| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is artJ [H]
Identifier: 158423696
GI number: 158423696
Start: 2384990
End: 2385760
Strand: Reverse
Name: artJ [H]
Synonym: AZC_2072
Alternate gene names: 158423696
Gene position: 2385760-2384990 (Counterclockwise)
Preceding gene: 158423698
Following gene: 158423695
Centisome position: 44.43
GC content: 64.07
Gene sequence:
>771_bases ATGCCAGAGCGCGGAACAGGAGACAGCATGTTTCTGAAATCTCTCGCCGCTCTGGCGGTCGGCATCGCAGTGGGCTTCTC CGCACCCGTGATGGCGCAGGAGAGCTTCAAGGTGGGCGTCACCACCACCGGCGTTCCCTTCACCTTCGTGGACACCACCA CCCAGCAGCCCACCGGCGCCATGGTGGACCTCGCCAAGGCGATCGCGACCGAAGTCGGCCTGAAGCCCACCTTCGAGCTG ACCGCCTTCTCGGCGCTGGTGCCCTCGCTCAGCACCCACAAGATCGACGTCATCTCCGCCGGCATGCTTGCCACCGACGA GCGCCGCAAGGTCGTGGATTTCAGCGAACCGGTCTATACCTATGGCGACGCCATGTTCGTGGCCGCCGACGCCAAGGATG TCACGCTCGACGACCTCAAGGGCCAGGTGGTGGGCGCGCAGGTGGGCACCACCTTCGCCGACAGCCTAAAGGCCCTGAAC ATCTTCAGCGAAGTGAAGCTCTACGAGAGCATCGCCGACATCATGCGCGACGTGAAGCTCGGCCGCATCAAGGCGGGCTT TGGCGATCAGCCGATCATCGCCTACCAGATCGCCAAGAACCCCGGCCTCGGCGTGCGGCTCGTGAAAGGCTACAAGCCTC TCAAGGAAGGCCAGGTCGCCCTCGCCATCGCCAAGGACAATCCGGCCCTGCTGACCAAGGTCAATGCCGCCATCCTCAAG CTCAAGGCGAGCGGCGAGCTGGACAAGATCTTCGCCGCCTACGGCCTCTGA
Upstream 100 bases:
>100_bases GCGGTTCCGATGCGGACCGGCCAAGGCAGCCCTTTCCTGCTGCCGATCCTTCGAGGCGGAACCAACACGCGCCGGACGGC GAGCGCTTGCGCGCGCCCGG
Downstream 100 bases:
>100_bases TCGACAACGCGGGCGGCGCGCCGCGCCGTCCGTTCCCCGGCCCATCGCGCCGGCAAGTACAGGTGCCGCGACGGCCCGCC GTCGCATCCGTTGGCCCGCC
Product: amino acid ABC transporter
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPERGTGDSMFLKSLAALAVGIAVGFSAPVMAQESFKVGVTTTGVPFTFVDTTTQQPTGAMVDLAKAIATEVGLKPTFEL TAFSALVPSLSTHKIDVISAGMLATDERRKVVDFSEPVYTYGDAMFVAADAKDVTLDDLKGQVVGAQVGTTFADSLKALN IFSEVKLYESIADIMRDVKLGRIKAGFGDQPIIAYQIAKNPGLGVRLVKGYKPLKEGQVALAIAKDNPALLTKVNAAILK LKASGELDKIFAAYGL
Sequences:
>Translated_256_residues MPERGTGDSMFLKSLAALAVGIAVGFSAPVMAQESFKVGVTTTGVPFTFVDTTTQQPTGAMVDLAKAIATEVGLKPTFEL TAFSALVPSLSTHKIDVISAGMLATDERRKVVDFSEPVYTYGDAMFVAADAKDVTLDDLKGQVVGAQVGTTFADSLKALN IFSEVKLYESIADIMRDVKLGRIKAGFGDQPIIAYQIAKNPGLGVRLVKGYKPLKEGQVALAIAKDNPALLTKVNAAILK LKASGELDKIFAAYGL >Mature_255_residues PERGTGDSMFLKSLAALAVGIAVGFSAPVMAQESFKVGVTTTGVPFTFVDTTTQQPTGAMVDLAKAIATEVGLKPTFELT AFSALVPSLSTHKIDVISAGMLATDERRKVVDFSEPVYTYGDAMFVAADAKDVTLDDLKGQVVGAQVGTTFADSLKALNI FSEVKLYESIADIMRDVKLGRIKAGFGDQPIIAYQIAKNPGLGVRLVKGYKPLKEGQVALAIAKDNPALLTKVNAAILKL KASGELDKIFAAYGL
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=239, Percent_Identity=35.5648535564854, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1787088, Length=242, Percent_Identity=30.9917355371901, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1787031, Length=242, Percent_Identity=33.0578512396694, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788228, Length=257, Percent_Identity=28.0155642023346, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1788649, Length=255, Percent_Identity=28.2352941176471, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788648, Length=234, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27009; Mature: 26877
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERGTGDSMFLKSLAALAVGIAVGFSAPVMAQESFKVGVTTTGVPFTFVDTTTQQPTGA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEECCCCEEEEECCCCCCCCH MVDLAKAIATEVGLKPTFELTAFSALVPSLSTHKIDVISAGMLATDERRKVVDFSEPVYT HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCEECCCCCCEE YGDAMFVAADAKDVTLDDLKGQVVGAQVGTTFADSLKALNIFSEVKLYESIADIMRDVKL CCCEEEEEECCCCCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRIKAGFGDQPIIAYQIAKNPGLGVRLVKGYKPLKEGQVALAIAKDNPALLTKVNAAILK CEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECEEEEE LKASGELDKIFAAYGL EECCCCHHHHHHHHCC >Mature Secondary Structure PERGTGDSMFLKSLAALAVGIAVGFSAPVMAQESFKVGVTTTGVPFTFVDTTTQQPTGA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEECCCCEEEEECCCCCCCCH MVDLAKAIATEVGLKPTFELTAFSALVPSLSTHKIDVISAGMLATDERRKVVDFSEPVYT HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCEECCCCCCEE YGDAMFVAADAKDVTLDDLKGQVVGAQVGTTFADSLKALNIFSEVKLYESIADIMRDVKL CCCEEEEEECCCCCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRIKAGFGDQPIIAYQIAKNPGLGVRLVKGYKPLKEGQVALAIAKDNPALLTKVNAAILK CEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECEEEEE LKASGELDKIFAAYGL EECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]