRSNIVGKPAAQLL CCCEEEEECCCEEECHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHH LREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATVIDVGINRVPKAD HHCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCCEECCCCCCCCCEEEECCCCCCCCCC GKTRLVGDVAYEEALGVAGLITPVPGGVGPMTIACLLQNTLTAARRQKGL CCEEEEHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIETKPIDGKAFAAGLRARIAEEVAVLVRDHDLKPGLAVVLVGEDPASQVYVRNKAAQTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECHHHHHH EAGMASFEYKLPADTAEADLLALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKD HHCHHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCC VDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGNLSGLNAVVVGRSNIVGKPAAQLL CCCEEEEECCCEEECHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHH LREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATVIDVGINRVPKAD HHCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCCEECCCCCCCCCEEEECCCCCCCCCC GKTRLVGDVAYEEALGVAGLITPVPGGVGPMTIACLLQNTLTAARRQKGL CCEEEEHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA